BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0226.0017.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001203572.1| putative sulfopyruvate decarboxylase subunit... 228 9e-58 ref|YP_001242468.1| putative sulfopyruvate decarboxylase subunit... 196 3e-48 ref|YP_002501851.1| thiamine pyrophosphate protein domain-contai... 194 2e-47 ref|YP_001766658.1| thiamine pyrophosphate binding domain-contai... 186 3e-45 ref|ZP_03697147.1| thiamine pyrophosphate protein domain protein... 178 1e-42 >ref|YP_001203572.1| putative sulfopyruvate decarboxylase subunit beta [Bradyrhizobium sp. ORS 278] emb|CAL75335.1| Putative sulfopyruvate decarboxylase beta subunit [Bradyrhizobium sp. ORS 278] Length = 199 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 128/197 (64%), Positives = 143/197 (72%), Gaps = 17/197 (8%) Query: 7 TLDRRAAVKALLADRGELLVISGLGSSSYDLFDAGEHPGNFYLWGAMGGAAMVGLGLALA 66 TLDRR AVKALL DRG+LLVISGLGSSSYD+F AG+H NFYLWGAMGGAAM+GLGLALA Sbjct: 10 TLDRRIAVKALLQDRGDLLVISGLGSSSYDVFAAGDHDANFYLWGAMGGAAMIGLGLALA 69 Query: 67 QPKRPVLVITGDGEQLMGIGSLLTIATKQPGNLSIAVLDNGHFGETGMQPSHSGLGARLE 126 QP RPV VITGDGEQLMG+GSL T A KQP NLSI VLDN HFGETGMQ SHSGLGARLE Sbjct: 70 QPSRPVAVITGDGEQLMGLGSLATAAAKQPRNLSIVVLDNAHFGETGMQMSHSGLGARLE 129 Query: 127 VIADGAGIGNVSEIADMAGIESFRNSLRDHRRRPEAGAHPHRRRRSRA-----RAAAARR 181 +IA GAG +V+ I D A + +FR LRD A PH R + A RA AR Sbjct: 130 LIAGGAGFPSVTTIEDAAALAAFRPKLRDL-------AGPHFARVAIATDHVDRALPARD 182 Query: 182 HLFEEPLPRPSRLQGQL 198 +F + +R +G L Sbjct: 183 GVFLK-----NRFRGHL 194 >ref|YP_001242468.1| putative sulfopyruvate decarboxylase subunit beta [Bradyrhizobium sp. BTAi1] gb|ABQ38562.1| Putative sulfopyruvate decarboxylase beta subunit [Bradyrhizobium sp. BTAi1] Length = 193 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 114/148 (77%), Positives = 126/148 (85%) Query: 8 LDRRAAVKALLADRGELLVISGLGSSSYDLFDAGEHPGNFYLWGAMGGAAMVGLGLALAQ 67 LDRRAAV+ALL DRG+LLVISGLGSSSYD+F AG+HP NFYLWGAMGGAAM+GLGLALAQ Sbjct: 5 LDRRAAVQALLQDRGDLLVISGLGSSSYDVFAAGDHPANFYLWGAMGGAAMMGLGLALAQ 64 Query: 68 PKRPVLVITGDGEQLMGIGSLLTIATKQPGNLSIAVLDNGHFGETGMQPSHSGLGARLEV 127 P RPV VITGDGEQLMG+G L T A K+P NLSI VLDN HFGETGMQ SHSGLGARLE+ Sbjct: 65 PSRPVAVITGDGEQLMGLGGLATAAAKKPSNLSIIVLDNAHFGETGMQMSHSGLGARLEL 124 Query: 128 IADGAGIGNVSEIADMAGIESFRNSLRD 155 IA GAG +VS IAD +++FR LRD Sbjct: 125 IASGAGFPSVSTIADQVALDAFRPKLRD 152 >ref|YP_002501851.1| thiamine pyrophosphate protein domain-containing protein [Methylobacterium nodulans ORS 2060] gb|ACL61548.1| thiamine pyrophosphate protein domain protein TPP-binding [Methylobacterium nodulans ORS 2060] Length = 198 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 94/147 (63%), Positives = 113/147 (76%) Query: 8 LDRRAAVKALLADRGELLVISGLGSSSYDLFDAGEHPGNFYLWGAMGGAAMVGLGLALAQ 67 LDRR V LLADR +LLV++GLGS+SYD+ AG+H GN+YLW AMG AAMVGLGL A+ Sbjct: 10 LDRRDVVARLLADRTDLLVVTGLGSASYDVMAAGDHDGNYYLWAAMGSAAMVGLGLTTAK 69 Query: 68 PKRPVLVITGDGEQLMGIGSLLTIATKQPGNLSIAVLDNGHFGETGMQPSHSGLGARLEV 127 P RPVLV+TGDGE LMG GSL TIA ++P NL+IAVLDNGHFGETGMQ SH+G G L+ Sbjct: 70 PDRPVLVVTGDGEMLMGFGSLATIAVRKPANLTIAVLDNGHFGETGMQQSHAGRGIGLDR 129 Query: 128 IADGAGIGNVSEIADMAGIESFRNSLR 154 +A G +E+ DMAGI++ R LR Sbjct: 130 VAAACGFPWTAEVTDMAGIDALRTRLR 156 >ref|YP_001766658.1| thiamine pyrophosphate binding domain-containing protein [Methylobacterium radiotolerans JCM 2831] gb|ACB27856.1| thiamine pyrophosphate protein domain protein TPP-binding [Methylobacterium radiotolerans JCM 2831] Length = 198 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 93/146 (63%), Positives = 113/146 (77%) Query: 6 GTLDRRAAVKALLADRGELLVISGLGSSSYDLFDAGEHPGNFYLWGAMGGAAMVGLGLAL 65 G L+RR AV LLA R +LLVI+GLGS SYD+ AG+HPGN+YLW AMG AA VGLGLA+ Sbjct: 8 GPLERREAVARLLAGRDDLLVITGLGSPSYDVMAAGDHPGNYYLWAAMGSAATVGLGLAV 67 Query: 66 AQPKRPVLVITGDGEQLMGIGSLLTIATKQPGNLSIAVLDNGHFGETGMQPSHSGLGARL 125 AQP RPVLVITGDGE LMG+G L TIA ++P NL++AVLDNGH+GETGMQ SH+G G L Sbjct: 68 AQPARPVLVITGDGEMLMGLGGLATIALQRPPNLTVAVLDNGHYGETGMQASHAGRGLAL 127 Query: 126 EVIADGAGIGNVSEIADMAGIESFRN 151 E +A+ G IAD AG+++ R+ Sbjct: 128 EGVAEACGFPWSRAIADSAGLDTLRD 153 >ref|ZP_03697147.1| thiamine pyrophosphate protein domain protein TPP-binding [Lutiella nitroferrum 2002] gb|EEG09633.1| thiamine pyrophosphate protein domain protein TPP-binding [Lutiella nitroferrum 2002] Length = 196 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 86/144 (59%), Positives = 105/144 (72%) Query: 1 MSASTGTLDRRAAVKALLADRGELLVISGLGSSSYDLFDAGEHPGNFYLWGAMGGAAMVG 60 MS T+DRR V L+A + L+++GLGS+SYD+F AG+ P NFYLWGAMGG+ + Sbjct: 1 MSLREHTIDRREFVAKLIAQLPDALIVTGLGSASYDVFAAGDRPENFYLWGAMGGSTSLA 60 Query: 61 LGLALAQPKRPVLVITGDGEQLMGIGSLLTIATKQPGNLSIAVLDNGHFGETGMQPSHSG 120 LGLALAQP + V+VITGDGEQLMGIGSL T+ KQP NL+I VLDNGHFGETGMQ SHS Sbjct: 61 LGLALAQPDKSVVVITGDGEQLMGIGSLATVGAKQPANLTIVVLDNGHFGETGMQQSHSS 120 Query: 121 LGARLEVIADGAGIGNVSEIADMA 144 LG L +A G I + + D+A Sbjct: 121 LGTDLVAVAKGCSIEDAFHVGDVA 144