BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0227.0007.p         (269 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774333.1| hypothetical protein bll7693 [Bradyrhizobium ja...   386   e-105
ref|YP_001610288.1| hypothetical protein Btr_2272 [Bartonella tr...    55   1e-05
ref|YP_001609470.1| hypothetical protein Btr_1099 [Bartonella tr...    54   3e-05
ref|ZP_07661585.1| lytic transglycosylase [Roseibium sp. TrichSK...    54   4e-05
ref|YP_002971815.1| lytic transglycolase [Bartonella grahamii as...    52   8e-05

>ref|NP_774333.1| hypothetical protein bll7693 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52958.1| bll7693 [Bradyrhizobium japonicum USDA 110]
          Length = 394

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/254 (72%), Positives = 209/254 (82%), Gaps = 2/254 (0%)

Query: 17  DEPVATKLASLG-QDIVQPLPAGRDASNDAPKVASTQDFRYLVYYVWSELPPAEKPAEIV 75
           D P   +   LG +D+ QP P  R  ++     +  QDFRYL+ YVWSELPPAEKPA IV
Sbjct: 139 DLPPVQESVGLGHRDVAQPAPT-RCGASGGSSNSGPQDFRYLICYVWSELPPAEKPAAIV 197

Query: 76  LRSFKDIPVGTPAEEIKRASDAFGLDFNFMMAVAKIESGFNPNQRTGSYIGLFQLSQYEF 135
           LRSFKDIPVGTP EEIKRASDAFGLDF FM AVAK+ESGF+P QRTGSYIGLFQLS+YEF
Sbjct: 198 LRSFKDIPVGTPVEEIKRASDAFGLDFTFMKAVAKVESGFDPKQRTGSYIGLFQLSKYEF 257

Query: 136 GKFGFGQIRSPRDNAVAAAYKVITEGILFEWITHRKPDLSDLYLIHQQGWEGAAEHISQP 195
           GKFG G I +PRDNAVAAAYKVI EGILF+W+THR+PDL+DLYLIHQQGWEGAAEH+SQP
Sbjct: 258 GKFGSGDILNPRDNAVAAAYKVIIEGILFQWVTHREPDLNDLYLIHQQGWEGAAEHLSQP 317

Query: 196 ARIAWKSMCATSEGKEKGGRWCKRAIWGNALPAFKRTWKSVDNVTSEAFVGMWRGRVAEF 255
            RIAWKSMCATSEG+EKG +WC+RAIW N LPA K  WKSV+ +TSEAFVGMWR RVA F
Sbjct: 318 NRIAWKSMCATSEGREKGEKWCRRAIWRNTLPAVKEAWKSVEKLTSEAFVGMWRERVAHF 377

Query: 256 YTKYVATAAAAASQ 269
           Y+KY+ TA A A +
Sbjct: 378 YSKYMTTATADAER 391


>ref|YP_001610288.1| hypothetical protein Btr_2272 [Bartonella tribocorum CIP 105476]
 emb|CAK02293.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 217

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 89  EEIKRASDAFGLDFNFMMAVAKIESGFNPNQRT--GSYIGLFQLSQYEFGKFGFGQIRSP 146
           E I++A+  +GL  +++  VA++ESG NPN R    S  GL+Q       ++G      P
Sbjct: 11  EAIRQAAARYGLPESYLYRVAQVESGGNPNARNPRSSAGGLYQFIDSTAKQYGLQDRFDP 70

Query: 147 RDNAVAAAYKVITEGILFEWITHRKPDLSDLYLIHQQGWEGAAEHISQPARIAWKSMCAT 206
              A A     +        +  R P  ++LYL HQQG  GAA  +  P   A + + + 
Sbjct: 71  MQAADAMGRLTLDNRNHLSRVLGRAPTDAELYLAHQQGAGGAARLLQNPHANAAQLVGSN 130

Query: 207 SEGKEKGGRWCK 218
           + G   G    +
Sbjct: 131 AVGLNAGNNAMR 142


>ref|YP_001609470.1| hypothetical protein Btr_1099 [Bartonella tribocorum CIP 105476]
 emb|CAK01475.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 226

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 89  EEIKRASDAFGLDFNFMMAVAKIESGFNPNQRT--GSYIGLFQLSQYEFGKFGFGQIRSP 146
           + I++A+  +GL  +++  VA++ESG NPN R    S  GL+Q       ++G      P
Sbjct: 10  QAIRQAAARYGLPESYLYRVAQVESGGNPNARNPRSSAGGLYQFIDSTAKQYGLQDRFDP 69

Query: 147 RDNAVAAAYKVITEGILFEWITHRKPDLSDLYLIHQQGWEGAAEHISQPARIAWKSMCAT 206
              A A     +        +  R P  ++LYL HQQG  GAA  +  P   A + + + 
Sbjct: 70  MQAADAMGRLTLDNRNHLSRVLGRAPTDAELYLAHQQGAGGAARLLQNPHANAAQLVGSN 129

Query: 207 SEGKEKGGRWCK 218
           + G   G    +
Sbjct: 130 AVGLNAGNNAMR 141


>ref|ZP_07661585.1| lytic transglycosylase [Roseibium sp. TrichSKD4]
 gb|EFO29140.1| lytic transglycosylase [Roseibium sp. TrichSKD4]
          Length = 819

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 84  VGTPAE---EIKRASDAFGLDFNFMMAVAKIESGFNPNQRT--GSYIGLFQLSQYEFGKF 138
           V  P+E    I +A+  +GL  N ++ VA++ES FNP  +    S  GLFQ        +
Sbjct: 82  VNAPSEIRNTIVQAAKKYGLGPNALLKVAQLESSFNPQAKNPNSSAGGLFQFIDGTAKDY 141

Query: 139 GFGQIRSPRDNAVAAAYKVITEGILFEWITHRKPDLSDLYLIHQQGWEGAAEHISQP 195
           G      P + A A A  +         +  R+P   +LYL HQQG  GAA+ +  P
Sbjct: 142 GLKNRYDPVEAADAGARLMRDNRNHLVKVLGREPTAGELYLAHQQGRGGAAKLLGNP 198


>ref|YP_002971815.1| lytic transglycolase [Bartonella grahamii as4aup]
 gb|ACS51132.1| lytic transglycolase [Bartonella grahamii as4aup]
          Length = 221

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 3/134 (2%)

Query: 89  EEIKRASDAFGLDFNFMMAVAKIESGFNPNQRT--GSYIGLFQLSQYEFGKFGFGQIRSP 146
           + I++ +  +GL  +++  VA++ESG NPN R    S  GL+Q       ++G      P
Sbjct: 10  QAIRQTAARYGLPESYLYRVAQVESGGNPNARNPRSSAGGLYQFIDSTAKQYGLQDRFDP 69

Query: 147 RDNAVAAAYKVITEGILFEWITHRKPDLSDLYLIHQQGWEGAAEHISQPARIAWKSMCAT 206
              A A     +        +  R P  ++LYL HQQG  GAA  +  P   A + + + 
Sbjct: 70  MQAADAMGRLTLDNRNHLSRLLGRAPSEAELYLAHQQGAGGAARLLQNPHANAAQIVGSN 129

Query: 207 SEGKEKGGRWCKRA 220
           + G   GG    RA
Sbjct: 130 AVGL-NGGNNAMRA 142