BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0231.0002.p (241 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767681.1| amidase [Bradyrhizobium japonicum USDA 110] >gi... 340 8e-92 ref|ZP_08628987.1| amidase [Bradyrhizobiaceae bacterium SG-6C] >... 324 5e-87 ref|YP_001208628.1| amidase [Bradyrhizobium sp. ORS 278] >gi|146... 323 9e-87 ref|YP_001990658.1| amidase [Rhodopseudomonas palustris TIE-1] >... 317 1e-84 ref|YP_487658.1| amidase [Rhodopseudomonas palustris HaA2] >gi|8... 317 1e-84 >ref|NP_767681.1| amidase [Bradyrhizobium japonicum USDA 110] dbj|BAC46306.1| glutamyl-tRNA(Gln) amidotransferase [Bradyrhizobium japonicum USDA 110] Length = 458 Score = 340 bits (873), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 171/201 (85%), Positives = 190/201 (94%) Query: 41 AIAGGYFQQNLFPEAAEAVARVAKALGATRTVELPEAARARAAAYIITTTEGAALHLDHL 100 AIAGGYFQ+N+FPEA EAV+RVAKALGAT+ VE+PEAARARAAAY+I+TTEGA+LHLD L Sbjct: 258 AIAGGYFQKNVFPEAVEAVSRVAKALGATQIVEVPEAARARAAAYVISTTEGASLHLDRL 317 Query: 101 RKRPNDFDPAVRDRLIAGAMIPAVYVDKAQKFRRWYRARVLELFQSVDVILAPATPCTAP 160 RKRPNDFDPAVRDRLIAGAM+PA VD+AQKFRRWYRA+ E+F+SVDV+LAPATPCTAP Sbjct: 318 RKRPNDFDPAVRDRLIAGAMVPAPLVDRAQKFRRWYRAQFSEIFKSVDVLLAPATPCTAP 377 Query: 161 KIGQANFTLDGVELPVRANIGIHTQPISFIGLPVVAVPVPLEPMPIGVQIIAAPWREDVA 220 K+GQ NF LDGVELPVRANIGIHTQPISFIGLPVVAVPVPLEP+PIGVQIIAAPWRED+A Sbjct: 378 KLGQVNFNLDGVELPVRANIGIHTQPISFIGLPVVAVPVPLEPLPIGVQIIAAPWREDIA 437 Query: 221 LRVAYALEQMGVVAAPAPRGI 241 LRVA+ LE+MGVVAAPAPRG Sbjct: 438 LRVAHTLERMGVVAAPAPRGF 458 >ref|ZP_08628987.1| amidase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08346.1| amidase [Bradyrhizobiaceae bacterium SG-6C] Length = 471 Score = 324 bits (831), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 164/201 (81%), Positives = 182/201 (90%) Query: 41 AIAGGYFQQNLFPEAAEAVARVAKALGATRTVELPEAARARAAAYIITTTEGAALHLDHL 100 A+AGGYF++NL PEA EAVARVAKAL T VE+PEAARARAAA++ITT+E A+LHLD L Sbjct: 271 AVAGGYFKENLTPEAMEAVARVAKALSVTAEVEIPEAARARAAAFVITTSEAASLHLDRL 330 Query: 101 RKRPNDFDPAVRDRLIAGAMIPAVYVDKAQKFRRWYRARVLELFQSVDVILAPATPCTAP 160 R RP DFDPAVRDRLIAGAM+P+V+VD+AQKFRRWYR +VLELF+SVDVILAPATPC AP Sbjct: 331 RTRPQDFDPAVRDRLIAGAMVPSVFVDRAQKFRRWYREQVLELFKSVDVILAPATPCIAP 390 Query: 161 KIGQANFTLDGVELPVRANIGIHTQPISFIGLPVVAVPVPLEPMPIGVQIIAAPWREDVA 220 KIGQA F LDGVELPVR NIGIHTQPISFIGLPVVAVPVPL+PMP+GVQ+IAAPWREDVA Sbjct: 391 KIGQATFVLDGVELPVRPNIGIHTQPISFIGLPVVAVPVPLDPMPVGVQVIAAPWREDVA 450 Query: 221 LRVAYALEQMGVVAAPAPRGI 241 LRVAYALEQ GVV+AP P I Sbjct: 451 LRVAYALEQAGVVSAPRPMDI 471 >ref|YP_001208628.1| amidase [Bradyrhizobium sp. ORS 278] emb|CAL80413.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A [Bradyrhizobium sp. ORS 278] Length = 475 Score = 323 bits (829), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 164/201 (81%), Positives = 185/201 (92%) Query: 41 AIAGGYFQQNLFPEAAEAVARVAKALGATRTVELPEAARARAAAYIITTTEGAALHLDHL 100 AIAGG+FQ+NLFPEAAEAV+RV AL T+ +E+PEAARARAAAY+I+TTEGA+LHLD L Sbjct: 267 AIAGGHFQKNLFPEAAEAVSRVVAALKVTQVIEVPEAARARAAAYVISTTEGASLHLDRL 326 Query: 101 RKRPNDFDPAVRDRLIAGAMIPAVYVDKAQKFRRWYRARVLELFQSVDVILAPATPCTAP 160 R RP+DFDPAVRDRLIAGAMIPA VD+AQKFRRWYRA+VLELF+SVDV++APATPC AP Sbjct: 327 RTRPDDFDPAVRDRLIAGAMIPAPMVDRAQKFRRWYRAKVLELFRSVDVLIAPATPCVAP 386 Query: 161 KIGQANFTLDGVELPVRANIGIHTQPISFIGLPVVAVPVPLEPMPIGVQIIAAPWREDVA 220 K+GQA F LDGVELPVRANIGIHTQPISFIGLPVVAVP+PL PMPIGVQIIAAPW E VA Sbjct: 387 KLGQATFVLDGVELPVRANIGIHTQPISFIGLPVVAVPIPLAPMPIGVQIIAAPWCEHVA 446 Query: 221 LRVAYALEQMGVVAAPAPRGI 241 LRVA+AL+Q+GV AAPAPRG+ Sbjct: 447 LRVAHALQQLGVAAAPAPRGV 467 >ref|YP_001990658.1| amidase [Rhodopseudomonas palustris TIE-1] gb|ACF00183.1| amidohydrolase, AtzE family [Rhodopseudomonas palustris TIE-1] Length = 458 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 160/199 (80%), Positives = 179/199 (89%) Query: 41 AIAGGYFQQNLFPEAAEAVARVAKALGATRTVELPEAARARAAAYIITTTEGAALHLDHL 100 A AGGYF+ NLFPEA EAV RV KALG TR+VELPEAARARAAAY+I+TTEGA+LHLD L Sbjct: 258 AKAGGYFETNLFPEAREAVDRVVKALGITRSVELPEAARARAAAYVISTTEGASLHLDRL 317 Query: 101 RKRPNDFDPAVRDRLIAGAMIPAVYVDKAQKFRRWYRARVLELFQSVDVILAPATPCTAP 160 R++PNDFDPAVRDRL+AGAM+PA VD+AQKFRRWYRARVLELF+ VDVI+APATPC AP Sbjct: 318 RRQPNDFDPAVRDRLLAGAMVPASLVDRAQKFRRWYRARVLELFEQVDVIIAPATPCVAP 377 Query: 161 KIGQANFTLDGVELPVRANIGIHTQPISFIGLPVVAVPVPLEPMPIGVQIIAAPWREDVA 220 K+GQ FTLDGVELPVRAN+GIHTQPISFIGLPVVA P+PLEP+PIGVQIIAAPWRED+A Sbjct: 378 KLGQVTFTLDGVELPVRANVGIHTQPISFIGLPVVAAPIPLEPLPIGVQIIAAPWREDIA 437 Query: 221 LRVAYALEQMGVVAAPAPR 239 LRVA ALE+ V AP P+ Sbjct: 438 LRVAAALERADVARAPRPK 456 >ref|YP_487658.1| amidase [Rhodopseudomonas palustris HaA2] gb|ABD08747.1| Amidase [Rhodopseudomonas palustris HaA2] Length = 467 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 163/197 (82%), Positives = 177/197 (89%) Query: 43 AGGYFQQNLFPEAAEAVARVAKALGATRTVELPEAARARAAAYIITTTEGAALHLDHLRK 102 AGGYF NLFPEA EAV RVAKAL T TVELPEAARARAAA++ITT EGA+LHLD LR+ Sbjct: 269 AGGYFAANLFPEAREAVDRVAKALSITITVELPEAARARAAAFVITTVEGASLHLDRLRQ 328 Query: 103 RPNDFDPAVRDRLIAGAMIPAVYVDKAQKFRRWYRARVLELFQSVDVILAPATPCTAPKI 162 RPNDFDPAVRDRLIAGAMIPA VD+AQKFRRWYRARVLELF+ VDVI+APATPC APK+ Sbjct: 329 RPNDFDPAVRDRLIAGAMIPAPLVDRAQKFRRWYRARVLELFRDVDVIIAPATPCVAPKL 388 Query: 163 GQANFTLDGVELPVRANIGIHTQPISFIGLPVVAVPVPLEPMPIGVQIIAAPWREDVALR 222 GQ +F LDGVELPVRANIGIHTQPISFIGLPVVAVP+PLEPMPIG+QIIAAPWRED+ALR Sbjct: 389 GQQSFMLDGVELPVRANIGIHTQPISFIGLPVVAVPIPLEPMPIGIQIIAAPWREDLALR 448 Query: 223 VAYALEQMGVVAAPAPR 239 VA+ALE GV AP P+ Sbjct: 449 VAHALETAGVACAPRPQ 465