BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0232.0008.p         (224 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_577524.1| transposase IS116/IS110/IS902 [Nitrobacter hamb...   310   9e-83
ref|YP_578264.1| transposase IS116/IS110/IS902 [Nitrobacter hamb...   310   9e-83
ref|ZP_03503927.1| transposase IS116/IS110/IS902 [Rhizobium etli...   296   1e-78
ref|YP_001768174.1| transposase IS116/IS110/IS902 family protein...   296   1e-78
ref|NP_444032.1| transposase of degenerate insertion sequence NG...   294   7e-78

>ref|YP_577524.1| transposase IS116/IS110/IS902 [Nitrobacter hamburgensis X14]
 gb|ABE63064.1| transposase IS116/IS110/IS902 [Nitrobacter hamburgensis X14]
          Length = 371

 Score =  310 bits (795), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 142/171 (83%), Positives = 161/171 (94%)

Query: 1   VAKLRNAIAIADAGREGEVRFFGEVDASATNMRRVLGRIANRFDRVHFCYEAGPTGYGLY 60
           VAKL+NA+A+AD GR GE+R+FGEV++S  +MRR + RIA+RFD V+FCYEAGPTGYGLY
Sbjct: 13  VAKLKNAVAVADGGRNGEIRYFGEVESSDASMRRAIQRIASRFDHVYFCYEAGPTGYGLY 72

Query: 61  RLIRSLGHQCTVVAPSLIPRKPGDRVKTNRRDAVSLARLLRAGELTAVWVPDEGHEAMRD 120
           RLIRSLG+ C VVAPSLIPRKPGDRVKTNRRD++SLARLLRAGELTAVWVPDEGHEAMRD
Sbjct: 73  RLIRSLGYDCLVVAPSLIPRKPGDRVKTNRRDSLSLARLLRAGELTAVWVPDEGHEAMRD 132

Query: 121 LVRARSAAVETLRIHRQQVSAFMLKHGRTYPRKKGWTMRYLRWLQEQQFDH 171
           LVRAR+AAVETLR+HRQQ+SAFMLKHGR YPRKKGWTMRYLRWLQEQ+F+H
Sbjct: 133 LVRARAAAVETLRVHRQQISAFMLKHGRIYPRKKGWTMRYLRWLQEQKFEH 183


>ref|YP_578264.1| transposase IS116/IS110/IS902 [Nitrobacter hamburgensis X14]
 gb|ABE63804.1| transposase IS116/IS110/IS902 [Nitrobacter hamburgensis X14]
          Length = 403

 Score =  310 bits (795), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 142/171 (83%), Positives = 161/171 (94%)

Query: 1   VAKLRNAIAIADAGREGEVRFFGEVDASATNMRRVLGRIANRFDRVHFCYEAGPTGYGLY 60
           VAKL+NA+A+AD GR GE+R+FGEV++S  +MRR + RIA+RFD V+FCYEAGPTGYGLY
Sbjct: 45  VAKLKNAVAVADGGRNGEIRYFGEVESSDASMRRAIQRIASRFDHVYFCYEAGPTGYGLY 104

Query: 61  RLIRSLGHQCTVVAPSLIPRKPGDRVKTNRRDAVSLARLLRAGELTAVWVPDEGHEAMRD 120
           RLIRSLG+ C VVAPSLIPRKPGDRVKTNRRD++SLARLLRAGELTAVWVPDEGHEAMRD
Sbjct: 105 RLIRSLGYDCLVVAPSLIPRKPGDRVKTNRRDSLSLARLLRAGELTAVWVPDEGHEAMRD 164

Query: 121 LVRARSAAVETLRIHRQQVSAFMLKHGRTYPRKKGWTMRYLRWLQEQQFDH 171
           LVRAR+AAVETLR+HRQQ+SAFMLKHGR YPRKKGWTMRYLRWLQEQ+F+H
Sbjct: 165 LVRARAAAVETLRVHRQQISAFMLKHGRIYPRKKGWTMRYLRWLQEQKFEH 215


>ref|ZP_03503927.1| transposase IS116/IS110/IS902 [Rhizobium etli Kim 5]
          Length = 420

 Score =  296 bits (759), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 149/171 (87%), Positives = 165/171 (96%)

Query: 1   VAKLRNAIAIADAGREGEVRFFGEVDASATNMRRVLGRIANRFDRVHFCYEAGPTGYGLY 60
           VAKL+NAIA+A++GREGEVRF+GEVDAS T+MRR++ RIA +FDRVHFCYEAGPTGYGL+
Sbjct: 13  VAKLKNAIAVAESGREGEVRFWGEVDASDTSMRRIIQRIAAKFDRVHFCYEAGPTGYGLH 72

Query: 61  RLIRSLGHQCTVVAPSLIPRKPGDRVKTNRRDAVSLARLLRAGELTAVWVPDEGHEAMRD 120
           RLIRSLGH+C VVAPSLIPRKPGDRVKTNRRDA++LARLLRAGELTAVWVPDEGHEAMRD
Sbjct: 73  RLIRSLGHECVVVAPSLIPRKPGDRVKTNRRDALALARLLRAGELTAVWVPDEGHEAMRD 132

Query: 121 LVRARSAAVETLRIHRQQVSAFMLKHGRTYPRKKGWTMRYLRWLQEQQFDH 171
           LVRAR+AAVETLR+HRQQ+SAFMLKH R YPRKKGWTMRYLRWLQEQQFDH
Sbjct: 133 LVRARAAAVETLRVHRQQISAFMLKHSRIYPRKKGWTMRYLRWLQEQQFDH 183


>ref|YP_001768174.1| transposase IS116/IS110/IS902 family protein [Methylobacterium sp.
           4-46]
 ref|YP_001769676.1| transposase IS116/IS110/IS902 family protein [Methylobacterium sp.
           4-46]
 gb|ACA15740.1| transposase IS116/IS110/IS902 family protein [Methylobacterium sp.
           4-46]
 gb|ACA17242.1| transposase IS116/IS110/IS902 family protein [Methylobacterium sp.
           4-46]
          Length = 369

 Score =  296 bits (758), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 137/171 (80%), Positives = 157/171 (91%)

Query: 1   VAKLRNAIAIADAGREGEVRFFGEVDASATNMRRVLGRIANRFDRVHFCYEAGPTGYGLY 60
           V+K+RNA+A+AD  R GEVR+ GEVDAS  +MRR++ R+A + +R+HFCYEAGPTGYGL+
Sbjct: 13  VSKMRNAVAVADGERGGEVRYLGEVDASPESMRRLVRRLAGQHERLHFCYEAGPTGYGLH 72

Query: 61  RLIRSLGHQCTVVAPSLIPRKPGDRVKTNRRDAVSLARLLRAGELTAVWVPDEGHEAMRD 120
           RLI  LGH C+VVAPSLIPRKPGDRVKTNRRDAV+LA+LLRAGELTAVWVPDEGHEAMRD
Sbjct: 73  RLITELGHSCSVVAPSLIPRKPGDRVKTNRRDAVALAKLLRAGELTAVWVPDEGHEAMRD 132

Query: 121 LVRARSAAVETLRIHRQQVSAFMLKHGRTYPRKKGWTMRYLRWLQEQQFDH 171
           LVRAR+AAVE+LR+HRQQVSAFMLKHGR YPRKKGWTMRYL WLQEQ+FDH
Sbjct: 133 LVRARAAAVESLRVHRQQVSAFMLKHGRVYPRKKGWTMRYLCWLQEQRFDH 183


>ref|NP_444032.1| transposase of degenerate insertion sequence NGRIS-35a
           [Sinorhizobium fredii NGR234]
 sp|P55626.1|Y4QE_RHISN RecName: Full=Putative transposase y4qE
 gb|AAB91829.1| putative transposase of degenerate insertion sequence NGRIS-35a
           [Sinorhizobium fredii NGR234]
          Length = 390

 Score =  294 bits (752), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 136/171 (79%), Positives = 155/171 (90%)

Query: 1   VAKLRNAIAIADAGREGEVRFFGEVDASATNMRRVLGRIANRFDRVHFCYEAGPTGYGLY 60
           VAKL+NAIA+A++GR GEVR++GEV+AS   +RR + +I  +F+ V+FCYEAGPTGYGLY
Sbjct: 45  VAKLKNAIAVAESGRNGEVRYWGEVEASDAGIRRAIKQITAKFEHVYFCYEAGPTGYGLY 104

Query: 61  RLIRSLGHQCTVVAPSLIPRKPGDRVKTNRRDAVSLARLLRAGELTAVWVPDEGHEAMRD 120
           RLIRSLGH+C VVAPSLIPRKPGDRVKTNRRDA+SLARLLRAGELTAVWVPDE HEAMRD
Sbjct: 105 RLIRSLGHECIVVAPSLIPRKPGDRVKTNRRDAISLARLLRAGELTAVWVPDEDHEAMRD 164

Query: 121 LVRARSAAVETLRIHRQQVSAFMLKHGRTYPRKKGWTMRYLRWLQEQQFDH 171
           LVRAR++AVETLR HRQQV+AFMLKHGR YP K+ WTMRYLRWLQEQ FDH
Sbjct: 165 LVRARTSAVETLRTHRQQVNAFMLKHGRIYPGKRSWTMRYLRWLQEQHFDH 215