BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0226.0021.p (267 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_766050.1| lyase [Rhizobium leguminosarum bv. viciae 3841]... 219 3e-55 ref|YP_002973934.1| carboxyphosphonoenolpyruvate phosphonomutase... 218 1e-54 ref|YP_002279596.1| PEP phosphonomutase [Rhizobium leguminosarum... 207 2e-51 ref|ZP_03508905.1| putative PEP phosphonomutase protein [Rhizobi... 206 3e-51 ref|YP_001325769.1| hypothetical protein Smed_0074 [Sinorhizobiu... 204 8e-51 >ref|YP_766050.1| lyase [Rhizobium leguminosarum bv. viciae 3841] emb|CAK05934.1| putative lyase [Rhizobium leguminosarum bv. viciae 3841] Length = 256 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 120/252 (47%), Positives = 161/252 (63%), Gaps = 4/252 (1%) Query: 5 TQQQYAEAFHTLHRTGDPLVLFNAWDVATAKAIAKS-SRAIATSSGAVAAALGYADGENA 63 Q + A+AF LHR GDP+VL+N WD TAKA+ + ++A+AT S +VAAA GYADGE Sbjct: 2 NQSEKAKAFGALHRKGDPVVLYNIWDAGTAKAVGDAGAKALATGSWSVAAAHGYADGEKL 61 Query: 64 PLEMVEGLVSRMTASVSIPVSIDLEAGYGDTPDAAAHSAARILKAGAIGINIEDGLVGGK 123 P+ ++ +TA+V +P+S+D E Y P+ AA + A++++ GAIGIN ED +VGG Sbjct: 62 PMSVLVETAKSITAAVDLPLSVDFEGAYSTEPEGAAANVAKLVEVGAIGINFEDQVVGGG 121 Query: 124 RQLATPEQHAAKIRAVRDAAQQLGIDLFINARTDPFLLKFGSPEQC--LTEAARRAKVYA 181 L E+ AA+IRA+R A+ GI FINARTD FL + + + EA R K YA Sbjct: 122 -GLYPAERQAARIRAIRAMAEGKGIPFFINARTDLFLAESDLSKHAGLVDEAIERGKAYA 180 Query: 182 EAGADGIFVPGLTDLALIERFVQLTPLPVNIMVTQGVPEIGELARAGVRRVSLGPWPMMA 241 AG G FVPGL D ALIE+ +PLPVNIM+ G P++ LA+ GV RVS GP P + Sbjct: 181 AAGGSGFFVPGLIDPALIEKVCAASPLPVNIMMRTGAPDVKALAKLGVGRVSYGPGPYRS 240 Query: 242 AMRVIGQAAAAV 253 M + Q AAA+ Sbjct: 241 MMEKLKQEAAAI 252 >ref|YP_002973934.1| carboxyphosphonoenolpyruvate phosphonomutase protein [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS54395.1| putative carboxyphosphonoenolpyruvate phosphonomutase protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 256 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 119/252 (47%), Positives = 161/252 (63%), Gaps = 4/252 (1%) Query: 5 TQQQYAEAFHTLHRTGDPLVLFNAWDVATAKAIAKS-SRAIATSSGAVAAALGYADGENA 63 Q + A+AF LHR GDP+VL+N WD TAKA+ + ++A+AT S +VAAA GYADGE Sbjct: 2 NQSEKAKAFGALHRKGDPVVLYNIWDAGTAKAVTDAGAKALATGSWSVAAAHGYADGEKL 61 Query: 64 PLEMVEGLVSRMTASVSIPVSIDLEAGYGDTPDAAAHSAARILKAGAIGINIEDGLVGGK 123 P+ ++ +TA V++P+S+D E Y P+ AA + A++++ GAIGIN ED +VGG Sbjct: 62 PMSVLVETAKSITAVVNLPLSVDFEGAYSAEPEGAAANVAKLVEVGAIGINFEDQVVGGG 121 Query: 124 RQLATPEQHAAKIRAVRDAAQQLGIDLFINARTDPFLLKFGSPEQC--LTEAARRAKVYA 181 L E+ AA+IRA+R A+ GI FINARTD FL + + + EA R K YA Sbjct: 122 -GLYPAERQAARIRAIRAMAEGEGIPFFINARTDLFLAESDLSKHAGLVEEAIERGKAYA 180 Query: 182 EAGADGIFVPGLTDLALIERFVQLTPLPVNIMVTQGVPEIGELARAGVRRVSLGPWPMMA 241 AG G FVPGL D ALIE+ +PLPVNIM+ G P++ LA+ GV R+S GP P + Sbjct: 181 AAGGSGFFVPGLIDPALIEKICAASPLPVNIMMRTGAPDVKTLAKLGVGRISYGPGPYRS 240 Query: 242 AMRVIGQAAAAV 253 M + Q AAA+ Sbjct: 241 MMEKLKQEAAAI 252 >ref|YP_002279596.1| PEP phosphonomutase [Rhizobium leguminosarum bv. trifolii WSM2304] gb|ACI53370.1| putative PEP phosphonomutase protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 256 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 113/252 (44%), Positives = 157/252 (62%), Gaps = 4/252 (1%) Query: 5 TQQQYAEAFHTLHRTGDPLVLFNAWDVATAKAIAKS-SRAIATSSGAVAAALGYADGENA 63 Q + A+AFH LH+ GDP+VL+N WD TAKA+A + ++A+AT S +VAAA G+ADGE Sbjct: 2 NQTEKAKAFHALHKKGDPIVLYNIWDAGTAKAVADAGAKALATGSWSVAAAHGFADGEKL 61 Query: 64 PLEMVEGLVSRMTASVSIPVSIDLEAGYGDTPDAAAHSAARILKAGAIGINIEDGLVGGK 123 P+ ++ + +T + +P+S+D E Y P+ AA + AR+++ GAIGIN ED + G+ Sbjct: 62 PMPVLVEMAKSITDVIDLPLSVDFEGAYSTEPEGAAANVARLVEIGAIGINFEDRVDAGE 121 Query: 124 RQLATPEQHAAKIRAVRDAAQQLGIDLFINARTDPFLLK--FGSPEQCLTEAARRAKVYA 181 L E AA+IRA+R A I FINARTD FL + + EA R + YA Sbjct: 122 -GLYPVESQAARIRAIRAMADGKDIPFFINARTDLFLAEGDLAKHAGLVDEAIERGRAYA 180 Query: 182 EAGADGIFVPGLTDLALIERFVQLTPLPVNIMVTQGVPEIGELARAGVRRVSLGPWPMMA 241 AG +G FVPGL D ALIE+ + LPVNIM+ G P++ LA+ GV R+S GP P + Sbjct: 181 AAGGNGFFVPGLIDPALIEKICAASSLPVNIMMRAGAPDVKTLAKLGVGRISYGPGPYRS 240 Query: 242 AMRVIGQAAAAV 253 M + Q AAA+ Sbjct: 241 MMEKLKQEAAAI 252 >ref|ZP_03508905.1| putative PEP phosphonomutase protein [Rhizobium etli Brasil 5] Length = 256 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 113/252 (44%), Positives = 157/252 (62%), Gaps = 4/252 (1%) Query: 5 TQQQYAEAFHTLHRTGDPLVLFNAWDVATAKAIAKS-SRAIATSSGAVAAALGYADGENA 63 Q + A AFH LH+ G+P+VL+N WD TAKA+A++ +RA+AT S +VAAA G+ADGE Sbjct: 2 NQTEKARAFHALHQKGNPIVLYNIWDAGTAKAVAEAGARALATGSWSVAAAHGFADGEKL 61 Query: 64 PLEMVEGLVSRMTASVSIPVSIDLEAGYGDTPDAAAHSAARILKAGAIGINIEDGLVGGK 123 P+ ++ +T V +P+S+D E Y P+ AA + AR+++ GA+GIN ED +V G+ Sbjct: 62 PMSVLVETAKSITDFVDLPLSVDFEGAYSAEPERAAANVARLVEVGAVGINFEDRVVAGE 121 Query: 124 RQLATPEQHAAKIRAVRDAAQQLGIDLFINARTDPFLLKFGSPEQCL--TEAARRAKVYA 181 L E AA+IRA+R A + FINARTD FL + + + EA R + YA Sbjct: 122 -GLYALESQAARIRAIRAMADGRDMPFFINARTDLFLAESDLAKHAVLVDEAIERGRAYA 180 Query: 182 EAGADGIFVPGLTDLALIERFVQLTPLPVNIMVTQGVPEIGELARAGVRRVSLGPWPMMA 241 AG +G FVPGL D LIE+ + LPVNIM+ G P++ LAR GV R+S GP P + Sbjct: 181 AAGGNGFFVPGLVDPGLIEKICAASSLPVNIMMRAGAPDVKTLARLGVGRISYGPGPYRS 240 Query: 242 AMRVIGQAAAAV 253 M + Q AAA+ Sbjct: 241 MMEKLKQEAAAI 252 >ref|YP_001325769.1| hypothetical protein Smed_0074 [Sinorhizobium medicae WSM419] gb|ABR58934.1| conserved hypothetical protein [Sinorhizobium medicae WSM419] Length = 258 Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 111/247 (44%), Positives = 162/247 (65%), Gaps = 9/247 (3%) Query: 5 TQQQYAEAFHTLHRTGDPLVLFNAWDVATAKAIAKS-SRAIATSSGAVAAALGYADGENA 63 +Q++ A AF LHR GDP++L+N WD +A+ +A++ ++A+AT S +VAAA GY DG+ Sbjct: 2 SQEENALAFEALHRKGDPVILYNIWDAGSARCVAEAGAKALATGSWSVAAAHGYTDGQKL 61 Query: 64 PLEMVEGLVSRMTASVSIPVSIDLEAGYGDTPDAAAHSAARILKAGAIGINIEDGLVGGK 123 PL ++ V + A+ +P+S+D E Y + P AA + A+I+ AG IGIN ED ++G K Sbjct: 62 PLPLLLETVREIVAATGLPLSVDFEGAYSEDPAQAAANVAQIMDAGCIGINFEDQVIG-K 120 Query: 124 RQLATPEQHAAKIRAVRDAAQQLGIDLFINARTDPFLLKFGSPEQ---CLTEAARRAKVY 180 + + AA++RA+R+ A++ G+ LFINARTD FL + G E+ + +A RA+ Y Sbjct: 121 GGVHPIDGQAARVRAIREMAERRGVRLFINARTDLFLQE-GDAERHTALMEDAIARAEAY 179 Query: 181 AEAGADGIFVPGLTDLALIERFVQLTPLPVNIMVTQGVPEIGELARAGVRRVSLGPWP-- 238 A+AGA G F PGL D LI R +PLPVN+M+ G P+I L+ AGV RVS GP+P Sbjct: 180 ADAGASGFFAPGLADETLIARLCAASPLPVNVMMKPGAPDIARLSAAGVGRVSYGPFPYR 239 Query: 239 -MMAAMR 244 MMA +R Sbjct: 240 GMMAWLR 246