BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0228.0015.p (307 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07674372.1| transcriptional regulator [Ralstonia sp. 5_7_... 354 8e-96 ref|YP_002546850.1| transcriptional regulator [Agrobacterium rad... 345 7e-93 ref|ZP_04930615.1| hypothetical protein PACG_03360 [Pseudomonas ... 342 5e-92 ref|NP_249170.1| transcriptional regulator [Pseudomonas aerugino... 340 2e-91 gb|EGM14765.1| transcriptional regulator [Pseudomonas aeruginosa... 339 3e-91 >ref|ZP_07674372.1| transcriptional regulator [Ralstonia sp. 5_7_47FAA] gb|EFP67192.1| transcriptional regulator [Ralstonia sp. 5_7_47FAA] Length = 316 Score = 354 bits (909), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 174/287 (60%), Positives = 214/287 (74%) Query: 1 MDRIKLHDLRCFDAVATKGSFQAAGIALNRSHPSVFAAVARLEQQLGLTLFDRSGYRIGL 60 M LH+L+CFDAV T GSFQAA L+RSHPSVFAAVA+LE QLGL+L DR GYR+ L Sbjct: 1 MQNFTLHELQCFDAVVTAGSFQAAAERLHRSHPSVFAAVAKLEGQLGLSLLDRGGYRVRL 60 Query: 61 TDAGRTFHARAQVTLREFELLQGYAEQLAGGEEVVLRIVIGDLCPRPPVLQMLSEFFARY 120 T+AGR+FH + Q LRE + L+ +A+QLA GEE LR+V+GDLCP PVL +LS+FF + Sbjct: 61 TEAGRSFHRKVQSVLRESDELRTHAKQLAMGEEAELRVVLGDLCPLKPVLALLSQFFGQC 120 Query: 121 PNTRLHLEYEAVGGPLERLIDDNADLVFHRAEPSDPRFEQIKLSTTAMVPVVAPGFLPFA 180 TRLHL++EAV GP ERL++D+ DL+ HR D R E I L AMVPVVAPGFLPFA Sbjct: 121 AQTRLHLQFEAVTGPWERLLEDDTDLIVHRVPKGDVRMEWIDLGKIAMVPVVAPGFLPFA 180 Query: 181 WTKKVTPEHMRPFTQCVIRDTARRPSPENFFLIDGAHQCSVPDQMMKKELILHRLAWGHL 240 T +TP M+ F QCVI D+AR P ++ ++IDGA QC+VPDQ+MKKELILH +AWGHL Sbjct: 181 ITSAITPAQMQRFMQCVINDSARNPPEQSHYVIDGAPQCAVPDQLMKKELILHGMAWGHL 240 Query: 241 PAWLIEDELRDGRLISIAGPNFPGREENLAAVRRRQHLHGPVAEALW 287 P +LI+ ELR+G L+SIAG +FPG + LA RRR HGPVA LW Sbjct: 241 PRFLIDAELREGTLLSIAGRHFPGMVQELAVARRRDRPHGPVANRLW 287 >ref|YP_002546850.1| transcriptional regulator [Agrobacterium radiobacter K84] gb|ACM31386.1| transcriptional regulator [Agrobacterium radiobacter K84] Length = 305 Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 170/291 (58%), Positives = 206/291 (70%) Query: 1 MDRIKLHDLRCFDAVATKGSFQAAGIALNRSHPSVFAAVARLEQQLGLTLFDRSGYRIGL 60 M LHDL+CFDAV G FQ A L+RSHP+VFAAVA+LE+QLGL L DRSGYR+ Sbjct: 1 MAEFTLHDLQCFDAVVRSGGFQPAAAMLHRSHPAVFAAVAKLERQLGLVLLDRSGYRVRA 60 Query: 61 TDAGRTFHARAQVTLREFELLQGYAEQLAGGEEVVLRIVIGDLCPRPPVLQMLSEFFARY 120 TDAG +FH RAQ LRE E L+ +A QL+ GEE + +VIGDLCPRP VL +L FFA+ Sbjct: 61 TDAGLSFHRRAQSLLRELEGLRAHAAQLSMGEETDIHVVIGDLCPRPEVLGLLGRFFAQC 120 Query: 121 PNTRLHLEYEAVGGPLERLIDDNADLVFHRAEPSDPRFEQIKLSTTAMVPVVAPGFLPFA 180 P TRLHL +EAVGGP ERLID ADL+ H E SD R E + L +PVVAPGFLP Sbjct: 121 PGTRLHLHFEAVGGPWERLIDGEADLILHWVEKSDSRAEWVDLCNVPFIPVVAPGFLPKR 180 Query: 181 WTKKVTPEHMRPFTQCVIRDTARRPSPENFFLIDGAHQCSVPDQMMKKELILHRLAWGHL 240 + +TP+ M FTQCVIRDTAR +++F+I+GA QC VPDQ MKKE+IL L WGH+ Sbjct: 181 IKQPITPDQMHTFTQCVIRDTARHSPQQDYFMIEGAPQCMVPDQGMKKEIILQGLGWGHM 240 Query: 241 PAWLIEDELRDGRLISIAGPNFPGREENLAAVRRRQHLHGPVAEALWLHLK 291 P +LIE+ELRDGRL SIAG + PGR E L RRR GP++ LW +++ Sbjct: 241 PGFLIEEELRDGRLQSIAGRHLPGRTEELVVARRRDQPQGPISNRLWAYIQ 291 >ref|ZP_04930615.1| hypothetical protein PACG_03360 [Pseudomonas aeruginosa C3719] gb|EAZ54734.1| hypothetical protein PACG_03360 [Pseudomonas aeruginosa C3719] Length = 316 Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 167/291 (57%), Positives = 206/291 (70%) Query: 1 MDRIKLHDLRCFDAVATKGSFQAAGIALNRSHPSVFAAVARLEQQLGLTLFDRSGYRIGL 60 M LHDL+CFDAV G FQAA L+RSHP+VFAAVARLE+QLGL L +R GYR+GL Sbjct: 1 MHDFTLHDLQCFDAVVDAGGFQAAAQRLHRSHPAVFAAVARLERQLGLVLLERGGYRVGL 60 Query: 61 TDAGRTFHARAQVTLREFELLQGYAEQLAGGEEVVLRIVIGDLCPRPPVLQMLSEFFARY 120 T AGR+FH RAQ L E E L+G+A LA GEE LR+V+GDLCP P L +L+ FF Sbjct: 61 TAAGRSFHQRAQALLYELEGLRGHAAHLAQGEESELRVVLGDLCPPRPALALLAGFFGSQ 120 Query: 121 PNTRLHLEYEAVGGPLERLIDDNADLVFHRAEPSDPRFEQIKLSTTAMVPVVAPGFLPFA 180 P TRL L +E V GPLERL+D ADL+ HR + SDPR E + L +VPV+APG L Sbjct: 121 PQTRLQLLFETVSGPLERLLDGEADLILHRVDKSDPRLEWLDLCRVGLVPVIAPGLLGDP 180 Query: 181 WTKKVTPEHMRPFTQCVIRDTARRPSPENFFLIDGAHQCSVPDQMMKKELILHRLAWGHL 240 + V PE +RPF QCV+RD+AR SP ++F++ GA QCSVPDQ KKE+IL L WGHL Sbjct: 181 PPRPVRPEQLRPFAQCVMRDSARHSSPTDYFMLAGARQCSVPDQRTKKEVILQGLGWGHL 240 Query: 241 PAWLIEDELRDGRLISIAGPNFPGREENLAAVRRRQHLHGPVAEALWLHLK 291 P +L+++EL DGRL+++AGP+ PGR E + A RRR GPVAE LW L+ Sbjct: 241 PDFLVDEELADGRLLALAGPHLPGRSEEVVAARRRDRAQGPVAERLWAFLR 291 >ref|NP_249170.1| transcriptional regulator [Pseudomonas aeruginosa PAO1] gb|AAG03868.1|AE004485_9 probable transcriptional regulator [Pseudomonas aeruginosa PAO1] Length = 316 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 167/291 (57%), Positives = 205/291 (70%) Query: 1 MDRIKLHDLRCFDAVATKGSFQAAGIALNRSHPSVFAAVARLEQQLGLTLFDRSGYRIGL 60 M LHDL+CFDAV G FQAA L+RSHP+VFAAVARLE+QLGL L +R GYR+GL Sbjct: 1 MHDFTLHDLQCFDAVVDAGGFQAAAQRLHRSHPAVFAAVARLERQLGLALLERGGYRVGL 60 Query: 61 TDAGRTFHARAQVTLREFELLQGYAEQLAGGEEVVLRIVIGDLCPRPPVLQMLSEFFARY 120 T AGR+FH RAQ L E E L+G+A LA GEE LR+V+GDLCP P L +L+ FF Sbjct: 61 TAAGRSFHQRAQALLYELEGLRGHAAHLAQGEESELRVVLGDLCPPRPALALLAGFFGSQ 120 Query: 121 PNTRLHLEYEAVGGPLERLIDDNADLVFHRAEPSDPRFEQIKLSTTAMVPVVAPGFLPFA 180 P TRL L +E V GPLERL+D ADL+ HR + SDPR E + L +VPV+APG L Sbjct: 121 PQTRLQLLFETVSGPLERLLDGEADLILHRVDKSDPRLEWLDLCRVGLVPVIAPGLLGDP 180 Query: 181 WTKKVTPEHMRPFTQCVIRDTARRPSPENFFLIDGAHQCSVPDQMMKKELILHRLAWGHL 240 + V PE +RPF QCV+RD+AR P ++F++ GA QCSVPDQ KKE+IL L WGHL Sbjct: 181 PPRPVRPEQLRPFAQCVMRDSARHSPPTDYFMLAGARQCSVPDQRTKKEVILQGLGWGHL 240 Query: 241 PAWLIEDELRDGRLISIAGPNFPGREENLAAVRRRQHLHGPVAEALWLHLK 291 P +LI++EL DGRL+++AGP+ PGR E + A RRR GPVAE LW L+ Sbjct: 241 PDFLIDEELADGRLLALAGPHLPGRSEEVVAARRRDRAQGPVAERLWAFLR 291 >gb|EGM14765.1| transcriptional regulator [Pseudomonas aeruginosa 138244] Length = 316 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 166/291 (57%), Positives = 205/291 (70%) Query: 1 MDRIKLHDLRCFDAVATKGSFQAAGIALNRSHPSVFAAVARLEQQLGLTLFDRSGYRIGL 60 M LHDL+CFDAV G FQAA L+RSHP+VFAAVARLE+QLGL L +R GYR+GL Sbjct: 1 MHDFTLHDLQCFDAVVDAGGFQAAAQRLHRSHPAVFAAVARLERQLGLALLERGGYRVGL 60 Query: 61 TDAGRTFHARAQVTLREFELLQGYAEQLAGGEEVVLRIVIGDLCPRPPVLQMLSEFFARY 120 T AGR+FH RAQ L E E L+G+A LA GEE LR+V+GDLCP P L +L+ FF Sbjct: 61 TAAGRSFHQRAQALLYELEGLRGHAAHLAQGEESELRVVLGDLCPPRPALALLAGFFGSQ 120 Query: 121 PNTRLHLEYEAVGGPLERLIDDNADLVFHRAEPSDPRFEQIKLSTTAMVPVVAPGFLPFA 180 P TRL L +E V GPLERL+D ADL+ HR + SDPR E + L +VPV+APG L Sbjct: 121 PQTRLQLLFETVSGPLERLLDGEADLILHRVDKSDPRLEWLDLCRVGLVPVIAPGLLGDP 180 Query: 181 WTKKVTPEHMRPFTQCVIRDTARRPSPENFFLIDGAHQCSVPDQMMKKELILHRLAWGHL 240 + V PE +RPF QCV+RD+AR P ++F++ GA QCSVPDQ KKE+IL L WGHL Sbjct: 181 PPRPVRPEQLRPFAQCVMRDSARHSPPTDYFMLAGARQCSVPDQRTKKEVILQGLGWGHL 240 Query: 241 PAWLIEDELRDGRLISIAGPNFPGREENLAAVRRRQHLHGPVAEALWLHLK 291 P +L+++EL DGRL+++AGP+ PGR E + A RRR GPVAE LW L+ Sbjct: 241 PDFLVDEELADGRLLALAGPHLPGRSEEVVAARRRDRAQGPVAERLWAFLR 291