BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0227.0023.p (266 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01046727.1| hypothetical protein NB311A_13226 [Nitrobacte... 230 2e-58 ref|YP_579034.1| hypothetical protein Nham_3876 [Nitrobacter ham... 229 3e-58 ref|NP_774675.1| hypothetical protein bll8035 [Bradyrhizobium ja... 210 1e-52 ref|ZP_01048554.1| hypothetical protein NB311A_00340 [Nitrobacte... 162 4e-38 ref|NP_946594.1| late embryogenesis abundant protein [Rhodopseud... 107 2e-21 >ref|ZP_01046727.1| hypothetical protein NB311A_13226 [Nitrobacter sp. Nb-311A] gb|EAQ35280.1| hypothetical protein NB311A_13226 [Nitrobacter sp. Nb-311A] Length = 332 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 130/254 (51%), Positives = 177/254 (69%), Gaps = 11/254 (4%) Query: 1 LKEQISDTADDIRHKVSPQHIKSEVTDYVSQKTQSWVEGLKQQIMDNPMRAVAAGAALGV 60 L+EQ+SDTA+++R+KVSPQ IKSEV+++VS+KT SW++GLKQ+ M+NPM+A+AAG A+ V Sbjct: 26 LREQLSDTAEELRYKVSPQGIKSEVSEFVSRKTYSWLDGLKQRAMENPMQAIAAGTAVAV 85 Query: 61 PLLRLVRGTPLPLLMIGAGLALTSKTVRNRAADASGLVMDKAGRLLEEVTEGARSMPG-- 118 P LRL RG PLPLLM+GAGL LTSK++R RAADA+ +K + E RS Sbjct: 86 PALRLARGFPLPLLMMGAGLVLTSKSMRVRAADAAAPAAEKVKEMAAEAASRVRSFGESA 145 Query: 119 ---------DVKETLSFAQSRAAGMADDAQDKAAGLAADLRANAAQAASFASEKLKSGMD 169 DV + LS AQ++AAGMAD+ D+AA ++A+ A+ A K++ Sbjct: 146 IDAASRTGRDVADKLSEAQAKAAGMADNLTDRAARSTDRVKASLDTASETAKAKIEQFSS 205 Query: 170 AAKDAAASAPDQARQTIGDNAALIGGLGIAIGAIIAAALPETKAEGKVMGGASDGVRQAA 229 +D A +AP+ A+Q IGDNAALI GLG+A GAIIAA+LP T+AE V G AS GV++ A Sbjct: 206 TVRDKANAAPETAQQMIGDNAALIAGLGVAFGAIIAASLPATQAEAAVFGKASVGVKRTA 265 Query: 230 AAAMQSGVQAARDA 243 A+QSG++ A+DA Sbjct: 266 GQAVQSGLEEAKDA 279 >ref|YP_579034.1| hypothetical protein Nham_3876 [Nitrobacter hamburgensis X14] gb|ABE64574.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 333 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 134/254 (52%), Positives = 177/254 (69%), Gaps = 11/254 (4%) Query: 1 LKEQISDTADDIRHKVSPQHIKSEVTDYVSQKTQSWVEGLKQQIMDNPMRAVAAGAALGV 60 L+EQI+DTA+D+R+KVSPQ IKSEV+++VS++T SW++ LKQQIM+NPM+A+AAG A+ V Sbjct: 26 LREQITDTAEDLRYKVSPQGIKSEVSEFVSRQTHSWLDALKQQIMENPMQAIAAGTAVAV 85 Query: 61 PLLRLVRGTPLPLLMIGAGLALTSKTVRNRAADASGLVMDKAGRLLEEVTEGARSMPGD- 119 P LRL RG PLPLLM+GAGLALTSK++R R ADA+ ++K + E E +S D Sbjct: 86 PALRLARGFPLPLLMMGAGLALTSKSMRARVADAAAPAVEKVKEMAGEAAERVQSFGEDA 145 Query: 120 ----------VKETLSFAQSRAAGMADDAQDKAAGLAADLRANAAQAASFASEKLKSGMD 169 + +S AQS AAGMADD D+AA ++A A+ A K++ Sbjct: 146 VDAASQTGRRATDRISEAQSWAAGMADDLTDRAARTTDRVKAGLDAASETAKAKIEQVGS 205 Query: 170 AAKDAAASAPDQARQTIGDNAALIGGLGIAIGAIIAAALPETKAEGKVMGGASDGVRQAA 229 +D A +AP+ ARQ IGDNAALI GLG+AIGAIIAA+LP T AE +G AS GV++AA Sbjct: 206 TIRDKATAAPETARQMIGDNAALIAGLGVAIGAIIAASLPATPAEAAAIGKASGGVKRAA 265 Query: 230 AAAMQSGVQAARDA 243 A+QSG +AA+DA Sbjct: 266 GKAVQSGFEAAKDA 279 >ref|NP_774675.1| hypothetical protein bll8035 [Bradyrhizobium japonicum USDA 110] dbj|BAC53300.1| bll8035 [Bradyrhizobium japonicum USDA 110] Length = 370 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 143/244 (58%), Positives = 178/244 (72%) Query: 1 LKEQISDTADDIRHKVSPQHIKSEVTDYVSQKTQSWVEGLKQQIMDNPMRAVAAGAALGV 60 LK+ +SDT D+R V+PQ IKSEV+DYVS Q WV+ LKQ++M+NP+ AVAAG A+ V Sbjct: 76 LKQGLSDTKQDLRDMVTPQRIKSEVSDYVSDTAQGWVKELKQKMMNNPLGAVAAGTAVAV 135 Query: 61 PLLRLVRGTPLPLLMIGAGLALTSKTVRNRAADASGLVMDKAGRLLEEVTEGARSMPGDV 120 PLLRL RG PLPLLMI AGLALTSK+VR+RAA+A VMD A R ++E E + Sbjct: 136 PLLRLARGVPLPLLMITAGLALTSKSVRDRAAEAVSPVMDGASRFIDETAERVQEAKSGA 195 Query: 121 KETLSFAQSRAAGMADDAQDKAAGLAADLRANAAQAASFASEKLKSGMDAAKDAAASAPD 180 + LS +Q RAAG +DA D A A DL+A A +AA + + GMDA KD+A +AP+ Sbjct: 196 QAKLSESQGRAAGAVNDAMDAAKTSADDLKARATEAAGAIGDNITRGMDAIKDSANAAPE 255 Query: 181 QARQTIGDNAALIGGLGIAIGAIIAAALPETKAEGKVMGGASDGVRQAAAAAMQSGVQAA 240 QARQ IGDNAALIGGLGIAIGAIIAAALPETK E + G ASD +++AA A +SG++AA Sbjct: 256 QARQIIGDNAALIGGLGIAIGAIIAAALPETKFEDRTAGPASDSLKRAAGEAAESGLEAA 315 Query: 241 RDAT 244 +DAT Sbjct: 316 KDAT 319 >ref|ZP_01048554.1| hypothetical protein NB311A_00340 [Nitrobacter sp. Nb-311A] gb|EAQ33495.1| hypothetical protein NB311A_00340 [Nitrobacter sp. Nb-311A] Length = 333 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 122/237 (51%), Positives = 168/237 (70%), Gaps = 7/237 (2%) Query: 1 LKEQISDTADDIRHKVSPQHIKSEVTDYVSQKTQSWVEGLKQQIMDNPMRAVAAGAALGV 60 LKE+ISD A+DIRHK SP+H+KSE ++YVS KT SW E LKQ++MDNPM VAAGA + Sbjct: 48 LKERISDAAEDIRHKTSPEHVKSEFSNYVSLKTHSWAEALKQRVMDNPMGTVAAGAVAAI 107 Query: 61 PLLRLVRGTPLPLLMIGAGLALTSKTVRNRAADASGLVMDKAGRLLEEVTEGARSMPGDV 120 PL+RLVRG PLPLLM+GAGL LTSKT R+RAA + + +KA +L+E G + + Sbjct: 108 PLVRLVRGAPLPLLMLGAGLLLTSKTARDRAAQGAASLKEKADEMLDEA--GTSEVLVGM 165 Query: 121 KETLSFAQSRAAGMADDAQDKAAGLAADLRANAAQAASFASEKLKSGMDAAKDAAASAPD 180 K+ L+ A+++AA MA + + +A+ +A+ + ++++A ++ A +DAAA+ Sbjct: 166 KDRLASARTQAADMAIEVKTQASQVASTW-GDKVGSSAYA---IRDKTIATRDAAATGWS 221 Query: 181 QARQTIGDNAALIGGLGIAIGAIIAAALPETKAEGKVMGGASDGVRQAAAAAMQSGV 237 + R+ GD AALIGGLGIAIGAI+AAALPET+AE K MG ASD V+Q A ++SG Sbjct: 222 KTRELTGD-AALIGGLGIAIGAIVAAALPETRAEAKAMGQASDKVKQKAGEGVRSGF 277 >ref|NP_946594.1| late embryogenesis abundant protein [Rhodopseudomonas palustris CGA009] emb|CAE26686.1| hypothetical protein RPA1243 [Rhodopseudomonas palustris CGA009] Length = 388 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 101/321 (31%), Positives = 142/321 (44%), Gaps = 84/321 (26%) Query: 1 LKEQISDTADDIRHKVSPQHIKSEVTDYVSQKTQSWVEGLKQQIMDNPMRAVAAGAALGV 60 L+ ++DTA+D+R K SP IK+EV +Y+ + + +G++ I +NP++AVA GA L Sbjct: 29 LRATVTDTANDVREKYSPAAIKAEVNNYIKSRGEDLADGVRDSIRNNPVQAVAVGATLAY 88 Query: 61 PLLRLVRGTPLPLLMIGAGLAL----TSKTVRNRAADASGLVMDKAGRL----------- 105 PL ++VR P P+LMIGAGL L + + RA+DA+ D AG L Sbjct: 89 PLWKIVRSIPTPVLMIGAGLYLAGTRSGTELTQRASDAA---RDFAGDLERRARDFSADA 145 Query: 106 ------LEEVTEGARSMPGDVKETLS--FAQSRAAGMAD---DAQD-------------- 140 E GA G++ T + F Q+ A AD QD Sbjct: 146 ADTAVAAREYASGAIDAAGEIVATRADQFRQAATATAADLKHKGQDLGRSVSESSDELRR 205 Query: 141 ------------------KAAGLAA----DLRANAAQAASFASEKLKSGMDAAKDAAASA 178 + AGLA +R A AA+ E L DA DAA+ Sbjct: 206 RASAAGEAFAGEADQLAARGAGLAGMVVDTVRDRAGDAATKMRETLHDTRDAGMDAASRL 265 Query: 179 PDQ-----------ARQTIGDNAALIGGLGIAIGAIIAAALPETKAEGKVMG-----GAS 222 DQ A+QT+ D+ L+ G G+ IG +IA+A P +A G +G GA Sbjct: 266 RDQATDFGNRATKTAKQTLTDHPLLVAGAGLLIGGLIASAFPRVRASGTRVGRQVAAGAK 325 Query: 223 DGVRQAAA---AAMQSGVQAA 240 D V + A AA Q Q A Sbjct: 326 DMVTRGAEKGQAAYQGAAQEA 346