BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0233.0007.p (438 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768358.1| C4-dicarboxylate transport protein [Bradyrhizob... 790 0.0 ref|YP_001240168.1| C4-dicarboxylate transport protein [Bradyrhi... 714 0.0 ref|YP_001205518.1| C4-dicarboxylate transport protein [Bradyrhi... 709 0.0 ref|YP_532726.1| sodium:dicarboxylate symporter [Rhodopseudomona... 702 0.0 ref|YP_486623.1| Sodium:dicarboxylate symporter [Rhodopseudomona... 701 0.0 >ref|NP_768358.1| C4-dicarboxylate transport protein [Bradyrhizobium japonicum USDA 110] sp|Q9ANR2.1|DCTA1_BRAJA RecName: Full=C4-dicarboxylate transport protein 1 gb|AAG60701.1|AF322012_6 DctA [Bradyrhizobium japonicum] dbj|BAC46983.1| C4-dicarboxylate transport protein [Bradyrhizobium japonicum USDA 110] Length = 438 Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/438 (91%), Positives = 414/438 (94%), Gaps = 2/438 (0%) Query: 1 MTTMATAAPARASQTWYKILYVQVLIAIVIGAIVGWLWPSVATNDWVKALGDGFIKLIKM 60 MTTMATAAP RASQ WYKILYVQVLIAI+IGA+VG LWPSVATNDWVKALGDGFIKLIKM Sbjct: 1 MTTMATAAPVRASQAWYKILYVQVLIAILIGAMVGCLWPSVATNDWVKALGDGFIKLIKM 60 Query: 61 VIAPIIFCTVASGIAHIQDAKKVGRVGVKALVYFEIVSSFALVLGLVMGNLVQIGHGLAV 120 VIAPIIFCTV SGIAHIQDAKKVG VGVKAL YFEIVSSFAL+LGL MGNLV+IGHGLAV Sbjct: 61 VIAPIIFCTVTSGIAHIQDAKKVGCVGVKALFYFEIVSSFALLLGLAMGNLVRIGHGLAV 120 Query: 121 KPDAAAVANYVKQAEASKTVDFFLNIIPDTVVGALARGDVLQVLLFAILFGFSLMALGER 180 KPDAAAVANYVKQAEASKTVDF LNIIPD+VVGA ARGDVLQVLLFAILFGFSLMALG+R Sbjct: 121 KPDAAAVANYVKQAEASKTVDFILNIIPDSVVGAFARGDVLQVLLFAILFGFSLMALGKR 180 Query: 181 GERLRGMIDDVAHAVFGVIAIIMKAAPIGAFGAMAFTIGKFGPAALGNLIGLIVLFYATA 240 GERLRGMIDDVAHAVFGVIAI+MKAAPIGAFGAMAFT+GKFGPAALGNLIGLI LFY TA Sbjct: 181 GERLRGMIDDVAHAVFGVIAIVMKAAPIGAFGAMAFTVGKFGPAALGNLIGLIALFYVTA 240 Query: 241 AIFVVVVLGLIARIVGFSIFKFIIYIKDELLIVLGTSSSESALPQLMEKLERLGCSKPVV 300 A+FVVVVLGLIAR+VGFSIFKF+IYIKDELLIVLGTSSSESALPQLMEKLERLGCSKPVV Sbjct: 241 ALFVVVVLGLIARLVGFSIFKFLIYIKDELLIVLGTSSSESALPQLMEKLERLGCSKPVV 300 Query: 301 GLVVPTGYSFNLDGTNIYMTLATLFIAQALGVDLTFGQQLTILLVAMLTSKGASGVTGAG 360 GLVVPTGYSFNLDGTNIYMTLATLFIAQALGVDL+FGQQLTILLVAMLTSKGASGVTGAG Sbjct: 301 GLVVPTGYSFNLDGTNIYMTLATLFIAQALGVDLSFGQQLTILLVAMLTSKGASGVTGAG 360 Query: 361 FITLAATLSVVNPALVPGMAIVFSIDKFMSEVRALTNITGNGIAAVFVSWWEGELDDATL 420 FITLAATLSVVNPALVPGMAIVFSIDKFMSEVRALTNI GNGIAAVFVSWWE ELD TL Sbjct: 361 FITLAATLSVVNPALVPGMAIVFSIDKFMSEVRALTNIIGNGIAAVFVSWWESELDHVTL 420 Query: 421 HARLEQPTAGA--DTRSS 436 RL + TA DT S+ Sbjct: 421 QTRLNKSTASTTIDTTST 438 >ref|YP_001240168.1| C4-dicarboxylate transport protein [Bradyrhizobium sp. BTAi1] gb|ABQ36262.1| C4-dicarboxylate transport protein [Bradyrhizobium sp. BTAi1] Length = 445 Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/425 (83%), Positives = 392/425 (92%) Query: 12 ASQTWYKILYVQVLIAIVIGAIVGWLWPSVATNDWVKALGDGFIKLIKMVIAPIIFCTVA 71 A + WY ILY+QVLIAIVIG +VGWL+P++ATNDW+KALGDGFIKLIKMVIAPIIFCTV Sbjct: 17 AKKPWYGILYIQVLIAIVIGVLVGWLFPNLATNDWIKALGDGFIKLIKMVIAPIIFCTVV 76 Query: 72 SGIAHIQDAKKVGRVGVKALVYFEIVSSFALVLGLVMGNLVQIGHGLAVKPDAAAVANYV 131 SGIAHI+ A KVGRVG+KAL+YFEIVS+FAL++GL++GNL IGHGLA K DAAAVA YV Sbjct: 77 SGIAHIESASKVGRVGIKALIYFEIVSTFALLIGLIVGNLAPIGHGLAEKQDAAAVAGYV 136 Query: 132 KQAEASKTVDFFLNIIPDTVVGALARGDVLQVLLFAILFGFSLMALGERGERLRGMIDDV 191 KQA+A K+VDF LNIIPD+VVGALARGD+LQVLLFAILFGF+LMALGERG RLR +IDD Sbjct: 137 KQAQAQKSVDFVLNIIPDSVVGALARGDILQVLLFAILFGFALMALGERGHRLRDVIDDT 196 Query: 192 AHAVFGVIAIIMKAAPIGAFGAMAFTIGKFGPAALGNLIGLIVLFYATAAIFVVVVLGLI 251 AHAVFGVIAI+MKAAP+GAFGAMA+TIGK+GP+ALG+LIGLIV+FY +AA+FVV+VLGLI Sbjct: 197 AHAVFGVIAIVMKAAPVGAFGAMAYTIGKYGPSALGDLIGLIVVFYVSAALFVVIVLGLI 256 Query: 252 ARIVGFSIFKFIIYIKDELLIVLGTSSSESALPQLMEKLERLGCSKPVVGLVVPTGYSFN 311 AR VGFSIFKFI YIKDELLIVLGTSSSESALPQLMEKLERLGCSKPVVGLVVPTGYSFN Sbjct: 257 ARFVGFSIFKFISYIKDELLIVLGTSSSESALPQLMEKLERLGCSKPVVGLVVPTGYSFN 316 Query: 312 LDGTNIYMTLATLFIAQALGVDLTFGQQLTILLVAMLTSKGASGVTGAGFITLAATLSVV 371 LDGTNIYMTLATLFIA ALGV+LT+GQQLTILLVAMLTSKGASGVTGAGFITLAATLSVV Sbjct: 317 LDGTNIYMTLATLFIAHALGVELTWGQQLTILLVAMLTSKGASGVTGAGFITLAATLSVV 376 Query: 372 NPALVPGMAIVFSIDKFMSEVRALTNITGNGIAAVFVSWWEGELDDATLHARLEQPTAGA 431 NPALVPGMAIVFSIDKFMSEVRALTNITGNGIAAVFVSWWEGELD L RL + + Sbjct: 377 NPALVPGMAIVFSIDKFMSEVRALTNITGNGIAAVFVSWWEGELDHDLLQKRLNREIDPS 436 Query: 432 DTRSS 436 D ++ Sbjct: 437 DVETA 441 >ref|YP_001205518.1| C4-dicarboxylate transport protein [Bradyrhizobium sp. ORS 278] sp|A4YTR6.1|DCTA2_BRASO RecName: Full=C4-dicarboxylate transport protein 2 emb|CAL77292.1| C4-dicarboxylate transport protein [Bradyrhizobium sp. ORS 278] Length = 445 Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/424 (85%), Positives = 392/424 (92%) Query: 13 SQTWYKILYVQVLIAIVIGAIVGWLWPSVATNDWVKALGDGFIKLIKMVIAPIIFCTVAS 72 + WY ILYVQVLIAI+IG +VGWL+P++ATNDW+KALGDGFIKLIKMVIAPIIFCTV S Sbjct: 18 KKPWYSILYVQVLIAILIGIVVGWLFPNLATNDWIKALGDGFIKLIKMVIAPIIFCTVVS 77 Query: 73 GIAHIQDAKKVGRVGVKALVYFEIVSSFALVLGLVMGNLVQIGHGLAVKPDAAAVANYVK 132 GIAHIQ+A KVGRVGVKALVYFEIVS+FAL+LGL++GNL IGHGLA KPDAAAVANYVK Sbjct: 78 GIAHIQNASKVGRVGVKALVYFEIVSTFALLLGLIVGNLAPIGHGLAAKPDAAAVANYVK 137 Query: 133 QAEASKTVDFFLNIIPDTVVGALARGDVLQVLLFAILFGFSLMALGERGERLRGMIDDVA 192 QAEA K+VDF LNIIPD+VVGALARGD+LQVLLFAILFGF+LMALGERG RLR +IDD A Sbjct: 138 QAEAQKSVDFVLNIIPDSVVGALARGDILQVLLFAILFGFALMALGERGHRLRDIIDDTA 197 Query: 193 HAVFGVIAIIMKAAPIGAFGAMAFTIGKFGPAALGNLIGLIVLFYATAAIFVVVVLGLIA 252 HAVFGVIAI+MKAAP+GAFGAMAFTIGK+GPAALGNLIGLI LFY TA +FVV+VLGLIA Sbjct: 198 HAVFGVIAIVMKAAPVGAFGAMAFTIGKYGPAALGNLIGLIALFYITAGLFVVIVLGLIA 257 Query: 253 RIVGFSIFKFIIYIKDELLIVLGTSSSESALPQLMEKLERLGCSKPVVGLVVPTGYSFNL 312 R +GFSIFKF+ YIKDELLIVLGTSSSESALPQLMEKLERLGCSKPVVGLVVPTGYSFNL Sbjct: 258 RFIGFSIFKFVAYIKDELLIVLGTSSSESALPQLMEKLERLGCSKPVVGLVVPTGYSFNL 317 Query: 313 DGTNIYMTLATLFIAQALGVDLTFGQQLTILLVAMLTSKGASGVTGAGFITLAATLSVVN 372 DGTNIYMTLATLFI+QALGVDL+F QQ+TIL+VAMLTSKGASGVTGAGFITLAATLSVVN Sbjct: 318 DGTNIYMTLATLFISQALGVDLSFSQQVTILIVAMLTSKGASGVTGAGFITLAATLSVVN 377 Query: 373 PALVPGMAIVFSIDKFMSEVRALTNITGNGIAAVFVSWWEGELDDATLHARLEQPTAGAD 432 PALVPGMAIVFSIDKFMSEVRALTNITGNGIAAVFVSWWEGELD L RL Q +D Sbjct: 378 PALVPGMAIVFSIDKFMSEVRALTNITGNGIAAVFVSWWEGELDHDLLQRRLNQQIDPSD 437 Query: 433 TRSS 436 ++ Sbjct: 438 VETA 441 >ref|YP_532726.1| sodium:dicarboxylate symporter [Rhodopseudomonas palustris BisB18] sp|Q213M9.1|DCTA_RHOPB RecName: Full=C4-dicarboxylate transport protein gb|ABD88407.1| sodium:dicarboxylate symporter [Rhodopseudomonas palustris BisB18] Length = 449 Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/432 (80%), Positives = 390/432 (90%) Query: 5 ATAAPARASQTWYKILYVQVLIAIVIGAIVGWLWPSVATNDWVKALGDGFIKLIKMVIAP 64 A + P A + WYK+LY+QVL+AIV+G ++GWL P +ATN+WVKALGDGF+KLIKMVIAP Sbjct: 14 AKSKPPAARKPWYKLLYLQVLVAIVLGVLLGWLSPHIATNEWVKALGDGFVKLIKMVIAP 73 Query: 65 IIFCTVASGIAHIQDAKKVGRVGVKALVYFEIVSSFALVLGLVMGNLVQIGHGLAVKPDA 124 IIFCTV SGIAHIQDA+KVGRVGVKAL+YFE+VSSFAL++GLV+GN+VQIGHGL DA Sbjct: 74 IIFCTVVSGIAHIQDARKVGRVGVKALLYFEVVSSFALLIGLVVGNVVQIGHGLGATGDA 133 Query: 125 AAVANYVKQAEASKTVDFFLNIIPDTVVGALARGDVLQVLLFAILFGFSLMALGERGERL 184 AAV+ YVKQAEA +VDF LNIIPD+VVGA A+GD+LQVLLFAILFGF+LM LGERG RL Sbjct: 134 AAVSKYVKQAEAQHSVDFVLNIIPDSVVGAFAKGDILQVLLFAILFGFALMTLGERGHRL 193 Query: 185 RGMIDDVAHAVFGVIAIIMKAAPIGAFGAMAFTIGKFGPAALGNLIGLIVLFYATAAIFV 244 R +IDD +HAVFGVIAI+MKAAP+GAFGAMAFTIGKFGPAALGNLIGLI +FY TAA+FV Sbjct: 194 RDVIDDASHAVFGVIAIVMKAAPVGAFGAMAFTIGKFGPAALGNLIGLIAVFYITAALFV 253 Query: 245 VVVLGLIARIVGFSIFKFIIYIKDELLIVLGTSSSESALPQLMEKLERLGCSKPVVGLVV 304 V+VLGLIA+IVGF+IFKF+ YIKDELLIVLGTSSSESALPQLMEKLERLGCSK VVGLVV Sbjct: 254 VLVLGLIAKIVGFNIFKFLKYIKDELLIVLGTSSSESALPQLMEKLERLGCSKSVVGLVV 313 Query: 305 PTGYSFNLDGTNIYMTLATLFIAQALGVDLTFGQQLTILLVAMLTSKGASGVTGAGFITL 364 PTGYSFNLDGTNIYMTLATLFIAQALGVDLT+ +QLTILLVAMLTSKGASGV+GAGFITL Sbjct: 314 PTGYSFNLDGTNIYMTLATLFIAQALGVDLTWTEQLTILLVAMLTSKGASGVSGAGFITL 373 Query: 365 AATLSVVNPALVPGMAIVFSIDKFMSEVRALTNITGNGIAAVFVSWWEGELDDATLHARL 424 AATLSVVNPALVPGMAIVFS+DKFMSEVRALTNITGNG+A VFVSWWE ELD L A L Sbjct: 374 AATLSVVNPALVPGMAIVFSVDKFMSEVRALTNITGNGVATVFVSWWENELDHDKLAAAL 433 Query: 425 EQPTAGADTRSS 436 + +D ++ Sbjct: 434 NKTIDPSDIETA 445 >ref|YP_486623.1| Sodium:dicarboxylate symporter [Rhodopseudomonas palustris HaA2] sp|Q2IVP8.1|DCTA_RHOP2 RecName: Full=C4-dicarboxylate transport protein gb|ABD07712.1| Sodium:dicarboxylate symporter [Rhodopseudomonas palustris HaA2] Length = 445 Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/442 (78%), Positives = 393/442 (88%), Gaps = 7/442 (1%) Query: 1 MTTMA------TAAPARASQTWYKILYVQVLIAIVIGAIVGWLWPSVATNDWVKALGDGF 54 M+TM T+ P+ A + WYK+LY+QVLIAIV+G +VGWL P +ATN W+KALGDGF Sbjct: 1 MSTMTDVGVPETSRPSNA-KPWYKVLYIQVLIAIVLGVLVGWLSPHLATNPWIKALGDGF 59 Query: 55 IKLIKMVIAPIIFCTVASGIAHIQDAKKVGRVGVKALVYFEIVSSFALVLGLVMGNLVQI 114 +KLIKMVIAPIIFCTV SGIAHIQDA+KVGRVG+KALVYFE+VSSFAL+LGLV+GNL+ + Sbjct: 60 VKLIKMVIAPIIFCTVVSGIAHIQDARKVGRVGIKALVYFEVVSSFALILGLVVGNLLPV 119 Query: 115 GHGLAVKPDAAAVANYVKQAEASKTVDFFLNIIPDTVVGALARGDVLQVLLFAILFGFSL 174 GHGLA KPDA AVA YV QA VDFFLNIIP++VVGA A+GD+LQVLLFAILFGF+L Sbjct: 120 GHGLAAKPDAGAVAKYVDQASHMHAVDFFLNIIPESVVGAFAKGDILQVLLFAILFGFAL 179 Query: 175 MALGERGERLRGMIDDVAHAVFGVIAIIMKAAPIGAFGAMAFTIGKFGPAALGNLIGLIV 234 MALGERG RLR +IDD AHAVFGVIAI+MKAAP+GAFGAMAFTIGK+GPAALGNLIGL+ Sbjct: 180 MALGERGHRLRDVIDDTAHAVFGVIAIVMKAAPVGAFGAMAFTIGKYGPAALGNLIGLVA 239 Query: 235 LFYATAAIFVVVVLGLIARIVGFSIFKFIIYIKDELLIVLGTSSSESALPQLMEKLERLG 294 LFYATAA+FV VVLG+IA+ VGF+IFKF+ YIKDELLIVLGTSSSESALPQLMEKLERLG Sbjct: 240 LFYATAALFVFVVLGVIAKFVGFNIFKFLGYIKDELLIVLGTSSSESALPQLMEKLERLG 299 Query: 295 CSKPVVGLVVPTGYSFNLDGTNIYMTLATLFIAQALGVDLTFGQQLTILLVAMLTSKGAS 354 CSK VVGLVVPTGYSFNLDGTNIYMTLATLFIAQALG++L+F +Q+TILLVAMLTSKGAS Sbjct: 300 CSKSVVGLVVPTGYSFNLDGTNIYMTLATLFIAQALGIELSFSEQVTILLVAMLTSKGAS 359 Query: 355 GVTGAGFITLAATLSVVNPALVPGMAIVFSIDKFMSEVRALTNITGNGIAAVFVSWWEGE 414 GVTGAGF+TLA TL+ VNPALVPGMAIVFSIDKFMSEVRALTNITGNG+A VFVSWWEGE Sbjct: 360 GVTGAGFVTLAGTLAAVNPALVPGMAIVFSIDKFMSEVRALTNITGNGVATVFVSWWEGE 419 Query: 415 LDDATLHARLEQPTAGADTRSS 436 LD LHA L++ +D ++ Sbjct: 420 LDHDRLHANLDKTIDPSDVETA 441