BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0228.0010.p (290 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002360729.1| pyridoxal kinase [Methylocella silvestris BL... 248 9e-64 ref|YP_003836297.1| pyridoxal kinase [Micromonospora aurantiaca ... 236 3e-60 ref|ZP_01459603.1| pyridoxal kinase [Stigmatella aurantiaca DW4/... 236 3e-60 ref|YP_004109024.1| pyridoxal kinase [Rhodopseudomonas palustris... 236 4e-60 ref|YP_569435.1| pyridoxal kinase [Rhodopseudomonas palustris Bi... 235 6e-60 >ref|YP_002360729.1| pyridoxal kinase [Methylocella silvestris BL2] gb|ACK49367.1| pyridoxal kinase [Methylocella silvestris BL2] Length = 287 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 141/267 (52%), Positives = 174/267 (65%), Gaps = 5/267 (1%) Query: 3 VISIQSQVAWGHVGNSAASFPIQLHGIDVVAVPTTLLSNRPGYPTIRGRVLDVQLVADLL 62 +ISIQSQV G VG++AA FP+Q G+ V AVPTTLLSN P YPT+RGRVLD LVADLL Sbjct: 20 IISIQSQVVHGSVGHNAALFPMQALGVAVAAVPTTLLSNHPRYPTLRGRVLDAPLVADLL 79 Query: 63 RGIEERGAVEAARLILSGYLGSADIAMDVADFVARAKAANPALLYCCDPVLGDRDRGMFV 122 G+ ERG +EA+ ++L+GYLGSA+I V DFV RAKA NP L Y CDPV+GD + G+FV Sbjct: 80 LGVAERGLIEASSILLTGYLGSAEIGAVVGDFVDRAKARNPQLAYLCDPVIGDDEPGVFV 139 Query: 123 RSDIPPLVRDELCPLADIITPNHFEFEFLCGARVTTIDDVVAQASALMARGPQTIVITSA 182 + L+RD L P A I+TPN FE E L GA I + A+ + ARGP +V+T Sbjct: 140 APGLVDLIRDRLVPAAAILTPNQFELEILAGAPARDIYALRRAAALISARGPGRVVVTGC 199 Query: 183 ELAGTPQSEIETLAIERTQSDKICAWRVRTPRIPISPSGTGDLFAALFVAARARGLATPD 242 LA TP+ IET+ E SD I R+ T R+PI P+G GDLFA L A ARG Sbjct: 200 ALADTPRDCIETVVCE---SDVI--HRIATVRLPIRPNGAGDLFAGLLAAHLARGRPLIA 254 Query: 243 ALSHAASGIYGVLERTAQRGTEEMRII 269 A AA G+ VL RT G+ E+RI+ Sbjct: 255 ASESAARGVSSVLARTLAEGSYELRIV 281 >ref|YP_003836297.1| pyridoxal kinase [Micromonospora aurantiaca ATCC 27029] ref|YP_004084824.1| pyridoxal kinase [Micromonospora sp. L5] gb|ADL46721.1| pyridoxal kinase [Micromonospora aurantiaca ATCC 27029] gb|ADU10673.1| pyridoxal kinase [Micromonospora sp. L5] Length = 283 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 130/284 (45%), Positives = 173/284 (60%), Gaps = 5/284 (1%) Query: 1 MTVISIQSQVAWGHVGNSAASFPIQLHGIDVVAVPTTLLSNRPGYPTIRGRVLDVQLVAD 60 M ++SIQS VA+GHVGNSAA FP+Q +V V T SN GY RG +L VAD Sbjct: 1 MKILSIQSSVAYGHVGNSAAVFPLQRLRHEVWPVLTVHFSNHTGYGAWRGPLLAPTDVAD 60 Query: 61 LLRGIEERGAVEAARLILSGYLGSADIAMDVADFVARAKAANPALLYCCDPVLGDRDRGM 120 ++ GIE+RG + A +LSGY G + + D VAR KAANPA LYCCDPV+GD RGM Sbjct: 61 VIAGIEDRGVLGTADAVLSGYQGDPAVGAVILDAVARVKAANPAALYCCDPVMGDVGRGM 120 Query: 121 FVRSDIPPLVRDELCPLADIITPNHFEFEFLCGARVTTIDDVVAQASALMARGPQTIVIT 180 FVR IP +RD + P ADI+TPN FE EFL G T+DD++A + A GP+ +++T Sbjct: 121 FVRPGIPEYLRDTVVPRADIVTPNQFELEFLAGRTTDTVDDLLAAVDTVRATGPRHVLVT 180 Query: 181 SAELAGTPQSEIETLAIERTQSDKICAWRVRTPRIPISPSGTGDLFAALFVAARARGLAT 240 S P +E +A+ SD AW V TP +PI+P+G GD+ AAL++A A + Sbjct: 181 SVLHGDLPAGHLEVVAV----SDD-GAWAVTTPLLPIAPNGGGDVTAALYLAHLATTGSP 235 Query: 241 PDALSHAASGIYGVLERTAQRGTEEMRIIESAGVMLDPKPRFAA 284 AL + IY VLE T + GT E++++ + + DP RF A Sbjct: 236 KTALERTTNSIYAVLEATLEAGTRELQLVAAQDAIADPPTRFTA 279 >ref|ZP_01459603.1| pyridoxal kinase [Stigmatella aurantiaca DW4/3-1] ref|YP_003949700.1| pyridoxamine kinase [Stigmatella aurantiaca DW4/3-1] gb|EAU69683.1| pyridoxal kinase [Stigmatella aurantiaca DW4/3-1] gb|ADO67873.1| Pyridoxamine kinase [Stigmatella aurantiaca DW4/3-1] Length = 285 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 123/290 (42%), Positives = 177/290 (61%), Gaps = 7/290 (2%) Query: 1 MTVISIQSQVAWGHVGNSAASFPIQLHGIDVVAVPTTLLSNRPGYPTIRGRVLDVQLVAD 60 M ++SIQS VA+G+VGN +A+FP+Q G +V V T SN GY RG++ + VA+ Sbjct: 1 MAILSIQSHVAYGYVGNRSAAFPLQRLGHEVWPVNTVQFSNHSGYGRWRGQIFEASHVAE 60 Query: 61 LLRGIEERGAVEAARLILSGYLGSADIAMDVADFVARAKAANPALLYCCDPVLGDRDRGM 120 ++ GI ERGA+ + +LSGY+G A + + VA+A+AANP LYCCDPV+GD RG+ Sbjct: 61 VIAGIAERGAMAQCQAVLSGYMGDAATGEVILEAVAQARAANPRALYCCDPVIGDVGRGV 120 Query: 121 FVRSDIPPLVRDELCPLADIITPNHFEFEFLCGARVTTIDDVVAQASALMARGPQTIVIT 180 FVR IP +R+ P ADI TPN FE E L G V T++D + +AL RGP+ +++T Sbjct: 121 FVRPGIPEFMRERAVPAADITTPNQFELEHLTGRTVRTLEDALEATAALRERGPKVVLVT 180 Query: 181 SAELAGTPQSEIETLAIERTQSDKICAWRVRTPRIPIS--PSGTGDLFAALFVAARARGL 238 S + G P +E LA + + AWRV TP +PI P+G GD AALF+A RG Sbjct: 181 SLQREGAPSGTVEMLA-----ATEAGAWRVHTPLLPIQPPPNGAGDAVAALFLAHLLRGR 235 Query: 239 ATPDALSHAASGIYGVLERTAQRGTEEMRIIESAGVMLDPKPRFAAVAIA 288 + +AL A+ I+G+L T G+ E+++I + ++ P RF +A Sbjct: 236 SAGEALGETAASIFGILAATHAAGSRELQLIAAQDELVSPTQRFTVEQVA 285 >ref|YP_004109024.1| pyridoxal kinase [Rhodopseudomonas palustris DX-1] gb|ADU44291.1| pyridoxal kinase [Rhodopseudomonas palustris DX-1] Length = 288 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 128/274 (46%), Positives = 171/274 (62%), Gaps = 8/274 (2%) Query: 2 TVISIQSQVAWGHVGNSAASFPIQLHGIDVVAVPTTLLSNRPGYPTIRGRVLDVQLVADL 61 ++ISIQSQV GHVGNSAA P+Q HG++V AVPTTLLSN PG+ T RGRVLD +LV DL Sbjct: 11 SIISIQSQVVHGHVGNSAAVLPMQAHGLNVAAVPTTLLSNHPGFETTRGRVLDAELVGDL 70 Query: 62 LRGIEERGAVEAARLILSGYLGSADIAMDVADFVARAKAANPALLYCCDPVLGDRDRGMF 121 LRG+EERG +E +R I+SGYLGS VA F+ RA+ NPA+ Y CDPV+GD G+F Sbjct: 71 LRGVEERGLIETSRYIVSGYLGSRANGEMVAAFIKRARQLNPAITYICDPVMGDAHVGVF 130 Query: 122 VRSDIPPLVRDELCPLADIITPNHFEFEFLCGARVTTIDDVVAQASALMARGPQTIVITS 181 V + + DEL PLAD++TPN FE + G+ TT ++ A + +V+TS Sbjct: 131 VPDQVVACICDELIPLADLLTPNQFEVGLIAGSAPTTWSELEAAVHKIQTWRNARVVVTS 190 Query: 182 AELAGTPQSEIETLAIERTQSDKICAWRVRTPRIPISPSGTGDLFAALFVAARARGLATP 241 LA TP +E + E S R+ + R+ ++ +GTGDL+ L A AR L+ Sbjct: 191 CRLADTPNDSLENIVFEDAAST-----RLPSLRLELAAAGTGDLYTGLLAAGLARNLSLV 245 Query: 242 DALSHAASGIYGVLERTAQRGTEEMRIIESAGVM 275 DA AA+ + VL+RT G EM++ AGV+ Sbjct: 246 DAARRAAAIVLEVLKRTMAAGEREMQL---AGVI 276 >ref|YP_569435.1| pyridoxal kinase [Rhodopseudomonas palustris BisB5] gb|ABE39534.1| Pyridoxal kinase [Rhodopseudomonas palustris BisB5] Length = 288 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 122/267 (45%), Positives = 171/267 (64%), Gaps = 5/267 (1%) Query: 2 TVISIQSQVAWGHVGNSAASFPIQLHGIDVVAVPTTLLSNRPGYPTIRGRVLDVQLVADL 61 ++ISIQSQV GHVGNSAA P+Q HG++V AVPTTLLSN PG+ T+RGRVL+ +LV DL Sbjct: 11 SIISIQSQVVHGHVGNSAAVLPMQAHGLNVAAVPTTLLSNPPGFATMRGRVLEPELVGDL 70 Query: 62 LRGIEERGAVEAARLILSGYLGSADIAMDVADFVARAKAANPALLYCCDPVLGDRDRGMF 121 LRG+EERG +E +R I+SGYLGS VA F+ RA+ NPA+ Y CDPV+GD G+F Sbjct: 71 LRGVEERGLLETSRYIVSGYLGSRANGEVVAAFIKRARQINPAITYICDPVMGDAHLGVF 130 Query: 122 VRSDIPPLVRDELCPLADIITPNHFEFEFLCGARVTTIDDVVAQASALMARGPQTIVITS 181 V + + D L PLAD++TPN FE + G +++T +++ A + A +V+TS Sbjct: 131 VADQVVECLCDALVPLADLLTPNQFEIGLITGRQLSTWNELETAALQIQAARGARLVVTS 190 Query: 182 AELAGTPQSEIETLAIERTQSDKICAWRVRTPRIPISPSGTGDLFAALFVAARARGLATP 241 +L+ TP+ +E + E S R+ +PR+P++P GTGDL+ L A ARG Sbjct: 191 CKLSDTPEGTLENIVFEDKSST-----RLTSPRLPMAPVGTGDLYTGLLTAKLARGATLV 245 Query: 242 DALSHAASGIYGVLERTAQRGTEEMRI 268 +A AA+ + VL +T EM++ Sbjct: 246 EAARQAAATVLQVLGQTMAADEHEMQL 272