BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0226.0024.p (579 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06369608.1| Methyltransferase type 11 [Desulfovibrio sp. ... 397 e-108 ref|YP_411606.1| hypothetical protein Nmul_A0911 [Nitrosospira m... 386 e-105 ref|YP_003846865.1| Methyltransferase type 11 [Gallionella capsi... 377 e-102 ref|ZP_01451569.1| Tetratricopeptide TPR_4 [Mariprofundus ferroo... 376 e-102 ref|YP_002954485.1| hypothetical protein DMR_31080 [Desulfovibri... 375 e-102 >ref|ZP_06369608.1| Methyltransferase type 11 [Desulfovibrio sp. FW1012B] gb|EFC20283.1| Methyltransferase type 11 [Desulfovibrio sp. FW1012B] Length = 786 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 236/480 (49%), Positives = 292/480 (60%), Gaps = 14/480 (2%) Query: 107 PVVTSYAGRIASKWPLPVTSSELFGSEGVAPLANDLFLRSAMEATTLASMQLEVLLGYAR 166 P VT R A+ WP + LFG +G + + S + AT + ++ LE L AR Sbjct: 309 PAVT----RAAAAWPNRLDREALFGPQGPQAWGREPLVESLLAATPVCTVPLERFLTQAR 364 Query: 167 AELLQLAGEQGQDEVDDEIVAFACALARQCFINEYVYAQTAAESEGAGALRDRLLQDLTS 226 LL A + + + F +LARQC +NEY +A E A ALRD L LT+ Sbjct: 365 TVLLATAEGAAARPPEADALGFYASLARQCHVNEYAFAVAEEEETRARALRDALEAALTA 424 Query: 227 GAAISPLTLAVVAAYFPLHALPAADALLRRDWPATVAGLLRVQLREPRVEMEERSAIAGL 286 I L + VAAYFPLH L AA+ L R WP V LL Q+REP E R GL Sbjct: 425 DRDIPALLVVAVAAYFPLHTLEAAERLPARPWPGPVEALLTQQVREPAEEQGYREDTPGL 484 Query: 287 TPIKNSVSVDVMRQYEENPYPRWT----VNPLTAFAADRARGRTVATADQQAERD---IL 339 T I ++VS V QYEENPYPRW V+ F A R A RD +L Sbjct: 485 TAIVDAVSQRVRLQYEENPYPRWIKAAPVDAPVLFDAYLRRRFPRAVFAPLGARDGLDVL 544 Query: 340 IAGCGTGSHAIQIAQVYPNARLLAVDISMTSLAYARRKTRELGLRNIDYAQADILELGSI 399 +AGCGTG HA++ A+ + AR+LAVD+S+ SL YARRKTRELG+ I+YAQADIL L + Sbjct: 545 VAGCGTGQHALETARRFRGARVLAVDLSLASLGYARRKTRELGVGGIEYAQADILGLSDL 604 Query: 400 GRTFDSIESVGVLHHLAEPLAGWRVLVSLLRPGGTMRIGLYSHLARRVIVEARDRIAARN 459 GR FD IES GVLHHLA+PLAGWRVLVSLLRPGG MR+GLYS +ARR IV AR + AR Sbjct: 605 GRRFDVIESSGVLHHLADPLAGWRVLVSLLRPGGCMRLGLYSDIARRGIVRARAYLFARG 664 Query: 460 YRATTEDIRRCRQDIL-READKWKPLIGAKDFYSMSGCRDLLFNVMEHRLTIPEIAAFLS 518 Y AT E +RRCRQ++L AD I DF+S+SGCRDLLF+V EH T + AFL+ Sbjct: 665 YTATAESMRRCRQELLGLPADDPLRRILLNDFFSISGCRDLLFHVCEHCTTPLGLKAFLA 724 Query: 519 EHGLTFGGFEPFDDPAVLDRFRKQFPGTADETDLDQWHRFELDHPETFWDMYVFMVGKSA 578 E+GLT GF+ D PA L+ +R++FPG TDL WH FE D+P+TF +MY F V K+A Sbjct: 725 ENGLTLLGFD-LDVPA-LEAYRRRFPGDPAATDLSNWHYFEEDNPDTFIEMYQFWVQKTA 782 Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 33/67 (49%) Query: 12 FNEAQQICRQILAREPGHVQGLNLLGLMAQASGDHRAAAKMFTKAIAADDVNAACHYNAG 71 +EA Q LA +P V+ L G +A+G AA + +AIA A HYN G Sbjct: 99 LDEALTCYGQALALDPASVRALTNQGAAFEAAGRPHEAAASYRQAIALSPDQARSHYNLG 158 Query: 72 NSYQALG 78 N+ + LG Sbjct: 159 NALKDLG 165 >ref|YP_411606.1| hypothetical protein Nmul_A0911 [Nitrosospira multiformis ATCC 25196] gb|ABB74214.1| Tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196] Length = 875 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 220/481 (45%), Positives = 291/481 (60%), Gaps = 42/481 (8%) Query: 134 GVAPLANDLFLRSAMEATTLASMQLEVLLGYARAELLQLA-------------GEQGQDE 180 G A + N+ LR+ ME T + ++LE L R LLQ+A G + Q+E Sbjct: 398 GFAAVFNNELLRALMENTPVCDVELEQFLTSLRYCLLQIAIAEENGAGKVRGDGREWQEE 457 Query: 181 VDDEIVAFACALARQCFINEYVYAQTAAESEGAGALRDRLLQDLTSGAAISPLTLAVVAA 240 D F CALARQCFINEYV+A +A E E A L++++ L + I PL+LA AA Sbjct: 458 GD----LFWCALARQCFINEYVFAYSAEEYEQALKLKEQVTAALQANGTIHPLSLAAAAA 513 Query: 241 YFPLHALPAADALLRRDWPATVAGLLRVQLREPRVEMEERSAIAGLTPIKNSVSVDVMRQ 300 YFPL +LP A+ LL WP +A LL Q++EP E S + LT I + S V Q Sbjct: 514 YFPLRSLPFAERLLDHSWPDPIAALLLQQVQEPLKEERNLSHLPSLTAIVDDTSCRVRNQ 573 Query: 301 YEENPYPRWTVNPLTAFA--ADR--------ARGRTVATADQQAER-----DILIAGCGT 345 YEENPYPRW PL + DR AR + A+ + E ++L+AGCGT Sbjct: 574 YEENPYPRWIKVPLRPGSELVDRYLSSRFPYARFESSASRGHRNESVKDAIEVLVAGCGT 633 Query: 346 GSHAIQIAQVYPNARLLAVDISMTSLAYARRKTRELGLRNIDYAQADILELGSI------ 399 G HAI AQ + NA +LAVD+S SL YA+RKT EL +RNI+YAQADIL L S Sbjct: 634 GRHAIAAAQRFKNANVLAVDLSSRSLCYAKRKTDELCVRNIEYAQADILNLDSESIAARG 693 Query: 400 GRTFDSIESVGVLHHLAEPLAGWRVLVSLLRPGGTMRIGLYSHLARRVIVEARDRIAARN 459 + FD IE+VGVLHHL++PL GWR L+SLLRPGG MRIGLYS AR + A+ IA R Sbjct: 694 SKLFDVIEAVGVLHHLSDPLLGWRKLLSLLRPGGFMRIGLYSEYARSHLAFAQRFIAQRG 753 Query: 460 YRATTEDIRRCRQDIL--READKWKPLIGAKDFYSMSGCRDLLFNVMEHRLTIPEIAAFL 517 Y+ EDIR CRQ+++ D ++ ++ A+DFY++S CRD+LF+V EHR T+P I L Sbjct: 754 YKPIAEDIRTCRQEMMSPENGDTFRQVLSARDFYTLSECRDMLFHVQEHRYTLPHIKEDL 813 Query: 518 SEHGLTFGGFEPFDDPAVLDRFRKQFPGTADETDLDQWHRFELDHPETFWDMYVFMVGKS 577 E GL F GF + ++++R++FP +TDLD+WH FE ++P+TF MY+F V K Sbjct: 814 RELGLIFLGFSI--GQSTVNQYRRRFPEDVPQTDLDRWHIFETENPDTFNTMYLFWVQKE 871 Query: 578 A 578 A Sbjct: 872 A 872 >ref|YP_003846865.1| Methyltransferase type 11 [Gallionella capsiferriformans ES-2] gb|ADL55101.1| Methyltransferase type 11 [Gallionella capsiferriformans ES-2] Length = 949 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 198/459 (43%), Positives = 280/459 (61%), Gaps = 22/459 (4%) Query: 132 SEGVAPLANDLFLRSAMEATTLASMQLEVLLGYARAELLQLAGEQGQDEVDDEIVAFACA 191 SE +A L D L + + + + LE L+ R +LL A E DD + F A Sbjct: 496 SEDLAALEKDSLLTALLCSAPICDTDLERLMTLVRRDLLTAAVEMTTPSSDDTL-RFYSA 554 Query: 192 LARQCFINEYVYAQTAAESEGAGALRDRLLQDLTSGAAISPLTLAVVAAYFPLHALPAAD 251 LARQCFINEYV++ + AE + A LR L + L L + VAAYFPLH + Sbjct: 555 LARQCFINEYVFSYSDAEIQTAQRLRASLAESLKENIPTDALCILAVAAYFPLHTIDGNS 614 Query: 252 ALLRRDWPATVAGLLRVQLREPRVEMEERSAIAGLTPIKNSVSVDVMRQYEENPYPRWTV 311 LL R WP V +L Q++EP+VE++ R+ +A L I+N+VS+ V QYEENPYPRW Sbjct: 615 QLLNRCWPVEVCAVLIQQIQEPKVELQLRNTLAKLGRIENTVSLQVQNQYEENPYPRWIK 674 Query: 312 NP------------LTAFAADRARGRTVATADQQAERDILIAGCGTGSHAIQIAQVYPNA 359 P L F + +AD+ ILIAGCGTG H+I +AQ +A Sbjct: 675 VPPPGDEKNIKQAILQKFPQTHFSRQKANSADR-----ILIAGCGTGQHSISLAQRTRDA 729 Query: 360 RLLAVDISMTSLAYARRKTRELGLRNIDYAQADILELGSIGRTFDSIESVGVLHHLAEPL 419 ++LA+D+S +SLAYA+RKT ELG+ +I+YAQAD+LE+ R F+ I+S GVLHH+ +P Sbjct: 730 QILAIDLSTSSLAYAKRKTLELGISSIEYAQADLLEIAHDKRRFEMIQSSGVLHHMKDPW 789 Query: 420 AGWRVLVSLLRPGGTMRIGLYSHLARRVIVEARDRIAARNYRATTEDIRRCRQDI--LRE 477 AGW+ L+++L+PGG M++GLYS LAR +V RD IA + Y +T ++IRRCRQ++ + E Sbjct: 790 AGWQALLTVLKPGGFMKLGLYSELARTDVVRIRDFIAQQGYGSTADEIRRCRQELININE 849 Query: 478 ADKWKPLIGAKDFYSMSGCRDLLFNVMEHRLTIPEIAAFLSEHGLTFGGFEPFDDPAVLD 537 + + ++ + DFYS+S CRDLLF+V EHR+T+ I AF+ + L F GFE D VL Sbjct: 850 QENFGAILNSPDFYSISACRDLLFHVQEHRMTLSGIGAFIRSNKLKFLGFEI--DSEVLR 907 Query: 538 RFRKQFPGTADETDLDQWHRFELDHPETFWDMYVFMVGK 576 ++++FP + L+QWH FE ++P F MY F + K Sbjct: 908 AYKQRFPNDPEAIHLEQWHIFETENPHIFASMYQFWIQK 946 >ref|ZP_01451569.1| Tetratricopeptide TPR_4 [Mariprofundus ferrooxydans PV-1] gb|EAU55752.1| Tetratricopeptide TPR_4 [Mariprofundus ferrooxydans PV-1] Length = 689 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 198/461 (42%), Positives = 286/461 (62%), Gaps = 15/461 (3%) Query: 127 SELFGSEGVAPLANDLFLRSAMEATTLASMQLEVLLGYARAELLQLAGEQGQDEVDDEIV 186 ++L +A + ND ++ + + + LE L AR LL A + + Sbjct: 231 NQLCEGNTLAEIGNDPLYKALLRSVPVYDENLEQWLTDARQMLLN-AANATTNPLQTSWF 289 Query: 187 AFACALARQCFINEYVYAQTAAESEGAGALRDRLLQDL-TSGAAISPLTLAVVAAYFPLH 245 +F LA QCFIN+Y++ +A E + A AL+D L+ L +SPL L VA+YFPL+ Sbjct: 290 SFFGPLAEQCFINDYLFYCSADEIQTASALKDALITTLEKEPEEVSPLRLIAVASYFPLY 349 Query: 246 ALPAADALLRRDWPATVAGLLRVQLREPRVEMEERSAIAGLTPIKNSVSVDVMRQYEENP 305 ++ + LL R WP + LL Q++EPR E+ R +I LTP++N VS+ V QYEE+P Sbjct: 350 SIAGSHKLLERQWPDAIQRLLIQQIKEPREEIALRPSITSLTPVENEVSLAVQAQYEESP 409 Query: 306 YPRWTVNP-------LTAFAADRARGRTVATADQQAERDILIAGCGTGSHAIQIAQVYPN 358 YPRW P + + G + + + D+L+AGCGTG H I+ A++ N Sbjct: 410 YPRWVKLPAAIEPVAINTYLHSLFPGVVIEPIENMMQPDLLVAGCGTGQHPIETARLIRN 469 Query: 359 ARLLAVDISMTSLAYARRKTRELGLRNIDYAQADILELGSIGRTFDSIESVGVLHHLAEP 418 A +LAVD+S+ SL+YA RK RE+G++NI++A+ADIL+LGS+ RTFD IESVGVLHHL P Sbjct: 470 ASVLAVDLSLASLSYAERKAREMGIQNIEFARADILKLGSLDRTFDIIESVGVLHHLDRP 529 Query: 419 LAGWRVLVSLLRPGGTMRIGLYSHLARRVIVEARDRIAARNYRATTEDIRRCRQDILREA 478 GW+VLVS+LRP G MR+G YS +ARR +V+AR+ IA RN+ AT + IR+ R LRE Sbjct: 530 EEGWKVLVSMLRPNGVMRLGFYSEVARRHVVKARELIAQRNFAATADGIRKAR-PYLREV 588 Query: 479 DKWKPL---IGAKDFYSMSGCRDLLFNVMEHRLTIPEIAAFLSEHGLTFGGFEPFDDPAV 535 D+ + L + + DFYS+S CRDLLF+V EHRLT+ +I F+ E+GLTF GF +P Sbjct: 589 DRNQTLGCAVRSTDFYSLSACRDLLFHVQEHRLTLAQIQQFIDENGLTFLGFT--AEPMT 646 Query: 536 LDRFRKQFPGTADETDLDQWHRFELDHPETFWDMYVFMVGK 576 + + +FP T+L+ W +E ++P+ F+DMY F + K Sbjct: 647 IRAYHTRFPDDPTATNLENWAIYEQENPDAFFDMYQFWLQK 687 >ref|YP_002954485.1| hypothetical protein DMR_31080 [Desulfovibrio magneticus RS-1] dbj|BAH76599.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 785 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 220/486 (45%), Positives = 281/486 (57%), Gaps = 19/486 (3%) Query: 107 PVVTSYAGRIASKWPLPVTSSELFGSEGVAPLANDLFLRSAMEATTLASMQLEVLLGYAR 166 PV+ R + WP +T +L+G +A D LR+ ++A +S LE L AR Sbjct: 303 PVIAGCLERALAAWPGRLTPQDLYGPARPGAVAGDTLLRAWLDAGPASSPALERFLTLAR 362 Query: 167 AELL-QLAGEQGQ----DEVDDEIVAFACALARQCFINEYVYAQTAAESEGAGALRDRLL 221 + LL Q A ++ D+ + AF ALARQC +NEYV+ +A E LRD L Sbjct: 363 SCLLAQAAADEPHVRDVTPADERVTAFHAALARQCRVNEYVFHVSAEEEVAVAVLRDCLA 422 Query: 222 QDLTSGAAISPLTLAVVAAYFPLHALPAADALLRRDWPATVAGLLRVQLREPRVEMEERS 281 L I+P + AAY PL A+P LL R WP V +L QL EP E E R Sbjct: 423 DALAGCGLIAPSWVLAAAAYGPLRAVPGHAGLLDRPWPEAVGRVLTQQLVEPAAEQELRG 482 Query: 282 AIAGLTPIKNSVSVDVMRQYEENPYPRWTVN-----PLTAFAADRAR--GRTVATADQQA 334 I LTPI++ VS V RQYEENPYPRW + P+T A R R +A Sbjct: 483 RIPALTPIEDDVSRLVRRQYEENPYPRWVLPAPAEAPVTLAANLRERFPQADLAGVPDGP 542 Query: 335 ERDILIAGCGTGSHAIQIAQVYPNARLLAVDISMTSLAYARRKTRELGLRNIDYAQADIL 394 D+L+AGCGTG H+++ A+ Y AR+LAVD+S+TSL YARRK E G+ NI+YAQAD+L Sbjct: 543 FLDVLVAGCGTGQHSLETARAYLGARVLAVDLSLTSLCYARRKALEQGVGNIEYAQADLL 602 Query: 395 ELGSIGRTFDSIESVGVLHHLAEPLAGWRVLVSLLRPGGTMRIGLYSHLARRVIVEARDR 454 LG +GR FD +ES GVLHHLA+P GWR LV L+RPGG MRIGLYS LARR I + R Sbjct: 603 RLGGLGRDFDLVESSGVLHHLADPAGGWRTLVPLVRPGGVMRIGLYSRLARRGITKVRQM 662 Query: 455 IAARNYRATTEDIRRCRQDILREADKWKPLIG---AKDFYSMSGCRDLLFNVMEHRLTIP 511 IA R AT E IR RQ++L W+P G DF+S SGCRDLLF+V EH L + Sbjct: 663 IADRGLSATPETIRAFRQELLDM--PWEPSWGRFLLGDFFSASGCRDLLFHVQEHCLDLL 720 Query: 512 EIAAFLSEHGLTFGGFEPFDDPAVLDRFRKQFPGTADETDLDQWHRFELDHPETFWDMYV 571 EI F E+GL G E +P V+ + +FP +L WH FE D+P+TF +MY Sbjct: 721 EIKTFCLENGLRVIGLE--AEPEVVAAYHSRFPDDPAAVNLSNWHAFEADNPDTFLNMYQ 778 Query: 572 FMVGKS 577 F V ++ Sbjct: 779 FWVQRT 784