BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0230.0009.p (460 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02188547.1| hypothetical protein BAL199_05164 [alpha prot... 482 e-134 dbj|BAG31011.1| hypothetical protein [Bosea sp. AJ110407] 477 e-132 ref|NP_772153.1| hypothetical protein blr5513 [Bradyrhizobium ja... 468 e-130 ref|YP_002360470.1| beta-lactamase [Methylocella silvestris BL2]... 465 e-129 ref|YP_001241072.1| putative beta lactamase family protein [Brad... 439 e-121 >ref|ZP_02188547.1| hypothetical protein BAL199_05164 [alpha proteobacterium BAL199] gb|EDP64823.1| hypothetical protein BAL199_05164 [alpha proteobacterium BAL199] Length = 455 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 233/453 (51%), Positives = 310/453 (68%) Query: 1 MSDWLSSALDYIPTWIDYQRELFDQPGVSLAIAHKGQVLLEHASGMADLATREPLTPRHR 60 M WL +ALDYIP W+++Q + +QPG ++A+AH+G+V+LE A G A+L++ E LTPRHR Sbjct: 1 MDGWLKAALDYIPDWLEHQVRVTEQPGCAIAVAHRGEVVLERAFGHANLSSGEALTPRHR 60 Query: 61 FRVASHSKTFTAAGIMLLRERNKIRLDDRLGEYLVDLTLDVSDVTISQLLSHAAGLTRDG 120 RVASHSK+FT+AGI+ LRE +++RLDD +G Y+ L DV+ TI+Q+LSH+AGL RDG Sbjct: 61 LRVASHSKSFTSAGILKLREADRLRLDDPVGRYVDGLHPDVAAATITQVLSHSAGLIRDG 120 Query: 121 PDSGQFSDRRPFLSEAEFRTDLSAPQPLAPGVTFKYSNHGFALLGKVIEKVTGEPYGRWI 180 D+GQ+ DRRP+L+E++ R+ L+ L FKYSNHGF LLG VI+ VTGEPY WI Sbjct: 121 LDAGQWQDRRPYLNESQLRSALAEAPVLPASTRFKYSNHGFGLLGLVIQAVTGEPYRTWI 180 Query: 181 YDQVVVPVGLTETTPDFDPSVCCPLARGHSTRQPYGRRFVIPGDNVTNDMASATGFTATA 240 + ++V GL ET PD P ARGHS + P GRR V+PGDN T ++SATGF +TA Sbjct: 181 HREIVTASGLEETVPDVPVPNDVPFARGHSGKLPLGRRVVVPGDNDTMALSSATGFVSTA 240 Query: 241 GDLARFLGQLSPGAQSSILTVASRREMTRRHWRDAHSQLERYYGLGTISGPPGPWSWVGH 300 GDLARF L P A+ S+L+ SRREM R+HW + HS L R+YGLG G G W W GH Sbjct: 241 GDLARFFASLDPEAERSVLSPESRREMVRKHWHEPHSSLGRHYGLGLTLGQVGDWEWFGH 300 Query: 301 AGGFQGTLTRTVALPEQDIAISVLTNAIDGLANVWFESVIHILKAIHDLGAPGPETARWR 360 GGFQ ++RT ALP +++ +S+LTNA+DGLA+ W + I +L+ GAP W Sbjct: 301 GGGFQSCISRTAALPGRELVVSILTNAVDGLAHPWSDGAIRLLREFEKRGAPSDSALDWT 360 Query: 361 GRWWTLWGPFDLVPGNDKVLVATPGQLSPFLDATELKPSGIDEAIVTSAQAFGDLGEACR 420 GRWWTLW DLVP D V+VATPG SPFLDA+E+ +G D+ + A F + GE R Sbjct: 361 GRWWTLWAAIDLVPAGDHVVVATPGTASPFLDASEIAVTGPDQGTIRLAGGFANHGEGAR 420 Query: 421 LMRNSAGIVEEVGIGGKRLVTEDAIRSEVQHRY 453 L+R G V E+ +GG + + E A+ E++ RY Sbjct: 421 LVRGGDGKVSELWLGGTKFLPEAALSDELRQRY 453 >dbj|BAG31011.1| hypothetical protein [Bosea sp. AJ110407] Length = 501 Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust. Identities = 242/453 (53%), Positives = 302/453 (66%) Query: 1 MSDWLSSALDYIPTWIDYQRELFDQPGVSLAIAHKGQVLLEHASGMADLATREPLTPRHR 60 M+ WL SAL Y+ +W+D+QR L DQPGV++A+A+ G++ LE A G ADL T E LTPRH Sbjct: 42 MTPWLPSALAYVASWLDFQRRLHDQPGVAIAVANGGEIALEAAFGSADLVTGEALTPRHG 101 Query: 61 FRVASHSKTFTAAGIMLLRERNKIRLDDRLGEYLVDLTLDVSDVTISQLLSHAAGLTRDG 120 FR+ASHSK+FT AGI+ L E ++RLDDR+G + L D++ VTI Q+LS++AGLTRDG Sbjct: 102 FRIASHSKSFTGAGILRLVEDGRLRLDDRVGSLIDGLHPDIAAVTIRQVLSNSAGLTRDG 161 Query: 121 PDSGQFSDRRPFLSEAEFRTDLSAPQPLAPGVTFKYSNHGFALLGKVIEKVTGEPYGRWI 180 PD+GQF DR+P+ AE DL+ P FKYSNHGF LLG VIE VTG Y WI Sbjct: 162 PDNGQFFDRKPYCDRAELLDDLAEPPVFPASQRFKYSNHGFGLLGLVIESVTGLSYSEWI 221 Query: 181 YDQVVVPVGLTETTPDFDPSVCCPLARGHSTRQPYGRRFVIPGDNVTNDMASATGFTATA 240 D+VV VGLTET D + P+A+GHS QP G R VIPGDN M SA GF ATA Sbjct: 222 TDEVVAKVGLTETKADIELWGHRPMAKGHSGTQPLGYRVVIPGDNPGRAMVSAAGFVATA 281 Query: 241 GDLARFLGQLSPGAQSSILTVASRREMTRRHWRDAHSQLERYYGLGTISGPPGPWSWVGH 300 D+AR+ QLSP A++SILT SRREMTRR W D + L R+YGLGTISG G W W GH Sbjct: 282 ADVARYFAQLSPQAETSILTPLSRREMTRRLWPDDEASLGRHYGLGTISGGEGAWRWFGH 341 Query: 301 AGGFQGTLTRTVALPEQDIAISVLTNAIDGLANVWFESVIHILKAIHDLGAPGPETARWR 360 +GGFQG +TRT P QD+ +SVLTNAIDGLA+ W + V+HILK + GAP T W Sbjct: 342 SGGFQGFITRTCVFPAQDVTVSVLTNAIDGLAHPWLDGVVHILKTFSERGAPPAGTEDWN 401 Query: 361 GRWWTLWGPFDLVPGNDKVLVATPGQLSPFLDATELKPSGIDEAIVTSAQAFGDLGEACR 420 R W +WG DLVP +D+VL+A P +PFLDA E+ D + A F GE R Sbjct: 402 RRGWCIWGAGDLVPVSDRVLIANPALFTPFLDAGEITLDAPDHGRIIRASGFNSPGEPAR 461 Query: 421 LMRNSAGIVEEVGIGGKRLVTEDAIRSEVQHRY 453 L+R+ G + V +GG R V E+ ++ E+ RY Sbjct: 462 LVRDETGAAQSVWLGGGRFVGEEDMKIEMLARY 494 >ref|NP_772153.1| hypothetical protein blr5513 [Bradyrhizobium japonicum USDA 110] dbj|BAC50778.1| blr5513 [Bradyrhizobium japonicum USDA 110] Length = 482 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 231/458 (50%), Positives = 302/458 (65%), Gaps = 1/458 (0%) Query: 1 MSDWLSSALDYIPTWIDYQRELFDQPGVSLAIAHKGQVLLEHASGMADLATREPLTPRHR 60 M WL SA+DYI +WI++Q+ QPGV +A AH+G+V+ EHA G+A+L T E LTPRHR Sbjct: 22 MDTWLRSAIDYISSWIEFQQTTIQQPGVIVAFAHRGEVVAEHAFGVANLDTGEKLTPRHR 81 Query: 61 FRVASHSKTFTAAGIMLLRERNKIRLDDRLGEYLVDLTLDVSDVTISQLLSHAAGLTRDG 120 R+ASHSK+FT+AGIM LRE+ K+RLDD +G+Y+ L V++ TI+QLLSH+AGLTRDG Sbjct: 82 CRIASHSKSFTSAGIMKLREQRKLRLDDSVGQYVGGLHPRVAETTIAQLLSHSAGLTRDG 141 Query: 121 PDSGQFSDRRPFLSEAEFRTDLSAPQPLAPGVTFKYSNHGFALLGKVIEKVTGEPYGRWI 180 DSGQF DRRP+L+ E +L P + PG FKYSNHGF LLG VIE VT EPY WI Sbjct: 142 ADSGQFIDRRPYLNAEELLAELKLPTAIEPGTRFKYSNHGFGLLGLVIEAVTKEPYTAWI 201 Query: 181 YDQVVVPVGLTETTPDFDPSVCCPLARGHSTRQPYGRRFVIPGDNVTNDMASATGFTATA 240 +++ P GL ET PD ARGH+ + P G R VIPGDN T+ MASATGF ATA Sbjct: 202 KREIIEPAGLRETEPDAPLPKGAAFARGHTRKVPLGERCVIPGDNPTHAMASATGFAATA 261 Query: 241 GDLARFLGQLSPGAQSSILTVASRREMTRRHWRDAHSQLERYYGLGTISGPPGPWSWVGH 300 D ARF QL+P A+ S+L+VASRREMTR HWR S E YYGLG +G W W+GH Sbjct: 262 ADTARFFAQLAPNARKSVLSVASRREMTRHHWRIPQS-FEAYYGLGIGAGKLDGWDWLGH 320 Query: 301 AGGFQGTLTRTVALPEQDIAISVLTNAIDGLANVWFESVIHILKAIHDLGAPGPETARWR 360 G FQG ++RT A+P ++AIS+++N+IDG A W + + IL+ GAP W Sbjct: 321 GGHFQGYISRTCAIPACELAISIISNSIDGAAPFWMDGAMQILRTFKTRGAPDRRVRDWT 380 Query: 361 GRWWTLWGPFDLVPGNDKVLVATPGQLSPFLDATELKPSGIDEAIVTSAQAFGDLGEACR 420 GRWWT+WG DLVP D+VL+A P +PF+DA E++ +G D + +A GE R Sbjct: 381 GRWWTIWGATDLVPMGDRVLIANPQFNNPFMDAGEIEVTGRDTGRIAAAAGHSSHGEPVR 440 Query: 421 LMRNSAGIVEEVGIGGKRLVTEDAIRSEVQHRYQPSSR 458 +R++ G V ++ + G + + E+ +Y P R Sbjct: 441 RVRDARGKVSDIWLAGANVKPASVVAREIARQYPPRKR 478 >ref|YP_002360470.1| beta-lactamase [Methylocella silvestris BL2] gb|ACK49108.1| beta-lactamase [Methylocella silvestris BL2] Length = 456 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 235/453 (51%), Positives = 295/453 (65%) Query: 1 MSDWLSSALDYIPTWIDYQRELFDQPGVSLAIAHKGQVLLEHASGMADLATREPLTPRHR 60 M WL++AL YIP WI +Q D PGV++AI G++ L+ A G+A+ A LTP H Sbjct: 1 MKKWLAAALGYIPRWIAFQLRQQDLPGVAVAITADGKLALDCAFGIANRAAGAALTPGHN 60 Query: 61 FRVASHSKTFTAAGIMLLRERNKIRLDDRLGEYLVDLTLDVSDVTISQLLSHAAGLTRDG 120 FRVASHSKTFTA G++ L + ++RLDD +G Y+ L ++ +++QLLSH+AG+ RDG Sbjct: 61 FRVASHSKTFTAVGLLKLADAGRLRLDDAVGHYVEGLNPQIAKASLAQLLSHSAGVVRDG 120 Query: 121 PDSGQFSDRRPFLSEAEFRTDLSAPQPLAPGVTFKYSNHGFALLGKVIEKVTGEPYGRWI 180 D GQ+ DRRPFL+EAE R L+ P L P + FKYSNH F LLG VI VTGE Y W+ Sbjct: 121 RDGGQWVDRRPFLNEAELREALAEPPILEPNLRFKYSNHAFGLLGLVIAAVTGESYNDWV 180 Query: 181 YDQVVVPVGLTETTPDFDPSVCCPLARGHSTRQPYGRRFVIPGDNVTNDMASATGFTATA 240 +VV GLT T PD + L++GHS + +G R VIPGDN T +A+ATGF ++A Sbjct: 181 AREVVAAAGLTGTYPDANEGARATLSQGHSAKLLFGERLVIPGDNPTYALAAATGFISSA 240 Query: 241 GDLARFLGQLSPGAQSSILTVASRREMTRRHWRDAHSQLERYYGLGTISGPPGPWSWVGH 300 +LA+F QL+P A SIL+VASRREMTRRHWR + ER+YGLG I G G W W GH Sbjct: 241 KNLAQFYSQLNPDADQSILSVASRREMTRRHWRVPDTSAERHYGLGLIHGDIGDWPWYGH 300 Query: 301 AGGFQGTLTRTVALPEQDIAISVLTNAIDGLANVWFESVIHILKAIHDLGAPGPETARWR 360 +G FQG T T LP Q++ +SVLTNA DG A F+ V HIL+A GAP + A W Sbjct: 301 SGSFQGFATHTAVLPSQELCVSVLTNASDGGAAQLFDGVTHILQAFAHHGAPHEDVAHWT 360 Query: 361 GRWWTLWGPFDLVPGNDKVLVATPGQLSPFLDATELKPSGIDEAIVTSAQAFGDLGEACR 420 GRWWTLWG DL P KVLVA P QL+PF D +EL P G D A +T A FG+ GE R Sbjct: 361 GRWWTLWGATDLTPMGHKVLVALPAQLNPFADVSELTPCGADAATITKAGGFGNFGEPAR 420 Query: 421 LMRNSAGIVEEVGIGGKRLVTEDAIRSEVQHRY 453 L+RN G V EV + G RL +E A E + RY Sbjct: 421 LVRNDKGDVSEVWLAGDRLQSEQAFSDEARRRY 453 >ref|YP_001241072.1| putative beta lactamase family protein [Bradyrhizobium sp. BTAi1] gb|ABQ37166.1| putative beta lactamase family protein [Bradyrhizobium sp. BTAi1] Length = 462 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 228/459 (49%), Positives = 299/459 (65%), Gaps = 2/459 (0%) Query: 1 MSDWLSSALDYIPTWIDYQRELFDQPGVSLAIAHKGQVLLEHASGMADLATREPLTPRHR 60 M WL +AL YI W+ +Q E+ QPG LAIAH+G+++LE A G A+L + E LTPRHR Sbjct: 1 MEPWLGAALGYIKDWLAFQVEVSGQPGCILAIAHRGEIVLEAAYGHANLDSGEKLTPRHR 60 Query: 61 FRVASHSKTFTAAGIMLLRERNKIRLDDRLGEYLVDLTLDVSDVTISQLLSHAAGLTRDG 120 FR+ASH+K FTAAGIM LRE+ +++LDD +G+Y+ DL DV+ T+SQLLSH AGL RDG Sbjct: 61 FRIASHTKAFTAAGIMRLREQKRLKLDDPVGDYVKDLHPDVATATLSQLLSHTAGLLRDG 120 Query: 121 PDSGQFSDRRPFLSEAEFRTDLSAPQPLAPGVTFKYSNHGFALLGKVIEKVTGEPYGRWI 180 DSGQF++ RP+L + E +L + P FKYSNHG+ LLG VIE++TGEPY W+ Sbjct: 121 NDSGQFTNGRPYLDKDELLAELRLAPAIEPNSRFKYSNHGYGLLGLVIEQITGEPYPSWL 180 Query: 181 YDQVVVPVGLTETTPDFDP-SVCCPLARGHSTRQPYGRRFVIPGDNVTNDMASATGFTAT 239 +++ P+GL E+ PD P ARGHS P GRR VIPGDN T + +A G AT Sbjct: 181 QREIMTPLGLRESAPDMTLLGKGVPFARGHSRTVPVGRRVVIPGDNPTQAIMAAAGVVAT 240 Query: 240 AGDLARFLGQLSPGAQSSILTVASRREMTRRHWRDAHSQLERYYGLGTISGPPGPWSWVG 299 A D ARF QL+P ++ S+L+VASRREM RR WR E YYGL +SG + W G Sbjct: 241 AADTARFFAQLAPNSKKSLLSVASRREMIRRQWRVPQDIEEAYYGLALMSGTTAGFDWFG 300 Query: 300 HAGGFQGTLTRTVALPEQDIAISVLTNAIDGLANVWFESVIHILKAIHDLGAPGPETARW 359 H GGFQG ++RT +P ++IAI+VLTNAIDG A W V IL+A GAP T W Sbjct: 301 HGGGFQGYISRTSVIPAREIAITVLTNAIDGWAPGWANGVKFILQAFATHGAPSRTTRDW 360 Query: 360 RGRWWTLWGPFDLVPGNDKVLVATPGQLSPFLDATELKPSGIDEAIVTSAQAFGDLGEAC 419 GRWWTLWG DLVP N +V+VA P ++PFLDA ++ +G D + A + GEA Sbjct: 361 TGRWWTLWGAVDLVPFNTQVMVANPVFINPFLDAARIEVTGRDAGRIVQAAGYASHGEAV 420 Query: 420 RLMRNSAGIVEEVGIGGKRLVTEDAIRSEVQHRYQPSSR 458 R +R +GI E+ + G R+ E +R+E++ +Y R Sbjct: 421 RRVRTKSGI-SEIWLAGARVRPERVLRAEMERKYPKGRR 458