BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0234.0007.p (391 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG60763.1|AF322012_68 ID145 [Bradyrhizobium japonicum] 629 e-178 ref|NP_768419.1| transposase [Bradyrhizobium japonicum USDA 110]... 629 e-178 ref|NP_768352.1| transposase [Bradyrhizobium japonicum USDA 110]... 619 e-175 ref|YP_003065657.1| transposase of ISMex3, IS256 family [Methylo... 593 e-167 ref|ZP_00053133.1| COG3328: Transposase and inactivated derivati... 592 e-167 >gb|AAG60763.1|AF322012_68 ID145 [Bradyrhizobium japonicum] Length = 422 Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust. Identities = 303/392 (77%), Positives = 341/392 (86%), Gaps = 1/392 (0%) Query: 1 LLARAVEIELQAFLETTAELKLPDGRARVVRHGFGPARKIATGIGAIEVARPKVRDRG-A 59 LLA+AVE+E +AFL LK PDGR R+VRHG GP R I TGIGA+EVAR K+RDR Sbjct: 31 LLAQAVEMEAEAFLAAMKGLKRPDGRDRLVRHGHGPVRTIQTGIGAVEVARVKIRDRAVT 90 Query: 60 AGADRIRFTSAILPLWARRTKSLDALIPVLYLRGISTGDFQEALSALLGKDAPNLSPSVI 119 + +RIRFTSAILPLWARRTKSLDAL+PVLYLRGISTGDFQEAL+ALLGKDAPNLSP V+ Sbjct: 91 SDGERIRFTSAILPLWARRTKSLDALLPVLYLRGISTGDFQEALAALLGKDAPNLSPGVV 150 Query: 120 SGLKAQWQGEYERWQNRDLSARRYVYVWADGVFLQARMEDHSECMLVLIGATPEGKKELI 179 S L +WQ EYERWQ RDLSARRYVYVWADGVFLQARMEDHSECMLVLIGATPEGKKELI Sbjct: 151 SRLTTEWQLEYERWQKRDLSARRYVYVWADGVFLQARMEDHSECMLVLIGATPEGKKELI 210 Query: 180 GFQVGVRESAQSWRELLIDIRRRGLQVAPELAVGDGALGFWKALDEVFPGTRRQRCWQHK 239 GFQVGVRES QSW ELL++ + RGL++APE+AVGDGALGFWKALDEVFP TR QRCW HK Sbjct: 211 GFQVGVRESTQSWHELLVEAKTRGLKIAPEIAVGDGALGFWKALDEVFPATRHQRCWVHK 270 Query: 240 TVNVLNKVPSSVQSGMKKALQDICMAPSRAAAELALEAFAEKYGAKYARAVDCLAKDRDD 299 T N+LNKV SVQ+ MKK L+++ +A +RA+AE+A++ FAEKYGAKY +AV+CL KDRD Sbjct: 271 TANILNKVAVSVQASMKKDLREVYLASNRASAEVAIDVFAEKYGAKYDKAVECLTKDRDA 330 Query: 300 LLAFYDFPAEHWIHLRTTNPIESVFATVRHRTVRTKGSLSPQTAKLMVFKLIDAASKTWR 359 +LAFY+FPAEHW HLRTTNPIESVFATVRHRTVRTKGSLS TAKLMVFKL+ AASKTWR Sbjct: 331 MLAFYEFPAEHWDHLRTTNPIESVFATVRHRTVRTKGSLSSTTAKLMVFKLLCAASKTWR 390 Query: 360 RLKGTNQLPKIIAGVRFADGIEVIPTQQSHAA 391 RLKGTNQLPK+ AGVRF +GIEVI ++HAA Sbjct: 391 RLKGTNQLPKVSAGVRFENGIEVIQVPENHAA 422 >ref|NP_768419.1| transposase [Bradyrhizobium japonicum USDA 110] dbj|BAC47044.1| bll1779 [Bradyrhizobium japonicum USDA 110] Length = 435 Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust. Identities = 303/392 (77%), Positives = 341/392 (86%), Gaps = 1/392 (0%) Query: 1 LLARAVEIELQAFLETTAELKLPDGRARVVRHGFGPARKIATGIGAIEVARPKVRDRG-A 59 LLA+AVE+E +AFL LK PDGR R+VRHG GP R I TGIGA+EVAR K+RDR Sbjct: 44 LLAQAVEMEAEAFLAAMKGLKRPDGRDRLVRHGHGPVRTIQTGIGAVEVARVKIRDRAVT 103 Query: 60 AGADRIRFTSAILPLWARRTKSLDALIPVLYLRGISTGDFQEALSALLGKDAPNLSPSVI 119 + +RIRFTSAILPLWARRTKSLDAL+PVLYLRGISTGDFQEAL+ALLGKDAPNLSP V+ Sbjct: 104 SDGERIRFTSAILPLWARRTKSLDALLPVLYLRGISTGDFQEALAALLGKDAPNLSPGVV 163 Query: 120 SGLKAQWQGEYERWQNRDLSARRYVYVWADGVFLQARMEDHSECMLVLIGATPEGKKELI 179 S L +WQ EYERWQ RDLSARRYVYVWADGVFLQARMEDHSECMLVLIGATPEGKKELI Sbjct: 164 SRLTTEWQLEYERWQKRDLSARRYVYVWADGVFLQARMEDHSECMLVLIGATPEGKKELI 223 Query: 180 GFQVGVRESAQSWRELLIDIRRRGLQVAPELAVGDGALGFWKALDEVFPGTRRQRCWQHK 239 GFQVGVRES QSW ELL++ + RGL++APE+AVGDGALGFWKALDEVFP TR QRCW HK Sbjct: 224 GFQVGVRESTQSWHELLVEAKTRGLKIAPEIAVGDGALGFWKALDEVFPATRHQRCWVHK 283 Query: 240 TVNVLNKVPSSVQSGMKKALQDICMAPSRAAAELALEAFAEKYGAKYARAVDCLAKDRDD 299 T N+LNKV SVQ+ MKK L+++ +A +RA+AE+A++ FAEKYGAKY +AV+CL KDRD Sbjct: 284 TANILNKVAVSVQASMKKDLREVYLASNRASAEVAIDVFAEKYGAKYDKAVECLTKDRDA 343 Query: 300 LLAFYDFPAEHWIHLRTTNPIESVFATVRHRTVRTKGSLSPQTAKLMVFKLIDAASKTWR 359 +LAFY+FPAEHW HLRTTNPIESVFATVRHRTVRTKGSLS TAKLMVFKL+ AASKTWR Sbjct: 344 MLAFYEFPAEHWDHLRTTNPIESVFATVRHRTVRTKGSLSSTTAKLMVFKLLCAASKTWR 403 Query: 360 RLKGTNQLPKIIAGVRFADGIEVIPTQQSHAA 391 RLKGTNQLPK+ AGVRF +GIEVI ++HAA Sbjct: 404 RLKGTNQLPKVSAGVRFENGIEVIQVPENHAA 435 >ref|NP_768352.1| transposase [Bradyrhizobium japonicum USDA 110] dbj|BAC46977.1| blr1712 [Bradyrhizobium japonicum USDA 110] Length = 385 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 297/385 (77%), Positives = 334/385 (86%), Gaps = 1/385 (0%) Query: 8 IELQAFLETTAELKLPDGRARVVRHGFGPARKIATGIGAIEVARPKVRDRG-AAGADRIR 66 +E +AFL LK PDGR R+VRHG GP R I TGIGA+EVAR K+RDR + +RIR Sbjct: 1 MEAEAFLAAMKGLKRPDGRDRLVRHGHGPVRTIQTGIGAVEVARVKIRDRAVTSDGERIR 60 Query: 67 FTSAILPLWARRTKSLDALIPVLYLRGISTGDFQEALSALLGKDAPNLSPSVISGLKAQW 126 FTSAILPLWARRTKSLDAL+PVLYLRGISTGDFQEAL+ALLGKDAPNLSP V+S L +W Sbjct: 61 FTSAILPLWARRTKSLDALLPVLYLRGISTGDFQEALAALLGKDAPNLSPGVVSRLTTEW 120 Query: 127 QGEYERWQNRDLSARRYVYVWADGVFLQARMEDHSECMLVLIGATPEGKKELIGFQVGVR 186 Q EYERWQ RDLSARRYVYVWADGVFLQARMEDHSECMLVLIGATPEGKKELIGFQVGVR Sbjct: 121 QLEYERWQKRDLSARRYVYVWADGVFLQARMEDHSECMLVLIGATPEGKKELIGFQVGVR 180 Query: 187 ESAQSWRELLIDIRRRGLQVAPELAVGDGALGFWKALDEVFPGTRRQRCWQHKTVNVLNK 246 ES QSW ELL++ + RGL++APE+AVGDGALGFWKALDEVFP TR QRCW HKT N+LNK Sbjct: 181 ESTQSWHELLVEAKTRGLKIAPEIAVGDGALGFWKALDEVFPATRHQRCWVHKTANILNK 240 Query: 247 VPSSVQSGMKKALQDICMAPSRAAAELALEAFAEKYGAKYARAVDCLAKDRDDLLAFYDF 306 V SVQ+ MKK L+++ +A +RA+AE+A++ FAEKYGAKY +AV+CL KDRD +LAFY+F Sbjct: 241 VAVSVQASMKKDLREVYLASNRASAEVAIDVFAEKYGAKYDKAVECLTKDRDAMLAFYEF 300 Query: 307 PAEHWIHLRTTNPIESVFATVRHRTVRTKGSLSPQTAKLMVFKLIDAASKTWRRLKGTNQ 366 PAEHW HLRTTNPIESVFATVRHRTVRTKGSLS TAKLMVFKL+ AASKTWRRLKGTNQ Sbjct: 301 PAEHWDHLRTTNPIESVFATVRHRTVRTKGSLSSTTAKLMVFKLLCAASKTWRRLKGTNQ 360 Query: 367 LPKIIAGVRFADGIEVIPTQQSHAA 391 LPK+ AGVRF +GIEVI ++HAA Sbjct: 361 LPKVSAGVRFENGIEVIQVPENHAA 385 >ref|YP_003065657.1| transposase of ISMex3, IS256 family [Methylobacterium extorquens DM4] ref|YP_003071362.1| transposase of ISMex3, IS256 family [Methylobacterium extorquens DM4] emb|CAX17010.1| transposase of ISMex3, IS256 family [Methylobacterium extorquens DM4] emb|CAX17144.1| transposase of ISMex3, IS256 family [Methylobacterium extorquens DM4] Length = 436 Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust. Identities = 292/392 (74%), Positives = 332/392 (84%), Gaps = 1/392 (0%) Query: 1 LLARAVEIELQAFLETTAELKLPDGRARVVRHGFGPARKIATGIGAIEVARPKVRDRGAA 60 LLA+AVE+E AFL +L+LPDGRAR+VRHG GP R I TGIG + VAR +VRDRGA+ Sbjct: 45 LLAQAVEMEADAFLSAMQDLRLPDGRARLVRHGHGPERAIQTGIGPVPVARVRVRDRGAS 104 Query: 61 GA-DRIRFTSAILPLWARRTKSLDALIPVLYLRGISTGDFQEALSALLGKDAPNLSPSVI 119 G+ DR+RFTS +LP WARRT+SLDAL+PVLYLRG+STGDFQEAL+ALLG+DAPNLSP+VI Sbjct: 105 GSEDRVRFTSTLLPKWARRTRSLDALLPVLYLRGVSTGDFQEALAALLGRDAPNLSPAVI 164 Query: 120 SGLKAQWQGEYERWQNRDLSARRYVYVWADGVFLQARMEDHSECMLVLIGATPEGKKELI 179 + L A W EY RWQ RDLSARRYVYVWADGV+LQARMED +ECMLVLIGATPEG+KEL+ Sbjct: 165 ARLTAAWADEYARWQGRDLSARRYVYVWADGVYLQARMEDQAECMLVLIGATPEGRKELV 224 Query: 180 GFQVGVRESAQSWRELLIDIRRRGLQVAPELAVGDGALGFWKALDEVFPGTRRQRCWQHK 239 GFQVGVRESAQSWRELL+D++RRGL +APE+AVGDGALGFW+ALDEVFPGT QRCW HK Sbjct: 225 GFQVGVRESAQSWRELLVDVKRRGLSIAPEIAVGDGALGFWQALDEVFPGTAHQRCWVHK 284 Query: 240 TVNVLNKVPSSVQSGMKKALQDICMAPSRAAAELALEAFAEKYGAKYARAVDCLAKDRDD 299 NVL+KVP SVQ MK L++I AP+RAAAE AL F EKYGAKY RA CL KDR+ Sbjct: 285 AANVLDKVPKSVQGAMKVDLREIHGAPTRAAAEAALAVFVEKYGAKYPRAATCLTKDREA 344 Query: 300 LLAFYDFPAEHWIHLRTTNPIESVFATVRHRTVRTKGSLSPQTAKLMVFKLIDAASKTWR 359 LLAFYDFPAEHW HLR++NPIESVFATVRHRTVRTKG+LS TAKLMVFKL+ AASKTWR Sbjct: 345 LLAFYDFPAEHWDHLRSSNPIESVFATVRHRTVRTKGALSATTAKLMVFKLVMAASKTWR 404 Query: 360 RLKGTNQLPKIIAGVRFADGIEVIPTQQSHAA 391 RLKG NQLPK++AGV F DG EV + AA Sbjct: 405 RLKGENQLPKVVAGVIFRDGTEVTASPDHRAA 436 >ref|ZP_00053133.1| COG3328: Transposase and inactivated derivatives [Magnetospirillum magnetotacticum MS-1] ref|YP_002418939.1| transposase mutator type [Methylobacterium chloromethanicum CM4] ref|YP_002419945.1| transposase mutator type [Methylobacterium chloromethanicum CM4] gb|ACK81011.1| transposase mutator type [Methylobacterium chloromethanicum CM4] gb|ACK82017.1| transposase mutator type [Methylobacterium chloromethanicum CM4] Length = 422 Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust. Identities = 292/392 (74%), Positives = 332/392 (84%), Gaps = 1/392 (0%) Query: 1 LLARAVEIELQAFLETTAELKLPDGRARVVRHGFGPARKIATGIGAIEVARPKVRDRGAA 60 LLA+AVE+E AFL +L+LPDGRAR+VRHG GP R I TGIG + VAR +VRDRGA+ Sbjct: 31 LLAQAVEMEADAFLSAMQDLRLPDGRARLVRHGHGPERAIQTGIGPVPVARVRVRDRGAS 90 Query: 61 GA-DRIRFTSAILPLWARRTKSLDALIPVLYLRGISTGDFQEALSALLGKDAPNLSPSVI 119 G+ DR+RFTS +LP WARRT+SLDAL+PVLYLRG+STGDFQEAL+ALLG+DAPNLSP+VI Sbjct: 91 GSEDRVRFTSTLLPKWARRTRSLDALLPVLYLRGVSTGDFQEALAALLGRDAPNLSPAVI 150 Query: 120 SGLKAQWQGEYERWQNRDLSARRYVYVWADGVFLQARMEDHSECMLVLIGATPEGKKELI 179 + L A W EY RWQ RDLSARRYVYVWADGV+LQARMED +ECMLVLIGATPEG+KEL+ Sbjct: 151 ARLTAAWADEYARWQGRDLSARRYVYVWADGVYLQARMEDQAECMLVLIGATPEGRKELV 210 Query: 180 GFQVGVRESAQSWRELLIDIRRRGLQVAPELAVGDGALGFWKALDEVFPGTRRQRCWQHK 239 GFQVGVRESAQSWRELL+D++RRGL +APE+AVGDGALGFW+ALDEVFPGT QRCW HK Sbjct: 211 GFQVGVRESAQSWRELLVDVKRRGLSIAPEIAVGDGALGFWQALDEVFPGTAHQRCWVHK 270 Query: 240 TVNVLNKVPSSVQSGMKKALQDICMAPSRAAAELALEAFAEKYGAKYARAVDCLAKDRDD 299 NVL+KVP SVQ MK L++I AP+RAAAE AL F EKYGAKY RA CL KDR+ Sbjct: 271 AANVLDKVPKSVQGAMKVDLREIHGAPTRAAAEAALAVFVEKYGAKYPRAATCLTKDREA 330 Query: 300 LLAFYDFPAEHWIHLRTTNPIESVFATVRHRTVRTKGSLSPQTAKLMVFKLIDAASKTWR 359 LLAFYDFPAEHW HLR++NPIESVFATVRHRTVRTKG+LS TAKLMVFKL+ AASKTWR Sbjct: 331 LLAFYDFPAEHWDHLRSSNPIESVFATVRHRTVRTKGALSATTAKLMVFKLVMAASKTWR 390 Query: 360 RLKGTNQLPKIIAGVRFADGIEVIPTQQSHAA 391 RLKG NQLPK++AGV F DG EV + AA Sbjct: 391 RLKGENQLPKVVAGVIFRDGTEVTASPDHRAA 422