BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0231.0001.p         (130 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001208627.1| hypothetical protein BRADO6817 [Bradyrhizobi...   237   4e-61
ref|YP_001236894.1| hypothetical protein BBta_0722 [Bradyrhizobi...   234   3e-60
ref|YP_004110343.1| hypothetical protein Rpdx1_4054 [Rhodopseudo...   218   2e-55
ref|NP_767682.1| hypothetical protein blr1042 [Bradyrhizobium ja...   213   6e-54
ref|NP_946816.1| hypothetical protein RPA1468 [Rhodopseudomonas ...   209   2e-52

>ref|YP_001208627.1| hypothetical protein BRADO6817 [Bradyrhizobium sp. ORS 278]
 emb|CAL80412.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 130

 Score =  237 bits (604), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 111/130 (85%), Positives = 122/130 (93%)

Query: 1   MDIDLPDVVAEVTAQFQRYEKALVSNDVAVLDELFRDDRRTLRYGIGENLYGYAEIMAFR 60
           M++DLPDVVAEVTAQFQRYE+ALVSNDVAVLDELFR+D RTLRYGIGENLYGY EI AFR
Sbjct: 1   MEVDLPDVVAEVTAQFQRYEQALVSNDVAVLDELFRNDARTLRYGIGENLYGYGEISAFR 60

Query: 61  AGRSPVGLMRKIERTVITTYGRDTAIASTLFYRDSAPGRVGRQMQTWIRFPEGWRIVAAH 120
           + RSP+GLMR+  RTVI+TYGRDTA+ASTLFYRDSAPG+VGRQMQTWIRFPEGWRIVAAH
Sbjct: 61  SARSPIGLMRRTARTVISTYGRDTAVASTLFYRDSAPGKVGRQMQTWIRFPEGWRIVAAH 120

Query: 121 VSVIDEPKGA 130
           VS+IDE KG 
Sbjct: 121 VSIIDEAKGG 130


>ref|YP_001236894.1| hypothetical protein BBta_0722 [Bradyrhizobium sp. BTAi1]
 gb|ABQ32988.1| hypothetical protein BBta_0722 [Bradyrhizobium sp. BTAi1]
          Length = 130

 Score =  234 bits (598), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 110/129 (85%), Positives = 119/129 (92%)

Query: 1   MDIDLPDVVAEVTAQFQRYEKALVSNDVAVLDELFRDDRRTLRYGIGENLYGYAEIMAFR 60
           M++DLPDVVAEVTAQFQRYE+ALVSNDVAVLDELFR D RTLRYGIGENLYGY EI AFR
Sbjct: 1   MEVDLPDVVAEVTAQFQRYEQALVSNDVAVLDELFRKDARTLRYGIGENLYGYGEIAAFR 60

Query: 61  AGRSPVGLMRKIERTVITTYGRDTAIASTLFYRDSAPGRVGRQMQTWIRFPEGWRIVAAH 120
           A RSP GLMR+  RT+IT YGRDTA+ASTLFYRDSAPG+VGRQMQTW+RFPEGWRIVAAH
Sbjct: 61  AARSPAGLMRRTARTIITAYGRDTAVASTLFYRDSAPGKVGRQMQTWVRFPEGWRIVAAH 120

Query: 121 VSVIDEPKG 129
           VS+IDE KG
Sbjct: 121 VSIIDEAKG 129


>ref|YP_004110343.1| hypothetical protein Rpdx1_4054 [Rhodopseudomonas palustris DX-1]
 gb|ADU45610.1| hypothetical protein Rpdx1_4054 [Rhodopseudomonas palustris DX-1]
          Length = 131

 Score =  218 bits (555), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 103/128 (80%), Positives = 112/128 (87%)

Query: 1   MDIDLPDVVAEVTAQFQRYEKALVSNDVAVLDELFRDDRRTLRYGIGENLYGYAEIMAFR 60
           MDIDLPD+VAEV+  F RYE ALV NDVA LDELF +D RTLRYG GENLY YAEI AFR
Sbjct: 1   MDIDLPDIVAEVSEAFARYEAALVGNDVATLDELFHNDPRTLRYGGGENLYCYAEIQAFR 60

Query: 61  AGRSPVGLMRKIERTVITTYGRDTAIASTLFYRDSAPGRVGRQMQTWIRFPEGWRIVAAH 120
           A RSPVGLMR   RTVIT+YGRDTA+ASTLFYRD+APG+VGRQMQTW+RFPEGWRIVAAH
Sbjct: 61  AARSPVGLMRSTARTVITSYGRDTAVASTLFYRDNAPGKVGRQMQTWVRFPEGWRIVAAH 120

Query: 121 VSVIDEPK 128
           VS IDEP+
Sbjct: 121 VSTIDEPR 128


>ref|NP_767682.1| hypothetical protein blr1042 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46307.1| blr1042 [Bradyrhizobium japonicum USDA 110]
          Length = 130

 Score =  213 bits (543), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 99/128 (77%), Positives = 114/128 (89%)

Query: 1   MDIDLPDVVAEVTAQFQRYEKALVSNDVAVLDELFRDDRRTLRYGIGENLYGYAEIMAFR 60
           M+IDLP+V+AEV A F RYE+ALV+NDV VL ELFR+D RTLRYGIGENLYGY  I  FR
Sbjct: 1   MEIDLPEVIAEVKAAFDRYEQALVTNDVTVLGELFRNDPRTLRYGIGENLYGYEAISGFR 60

Query: 61  AGRSPVGLMRKIERTVITTYGRDTAIASTLFYRDSAPGRVGRQMQTWIRFPEGWRIVAAH 120
           AGRSPVGL R+  +TVI++YGRDTA+ASTLFYRD+APG+VGRQMQTWIRFPEGWR+VAAH
Sbjct: 61  AGRSPVGLNRRTAKTVISSYGRDTAVASTLFYRDTAPGKVGRQMQTWIRFPEGWRVVAAH 120

Query: 121 VSVIDEPK 128
           VS+IDE K
Sbjct: 121 VSIIDESK 128


>ref|NP_946816.1| hypothetical protein RPA1468 [Rhodopseudomonas palustris CGA009]
 emb|CAE26910.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 131

 Score =  209 bits (531), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 97/130 (74%), Positives = 111/130 (85%)

Query: 1   MDIDLPDVVAEVTAQFQRYEKALVSNDVAVLDELFRDDRRTLRYGIGENLYGYAEIMAFR 60
           MDIDLP++VAEV+  F RYE ALV NDVA L+ELF +D RTLRYG GENLYGY EI AFR
Sbjct: 1   MDIDLPEIVAEVSEAFARYEAALVGNDVATLNELFHNDPRTLRYGGGENLYGYDEIKAFR 60

Query: 61  AGRSPVGLMRKIERTVITTYGRDTAIASTLFYRDSAPGRVGRQMQTWIRFPEGWRIVAAH 120
             RSP+GLMR   RT+IT YGRDTA+ASTLFYRD+APG+VGRQMQTW+RF EGWRIVAAH
Sbjct: 61  GARSPIGLMRTTARTIITAYGRDTAVASTLFYRDNAPGKVGRQMQTWVRFAEGWRIVAAH 120

Query: 121 VSVIDEPKGA 130
           VS+IDEP+ +
Sbjct: 121 VSMIDEPRAS 130