BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0226.0014.p (389 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773885.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicu... 757 0.0 ref|YP_001242469.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. B... 743 0.0 ref|YP_001203571.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. O... 739 0.0 ref|YP_004110203.1| acyl-CoA dehydrogenase domain-containing pro... 727 0.0 ref|NP_946958.1| putative acyl-CoA dehydrogenase [Rhodopseudomon... 726 0.0 >ref|NP_773885.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC52510.1| blr7245 [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/388 (93%), Positives = 376/388 (96%), Gaps = 1/388 (0%) Query: 3 AHDQNIDDHSDIRDAVAKLCAQFPGEYWRKLDRQMAYPKEFVDALTEAGYLSVLIPEEYG 62 + + + +DH+DIR+AVAKLCAQFPGEYWRKLDR+MAYPK FVDALTEAGYLSVLIPEEYG Sbjct: 2 SEEHHSEDHADIREAVAKLCAQFPGEYWRKLDREMAYPKAFVDALTEAGYLSVLIPEEYG 61 Query: 63 GAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHGNDAQKAKYLPKVATGELRLQ 122 GAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHGN QKAKYLPK+A+GELRLQ Sbjct: 62 GAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHGNAEQKAKYLPKIASGELRLQ 121 Query: 123 AFGVTEPTSGTDTSSLKTFARREG-DHYVVNGQKIWTSRAEYSDLMVLLARTTPKEQSKK 181 AFGVTEPTSGTDTSSLKTFAR+EG D Y+VNGQKIWTSRAE+SDLMVLLARTTPKEQ KK Sbjct: 122 AFGVTEPTSGTDTSSLKTFARKEGNDSYIVNGQKIWTSRAEHSDLMVLLARTTPKEQVKK 181 Query: 182 RTDGLSVFIVDMREVKGKGLEIRPIRTMMNHATTEVFFTDMKVPAENLIGEEGKGFRYIL 241 RTDGLSVFIVDMRE K GLEIRPIRTMMNHATTEVFFTDMKVPAENLIGEEGKGFRYIL Sbjct: 182 RTDGLSVFIVDMREAKNNGLEIRPIRTMMNHATTEVFFTDMKVPAENLIGEEGKGFRYIL 241 Query: 242 SGMNAERILIAAECVGDAKWFIAKATSYAKERSVFGRPIGQNQGIQFPIAKAYASMRAAE 301 SGMNAERILIAAECVGDAKWFIAKAT+YAKERSVFGRPIGQNQGIQFPIAKAYASMRAAE Sbjct: 242 SGMNAERILIAAECVGDAKWFIAKATNYAKERSVFGRPIGQNQGIQFPIAKAYASMRAAE 301 Query: 302 LMVKEATRKYEAGLDCGAEANMAKMLAADASWEAANACVQTHGGFGFAEEYDVERKFRET 361 LMVKEATRKYEAGLDCGAEANMAKMLAADASWEAANAC+QTHGGFGFAEEYDVERKFRET Sbjct: 302 LMVKEATRKYEAGLDCGAEANMAKMLAADASWEAANACIQTHGGFGFAEEYDVERKFRET 361 Query: 362 RLYQVAPISTNLILSYVAEHVLGMPRSY 389 RLYQVAPISTNL+LSYVAEHVLGMPRSY Sbjct: 362 RLYQVAPISTNLVLSYVAEHVLGMPRSY 389 >ref|YP_001242469.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ38563.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 388 Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/389 (91%), Positives = 374/389 (96%), Gaps = 1/389 (0%) Query: 1 MTAHDQNIDDHSDIRDAVAKLCAQFPGEYWRKLDRQMAYPKEFVDALTEAGYLSVLIPEE 60 MT Q+ DD++DIRDAVAKLCAQFPGEYWRKLDR+MAYP FVDALT+AGYLSVLIPEE Sbjct: 1 MTEQHQH-DDYADIRDAVAKLCAQFPGEYWRKLDREMAYPSAFVDALTQAGYLSVLIPEE 59 Query: 61 YGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHGNDAQKAKYLPKVATGELR 120 YGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHG+ QKAK+LPKVA+GELR Sbjct: 60 YGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHGSAEQKAKWLPKVASGELR 119 Query: 121 LQAFGVTEPTSGTDTSSLKTFARREGDHYVVNGQKIWTSRAEYSDLMVLLARTTPKEQSK 180 LQAFGVTEPTSGTDTSSLKTFA+R+GD Y+VNGQKIWTSRAEYSDLM+LLARTTPK+Q++ Sbjct: 120 LQAFGVTEPTSGTDTSSLKTFAKRDGDSYIVNGQKIWTSRAEYSDLMILLARTTPKDQAQ 179 Query: 181 KRTDGLSVFIVDMREVKGKGLEIRPIRTMMNHATTEVFFTDMKVPAENLIGEEGKGFRYI 240 KRTDGLSVFIVDMRE K GL IRPIRTMMNHATTEVFFTDM+VPAENLIGEEGKGFRYI Sbjct: 180 KRTDGLSVFIVDMREAKKAGLTIRPIRTMMNHATTEVFFTDMRVPAENLIGEEGKGFRYI 239 Query: 241 LSGMNAERILIAAECVGDAKWFIAKATSYAKERSVFGRPIGQNQGIQFPIAKAYASMRAA 300 LSGMNAERILIAAECVGDAKWFIAKAT+YAKER VFGRPIGQNQGIQFPIAKAYASMRAA Sbjct: 240 LSGMNAERILIAAECVGDAKWFIAKATNYAKERVVFGRPIGQNQGIQFPIAKAYASMRAA 299 Query: 301 ELMVKEATRKYEAGLDCGAEANMAKMLAADASWEAANACVQTHGGFGFAEEYDVERKFRE 360 ELMVKEATRKYEAG DCGAEANMAKMLAADAS+EAANAC+QTHGGFGFAEEYDVERKFRE Sbjct: 300 ELMVKEATRKYEAGQDCGAEANMAKMLAADASFEAANACIQTHGGFGFAEEYDVERKFRE 359 Query: 361 TRLYQVAPISTNLILSYVAEHVLGMPRSY 389 TRLYQVAPISTNLILSYVAEHVLGMPRSY Sbjct: 360 TRLYQVAPISTNLILSYVAEHVLGMPRSY 388 >ref|YP_001203571.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL75334.1| acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] Length = 388 Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/389 (90%), Positives = 373/389 (95%), Gaps = 1/389 (0%) Query: 1 MTAHDQNIDDHSDIRDAVAKLCAQFPGEYWRKLDRQMAYPKEFVDALTEAGYLSVLIPEE 60 MT Q+ DD++DIRDAVAKLCAQFPGEYWRKLDR+MAYP FVDALT+AGYLSVLIPEE Sbjct: 1 MTDQHQH-DDYADIRDAVAKLCAQFPGEYWRKLDREMAYPSAFVDALTQAGYLSVLIPEE 59 Query: 61 YGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHGNDAQKAKYLPKVATGELR 120 YGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHG+ QKAK+LPKVA+GELR Sbjct: 60 YGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHGSAEQKAKWLPKVASGELR 119 Query: 121 LQAFGVTEPTSGTDTSSLKTFARREGDHYVVNGQKIWTSRAEYSDLMVLLARTTPKEQSK 180 LQAFGVTEPTSGTDT+SLKT A+R+GD YVVNGQKIWTSRAEYSDLM+LLARTTPK+Q + Sbjct: 120 LQAFGVTEPTSGTDTTSLKTVAKRDGDSYVVNGQKIWTSRAEYSDLMILLARTTPKDQVQ 179 Query: 181 KRTDGLSVFIVDMREVKGKGLEIRPIRTMMNHATTEVFFTDMKVPAENLIGEEGKGFRYI 240 KRT+GLSVFIVDMRE K GL IRPIRTMMNHATTEVFFTDM+VPAENLIGEEGKGFRYI Sbjct: 180 KRTEGLSVFIVDMREAKKSGLTIRPIRTMMNHATTEVFFTDMRVPAENLIGEEGKGFRYI 239 Query: 241 LSGMNAERILIAAECVGDAKWFIAKATSYAKERSVFGRPIGQNQGIQFPIAKAYASMRAA 300 LSGMNAERILIAAECVGDAKWFIAKAT+YAKER VFGRPIGQNQGIQFPIAK+YASMRAA Sbjct: 240 LSGMNAERILIAAECVGDAKWFIAKATAYAKERVVFGRPIGQNQGIQFPIAKSYASMRAA 299 Query: 301 ELMVKEATRKYEAGLDCGAEANMAKMLAADASWEAANACVQTHGGFGFAEEYDVERKFRE 360 ELMVKEATRKYEAGLDCGAEANMAKMLAADAS+EAANAC+QTHGGFGFAEEYDVERKFRE Sbjct: 300 ELMVKEATRKYEAGLDCGAEANMAKMLAADASFEAANACIQTHGGFGFAEEYDVERKFRE 359 Query: 361 TRLYQVAPISTNLILSYVAEHVLGMPRSY 389 TRLYQVAPISTNLILSYVAEHVLGMPRSY Sbjct: 360 TRLYQVAPISTNLILSYVAEHVLGMPRSY 388 >ref|YP_004110203.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gb|ADU45470.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 390 Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/390 (88%), Positives = 373/390 (95%), Gaps = 1/390 (0%) Query: 1 MTAHDQNIDDHSDIRDAVAKLCAQFPGEYWRKLDRQMAYPKEFVDALTEAGYLSVLIPEE 60 M H D++ DIRDAVAKLCAQFPGEYWRKLDR+MAYPK FVDALTEAGYLSVLIPEE Sbjct: 1 MKHHAAEQDEYHDIRDAVAKLCAQFPGEYWRKLDREMAYPKAFVDALTEAGYLSVLIPEE 60 Query: 61 YGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHGNDAQKAKYLPKVATGELR 120 YGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGT+LRHG+D QKAK+LPK+A+GELR Sbjct: 61 YGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTLLRHGSDEQKAKWLPKIASGELR 120 Query: 121 LQAFGVTEPTSGTDTSSLKTFARRE-GDHYVVNGQKIWTSRAEYSDLMVLLARTTPKEQS 179 LQAFGVTEPTSGTDT+SLKTFA+++ G YVVNGQKIWTSRAEYSDLM+LLARTTPK+Q Sbjct: 121 LQAFGVTEPTSGTDTTSLKTFAKKDAGGDYVVNGQKIWTSRAEYSDLMILLARTTPKDQV 180 Query: 180 KKRTDGLSVFIVDMREVKGKGLEIRPIRTMMNHATTEVFFTDMKVPAENLIGEEGKGFRY 239 K+T+GLSVF+VDMRE +G GLEIRPIRTMMNHATTEVFFTDMKVP ENLIGEEGKGFRY Sbjct: 181 TKKTEGLSVFLVDMREARGHGLEIRPIRTMMNHATTEVFFTDMKVPKENLIGEEGKGFRY 240 Query: 240 ILSGMNAERILIAAECVGDAKWFIAKATSYAKERSVFGRPIGQNQGIQFPIAKAYASMRA 299 ILSGMNAERILIA+ECVGDAKWFIAKA++YAK+R+VFGRPIGQNQGIQFPIAKAYA+MRA Sbjct: 241 ILSGMNAERILIASECVGDAKWFIAKASAYAKDRTVFGRPIGQNQGIQFPIAKAYANMRA 300 Query: 300 AELMVKEATRKYEAGLDCGAEANMAKMLAADASWEAANACVQTHGGFGFAEEYDVERKFR 359 AELMVKEATRKYEAG+DCGAEANMAKMLAADAS+EAANAC+QTHGGFGFAEEYDVERKFR Sbjct: 301 AELMVKEATRKYEAGMDCGAEANMAKMLAADASFEAANACIQTHGGFGFAEEYDVERKFR 360 Query: 360 ETRLYQVAPISTNLILSYVAEHVLGMPRSY 389 ETRLYQVAPISTNLILS++AEHVLGMPRSY Sbjct: 361 ETRLYQVAPISTNLILSHLAEHVLGMPRSY 390 >ref|NP_946958.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] ref|YP_001990804.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris TIE-1] emb|CAE27053.1| putative acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gb|ACF00329.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 390 Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/390 (87%), Positives = 373/390 (95%), Gaps = 1/390 (0%) Query: 1 MTAHDQNIDDHSDIRDAVAKLCAQFPGEYWRKLDRQMAYPKEFVDALTEAGYLSVLIPEE 60 M H D++ DIRDAVAKLCAQFPGEYWRKLDR+MAYPK FVDALTEAGYLSVLIPEE Sbjct: 1 MKHHAAEQDEYHDIRDAVAKLCAQFPGEYWRKLDREMAYPKAFVDALTEAGYLSVLIPEE 60 Query: 61 YGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTVLRHGNDAQKAKYLPKVATGELR 120 YGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGT+LRHG+D QKAK+LPK+A+GELR Sbjct: 61 YGGAGLKLSAAAAILEEIQRAGCNGGGCHAQMYTMGTLLRHGSDEQKAKWLPKIASGELR 120 Query: 121 LQAFGVTEPTSGTDTSSLKTFARREGD-HYVVNGQKIWTSRAEYSDLMVLLARTTPKEQS 179 LQAFGVTEPTSGTDT+SLKTFA+++ + YVVNGQKIWTSRAEYSDLM+LLARTTPK+Q Sbjct: 121 LQAFGVTEPTSGTDTTSLKTFAKKDANGDYVVNGQKIWTSRAEYSDLMILLARTTPKDQV 180 Query: 180 KKRTDGLSVFIVDMREVKGKGLEIRPIRTMMNHATTEVFFTDMKVPAENLIGEEGKGFRY 239 K+T+GLSVF+VDMRE +G GLEIRPIRTMMNHATTEVFFTDMKVP ENLIGEEGKGFRY Sbjct: 181 TKKTEGLSVFLVDMREARGHGLEIRPIRTMMNHATTEVFFTDMKVPKENLIGEEGKGFRY 240 Query: 240 ILSGMNAERILIAAECVGDAKWFIAKATSYAKERSVFGRPIGQNQGIQFPIAKAYASMRA 299 ILSGMNAERILIA+ECVGDAKWFIAKA++YAK+R+VFGRPIGQNQGIQFPIAKAYA+MRA Sbjct: 241 ILSGMNAERILIASECVGDAKWFIAKASAYAKDRAVFGRPIGQNQGIQFPIAKAYANMRA 300 Query: 300 AELMVKEATRKYEAGLDCGAEANMAKMLAADASWEAANACVQTHGGFGFAEEYDVERKFR 359 AELMVKEATRKYEAG+DCGAEANMAKMLAADAS+EAANAC+QTHGGFGFAEEYDVERKFR Sbjct: 301 AELMVKEATRKYEAGMDCGAEANMAKMLAADASFEAANACIQTHGGFGFAEEYDVERKFR 360 Query: 360 ETRLYQVAPISTNLILSYVAEHVLGMPRSY 389 ETRLYQVAPISTNLILS++AEHVLGMPRSY Sbjct: 361 ETRLYQVAPISTNLILSHLAEHVLGMPRSY 390