BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0227.0008.p (479 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08138480.1| hypothetical protein G1E_04162 [Pseudomonas s... 657 0.0 ref|NP_744084.1| hypothetical protein PP_1931 [Pseudomonas putid... 649 0.0 ref|YP_001750171.1| transposase IS4 family protein [Pseudomonas ... 644 0.0 gb|AAN62296.1|AF440524_83 transposase domain protein [Pseudomona... 639 0.0 ref|YP_112390.1| transposase [uncultured bacterium] >gi|53136973... 639 0.0 >ref|ZP_08138480.1| hypothetical protein G1E_04162 [Pseudomonas sp. TJI-51] gb|EGC00231.1| hypothetical protein G1E_04162 [Pseudomonas sp. TJI-51] Length = 478 Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/477 (64%), Positives = 377/477 (79%), Gaps = 1/477 (0%) Query: 1 MRRFVEEADRGQRTLLPECLDDFIDESNPVRVIDVFVDALGLAEMGFEGVEPAATGRPSY 60 M+RF+E R Q TLLPECLDD++ E NPVRV+DVFVD L L +GF+GV+PAATGRP+Y Sbjct: 1 MKRFIEGEARTQVTLLPECLDDYVTEENPVRVVDVFVDELDLGALGFDGVDPAATGRPAY 60 Query: 61 HPSVLLKLYIYGYLNRVQSSRRLEREAGRNVEVMWLLGRLAPDHKTIADFRKDNGLALRK 120 HP+VLLK+YIYGYLNR+QSSRRLEREA RNVE+MWL GRLAPD KTIADFR+DNG A+R Sbjct: 61 HPAVLLKIYIYGYLNRIQSSRRLEREAERNVELMWLTGRLAPDFKTIADFRRDNGKAIRS 120 Query: 121 VCARFVELCREMGLLATASVAIDGSKFKAVNNRDRNFTRAKVERRRAQLEESVARYLSQL 180 VC +FV LCR + L + + +AIDGSKFKAVNNRDRNFT+ KV+ R Q+E+S+ RYL+ + Sbjct: 121 VCRQFVVLCRNLNLFSQSIIAIDGSKFKAVNNRDRNFTQGKVKARMQQVEQSIDRYLAAM 180 Query: 181 DTADRQEPTEALGTKVTRLTEKLTKLKDELGKLAVYEKQMLASPDQQISLTDPDSRSMAT 240 D+ADR P E K RL +K+ KLK ++ KL E Q+ AS DQQISLTDPD+RSMAT Sbjct: 181 DSADRAAP-EVAEAKTERLKDKVEKLKQQMQKLKDIEAQLQASSDQQISLTDPDARSMAT 239 Query: 241 SGRGSGVVGYNVQVAVDTEHHLIVTHEVTNSGSDRAQLANMAKQAKAVLKSETLEAVADR 300 SGRGSG VGYNVQ AVD +HHLI+ HEVTN G+DR QL+NMA QA+ + +E L VADR Sbjct: 240 SGRGSGTVGYNVQTAVDDKHHLIIAHEVTNVGNDRGQLSNMANQAREEIGAEPLTVVADR 299 Query: 301 GYFNSPEILACHEAGITVTLPKPQTSGAKSEGRFGKQDFAYLSEEDAYRCPAGERLRYRY 360 GY+ PEILAC +AGIT +PKP TS +K+EGRFGKQDF Y++ D YRCPAG+ L R+ Sbjct: 300 GYYKGPEILACEQAGITTFVPKPLTSSSKAEGRFGKQDFIYIAASDEYRCPAGQLLTRRH 359 Query: 361 TSEEDGKMLRRYWTTACQNCSLKSQCTTGPERRITRWDHEHLLEAVQQRLDANPEAMRQR 420 +S EDG +L YW + CQ+CS++ QCTTG ERR+ RW+HE ++E VQ RL+ +P M+ R Sbjct: 360 SSVEDGMLLHCYWFSGCQSCSMQKQCTTGKERRLKRWEHEAVVEKVQIRLEHDPGKMKVR 419 Query: 421 RETVEHPFGTIKARMGATHFLTKTLPKVAAEMALSVLAYNLTRVMNIVGIKPLITAI 477 R+TVEHPFGTIK MG+THFLTKTLP+V+ EM+L VLAYNL R+M+I GI L+ AI Sbjct: 420 RQTVEHPFGTIKFWMGSTHFLTKTLPRVSTEMSLHVLAYNLKRMMSIFGIAGLLEAI 476 >ref|NP_744084.1| hypothetical protein PP_1931 [Pseudomonas putida KT2440] gb|AAN67548.1|AE016383_10 conserved hypothetical protein [Pseudomonas putida KT2440] Length = 478 Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 298/479 (62%), Positives = 379/479 (79%), Gaps = 1/479 (0%) Query: 1 MRRFVEEADRGQRTLLPECLDDFIDESNPVRVIDVFVDALGLAEMGFEGVEPAATGRPSY 60 M+RF+E R Q TLLPECLDD++ + NPVRV+DVFVD L L + F GV+PAATGRP+Y Sbjct: 1 MKRFIEGEARTQVTLLPECLDDYVTDENPVRVVDVFVDELDLGALDFAGVDPAATGRPAY 60 Query: 61 HPSVLLKLYIYGYLNRVQSSRRLEREAGRNVEVMWLLGRLAPDHKTIADFRKDNGLALRK 120 HP+VLLK+YIYGYLNR+QSSRRLEREA RNVE+MWL GRLAPD KTIADFRKDNG A+R Sbjct: 61 HPAVLLKIYIYGYLNRIQSSRRLEREAERNVELMWLTGRLAPDFKTIADFRKDNGKAIRS 120 Query: 121 VCARFVELCREMGLLATASVAIDGSKFKAVNNRDRNFTRAKVERRRAQLEESVARYLSQL 180 VC +FV LCR + L + + +AIDGSKFKAVNNRDRNFT+AKV+ R Q+E+S+ RYL+ + Sbjct: 121 VCRQFVILCRNLNLFSESIIAIDGSKFKAVNNRDRNFTQAKVKARMQQIEQSIERYLTAM 180 Query: 181 DTADRQEPTEALGTKVTRLTEKLTKLKDELGKLAVYEKQMLASPDQQISLTDPDSRSMAT 240 D+ADR P A+ K RL EK+ LK ++ KL E Q+L +PD+QISLTDPD+RSM+ Sbjct: 181 DSADRAMPEVAMA-KAERLKEKIETLKQQMQKLKDIETQLLQTPDKQISLTDPDARSMSV 239 Query: 241 SGRGSGVVGYNVQVAVDTEHHLIVTHEVTNSGSDRAQLANMAKQAKAVLKSETLEAVADR 300 GRGSG VGYNVQ AVD +HHLI+ HEVTN G DR QL+NMAKQA+ + +E+L VADR Sbjct: 240 GGRGSGTVGYNVQTAVDDQHHLIIAHEVTNVGHDRGQLSNMAKQARDQIGAESLTVVADR 299 Query: 301 GYFNSPEILACHEAGITVTLPKPQTSGAKSEGRFGKQDFAYLSEEDAYRCPAGERLRYRY 360 GY+ EI+AC +AGI+ +PKP TS +K+EGRFGKQDF Y+S D YRCPAG+ L RY Sbjct: 300 GYYTGTEIVACEQAGISPFVPKPLTSSSKAEGRFGKQDFLYVSTSDEYRCPAGQLLTKRY 359 Query: 361 TSEEDGKMLRRYWTTACQNCSLKSQCTTGPERRITRWDHEHLLEAVQQRLDANPEAMRQR 420 ++ EDG ++ YW + CQ+C++ QCTTG ERR+ RW+HE +L+++Q +L+ +P M+ R Sbjct: 360 STWEDGMLMHVYWFSGCQSCAMHKQCTTGKERRLKRWEHEAVLDSMQVQLEHDPGKMKVR 419 Query: 421 RETVEHPFGTIKARMGATHFLTKTLPKVAAEMALSVLAYNLTRVMNIVGIKPLITAIEA 479 R+TVEHPFGT+K MGATHFLT+TLP+V+ EM+L VLAYNL R+M+I+GIK L+ AI+A Sbjct: 420 RQTVEHPFGTLKYWMGATHFLTRTLPRVSTEMSLHVLAYNLKRMMSILGIKGLLKAIKA 478 >ref|YP_001750171.1| transposase IS4 family protein [Pseudomonas putida W619] gb|ACA73802.1| transposase IS4 family protein [Pseudomonas putida W619] Length = 478 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 297/478 (62%), Positives = 378/478 (79%), Gaps = 1/478 (0%) Query: 1 MRRFVEEADRGQRTLLPECLDDFIDESNPVRVIDVFVDALGLAEMGFEGVEPAATGRPSY 60 M+RF+E R Q TLLPECLDD+I + NPVRV+DVFVD L L+ +GF GV+PAATGRP+Y Sbjct: 1 MKRFIEGEARTQVTLLPECLDDYITDENPVRVVDVFVDELDLSALGFAGVDPAATGRPAY 60 Query: 61 HPSVLLKLYIYGYLNRVQSSRRLEREAGRNVEVMWLLGRLAPDHKTIADFRKDNGLALRK 120 HP+VLLK+YIYGYLNR+QSSRRLEREA RNVE+MWL GRLAPD KTIADFRKDNG A+R Sbjct: 61 HPAVLLKIYIYGYLNRIQSSRRLEREAERNVELMWLTGRLAPDFKTIADFRKDNGKAIRS 120 Query: 121 VCARFVELCREMGLLATASVAIDGSKFKAVNNRDRNFTRAKVERRRAQLEESVARYLSQL 180 VC +FV LCR + L + + +AIDGSKFKAVNNRDRNFT+AKV+ R Q+E+S+ RYL+ + Sbjct: 121 VCRQFVILCRNLNLFSDSIIAIDGSKFKAVNNRDRNFTQAKVKARMQQVEQSIERYLTAM 180 Query: 181 DTADRQEPTEALGTKVTRLTEKLTKLKDELGKLAVYEKQMLASPDQQISLTDPDSRSMAT 240 D+ADR P A+ K RL EK+ LK ++ KL E Q+L +PD+QISLTDPD+RSM+ Sbjct: 181 DSADRAMPEVAVA-KAERLKEKIETLKQQMQKLKDIETQLLQTPDKQISLTDPDARSMSV 239 Query: 241 SGRGSGVVGYNVQVAVDTEHHLIVTHEVTNSGSDRAQLANMAKQAKAVLKSETLEAVADR 300 GRGSG VGYNVQ AVD +HHLIV HEVTN G DR QL+NMAKQA+ + +E+L VADR Sbjct: 240 GGRGSGTVGYNVQTAVDDQHHLIVAHEVTNVGHDRGQLSNMAKQARDQIGTESLNVVADR 299 Query: 301 GYFNSPEILACHEAGITVTLPKPQTSGAKSEGRFGKQDFAYLSEEDAYRCPAGERLRYRY 360 GY+ EI+AC +AGI+ +PKP TS +K+EGRFGKQDF Y+S D YRCPA + L RY Sbjct: 300 GYYTGTEIVACEQAGISPFVPKPLTSSSKAEGRFGKQDFLYVSASDEYRCPAEQLLTKRY 359 Query: 361 TSEEDGKMLRRYWTTACQNCSLKSQCTTGPERRITRWDHEHLLEAVQQRLDANPEAMRQR 420 ++ EDG ++ YW + CQ+C++ QCTTG ERR+ RW+HE L+++Q +L+ +P M+ R Sbjct: 360 STWEDGMLMHVYWFSGCQSCAMHKQCTTGKERRLKRWEHEATLDSMQVQLEHDPGKMKVR 419 Query: 421 RETVEHPFGTIKARMGATHFLTKTLPKVAAEMALSVLAYNLTRVMNIVGIKPLITAIE 478 R+TVEHPFGT+K MGATHFLT+TLP+V+ EM+L VLAYNL R+M+I+GI+ L+ A++ Sbjct: 420 RQTVEHPFGTLKYWMGATHFLTRTLPRVSTEMSLHVLAYNLKRMMSILGIRGLLEALK 477 >gb|AAN62296.1|AF440524_83 transposase domain protein [Pseudomonas aeruginosa] Length = 476 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 302/479 (63%), Positives = 375/479 (78%), Gaps = 3/479 (0%) Query: 1 MRRFVEEADRGQRTLLPECLDDFIDESNPVRVIDVFVDALGLAEMGFEGVEPAATGRPSY 60 M+RF++ RGQ LLPE LDD++ ++NPVRV+DVFVD L L ++GFEGV PA TGRP+Y Sbjct: 1 MKRFIQGEHRGQSALLPESLDDYVADTNPVRVVDVFVDELDLGQLGFEGVVPAETGRPAY 60 Query: 61 HPSVLLKLYIYGYLNRVQSSRRLEREAGRNVEVMWLLGRLAPDHKTIADFRKDNGLALRK 120 HP+ LLK+YIYGYLNR+QSSRRLEREA RNVE+MWL GRL PD KTIA+FRKDNG A+R Sbjct: 61 HPADLLKIYIYGYLNRIQSSRRLEREAQRNVELMWLTGRLMPDFKTIANFRKDNGKAIRG 120 Query: 121 VCARFVELCREMGLLATASVAIDGSKFKAVNNRDRNFTRAKVERRRAQLEESVARYLSQL 180 VC +FV LC+++GL + A VAIDGSKFKAVNNRDRNFT AK++RR ++E S+ RYL+ L Sbjct: 121 VCRQFVVLCQQLGLFSEALVAIDGSKFKAVNNRDRNFTSAKLQRRMEEIESSINRYLTAL 180 Query: 181 DTADRQEPTEALGTKVTRLTEKLTKLKDELGKLAVYEKQMLASPDQQISLTDPDSRSMAT 240 DTADRQEP A K RL +K+ LK +L +L E Q+ +PD+QISLTDPD+RSM T Sbjct: 181 DTADRQEPAVA-KVKAERLHDKIATLKTKLQELKEIEVQLNETPDKQISLTDPDARSMKT 239 Query: 241 SGRGSGVVGYNVQVAVDTEHHLIVTHEVTNSGSDRAQLANMAKQAKAVLKSETLEAVADR 300 RG+GVVGYNVQ AVD +HHLIVTHEVTN G+DR QL+ MAKQA+ + + L AVADR Sbjct: 240 --RGTGVVGYNVQAAVDAKHHLIVTHEVTNDGADRDQLSTMAKQAREAMGVKKLSAVADR 297 Query: 301 GYFNSPEILACHEAGITVTLPKPQTSGAKSEGRFGKQDFAYLSEEDAYRCPAGERLRYRY 360 GYF EILACHEAGITV +PK TSGA + GRFGK DF Y + + YRCPAG+ L +R+ Sbjct: 298 GYFKGEEILACHEAGITVFVPKALTSGATAAGRFGKGDFIYDAANNEYRCPAGQSLIWRF 357 Query: 361 TSEEDGKMLRRYWTTACQNCSLKSQCTTGPERRITRWDHEHLLEAVQQRLDANPEAMRQR 420 + E G L RYW++ CQ C+LK QCT P+RR++RW+HE +LEA+Q RLD PE MR R Sbjct: 358 SRVEKGLKLHRYWSSHCQGCALKEQCTPSPQRRVSRWEHEAVLEAMQSRLDQAPEMMRIR 417 Query: 421 RETVEHPFGTIKARMGATHFLTKTLPKVAAEMALSVLAYNLTRVMNIVGIKPLITAIEA 479 R+TVEHPFGT+K+ MGATHFLT+TL +V+ EM+L VLAYNL RV+N++G L+ A++A Sbjct: 418 RQTVEHPFGTLKSWMGATHFLTRTLDRVSTEMSLHVLAYNLKRVLNVLGSGALMAAMKA 476 >ref|YP_112390.1| transposase [uncultured bacterium] emb|CAG30881.1| transposase [uncultured bacterium] gb|ADU90902.1| TnpA, transposase [uncultured bacterium] Length = 485 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 304/479 (63%), Positives = 375/479 (78%), Gaps = 3/479 (0%) Query: 1 MRRFVEEADRGQRTLLPECLDDFIDESNPVRVIDVFVDALGLAEMGFEGVEPAATGRPSY 60 M+RF++ RGQ LLPE LDD++ ++NPVRV+DVFVD L L ++GFEGV PA TGRP+Y Sbjct: 10 MKRFIQGEHRGQSALLPESLDDYVADTNPVRVVDVFVDELDLGQLGFEGVVPAETGRPAY 69 Query: 61 HPSVLLKLYIYGYLNRVQSSRRLEREAGRNVEVMWLLGRLAPDHKTIADFRKDNGLALRK 120 HP+ LLK+YIYGYLNR+QSSRRLEREA RNVE+MWL GRL PD KTIA+FRKDNG A+R Sbjct: 70 HPADLLKIYIYGYLNRIQSSRRLEREAQRNVELMWLTGRLMPDFKTIANFRKDNGKAIRG 129 Query: 121 VCARFVELCREMGLLATASVAIDGSKFKAVNNRDRNFTRAKVERRRAQLEESVARYLSQL 180 VC +FV LC+++GL + A VAIDGSKFKAVNNRDRNFT AK++RR ++E S+ RYL+ L Sbjct: 130 VCRQFVVLCQQLGLFSEALVAIDGSKFKAVNNRDRNFTSAKLQRRMEEIESSINRYLTAL 189 Query: 181 DTADRQEPTEALGTKVTRLTEKLTKLKDELGKLAVYEKQMLASPDQQISLTDPDSRSMAT 240 DTADRQEP A K RL +K+ LK +L +L E Q+ +PD+QISLTDPD+RSM T Sbjct: 190 DTADRQEPAVA-QVKAERLHDKIATLKTKLRELKEIEVQLNETPDKQISLTDPDARSMKT 248 Query: 241 SGRGSGVVGYNVQVAVDTEHHLIVTHEVTNSGSDRAQLANMAKQAKAVLKSETLEAVADR 300 RGSG+VGYNVQ AVD +HHLIVTHEVTN G DR QL++MAKQA+ + E L AVADR Sbjct: 249 --RGSGMVGYNVQAAVDAKHHLIVTHEVTNDGVDRDQLSSMAKQAREAMGVEELSAVADR 306 Query: 301 GYFNSPEILACHEAGITVTLPKPQTSGAKSEGRFGKQDFAYLSEEDAYRCPAGERLRYRY 360 GYF EILACHEAGITV +PK TSGA + GRFGK DF Y + ++ YRCPAG+ L +RY Sbjct: 307 GYFKGEEILACHEAGITVFVPKTLTSGATAAGRFGKGDFIYDAAKNEYRCPAGQSLIWRY 366 Query: 361 TSEEDGKMLRRYWTTACQNCSLKSQCTTGPERRITRWDHEHLLEAVQQRLDANPEAMRQR 420 +S E G L RYW++ CQ C+LK CT ERR++RW+HE +LEA+Q RLD PE MR R Sbjct: 367 SSVEKGLKLHRYWSSHCQGCALKEHCTPSSERRVSRWEHEAVLEAMQSRLDQAPEMMRIR 426 Query: 421 RETVEHPFGTIKARMGATHFLTKTLPKVAAEMALSVLAYNLTRVMNIVGIKPLITAIEA 479 R+TVEHPFGT+K+ MGATHFLT+TL +V+ EM+L VLAYNL RV+N++G L+ A++A Sbjct: 427 RQTVEHPFGTLKSWMGATHFLTRTLDRVSTEMSLHVLAYNLKRVLNVLGSGALMAAMKA 485