BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0226.0009.p (296 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01000296.1| putative beta-lactamase [Oceanicola batsensis... 254 1e-65 ref|ZP_02189902.1| putative beta-lactamase [alpha proteobacteriu... 222 6e-56 ref|NP_774533.1| beta-lactamase [Bradyrhizobium japonicum USDA 1... 217 2e-54 gb|AAL34510.1|AF421147_1 putative beta-lactamase [Bradyrhizobium... 216 4e-54 ref|YP_001237352.1| putative metallo-beta-lactamase superfamily ... 216 5e-54 >ref|ZP_01000296.1| putative beta-lactamase [Oceanicola batsensis HTCC2597] gb|EAQ02227.1| putative beta-lactamase [Oceanicola batsensis HTCC2597] Length = 295 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 130/291 (44%), Positives = 175/291 (60%), Gaps = 2/291 (0%) Query: 2 QFAIGDATVDVIVDDDDFGLPLAEFLPGYDRGLIEAHRATLEPVFIDLARGVAKHAIQSF 61 G A +D I D D F LP LPG D ++ A L P +D G ++ SF Sbjct: 5 MLTFGAARIDKITDLDPFVLPATLLLPGRDLSELQGEAALLCPHHVDFDAGTLLISVHSF 64 Query: 62 VVRTGGRTLLIDACIGEHKDIPEIPAWHRRRGSGFLDRLRTCGVDPAGIDVVFCTHLHVD 121 ++R G +LID C+GE K P W RR +G+L+RL GV P +D+V CTHLH D Sbjct: 65 LLRVNGLNVLIDTCVGECKPRPRRADWDNRRATGYLERLAKAGVRPEDVDIVMCTHLHAD 124 Query: 122 HVGWNTRQDNGRWQPTFPNARYLFGRRELADWMTQHDAGRAPPIHARALEQSVIPIVDAG 181 HVGWNTR ++GRW+PTFPNARY+ G EL W + A HA A SV+PIV+AG Sbjct: 125 HVGWNTRLEDGRWRPTFPNARYVMGLHELEHWQAEEAAAPGAHNHA-AFADSVLPIVEAG 183 Query: 182 RVDLVDDGHQLGPGLRLVPLPGHTSGQMGLMVDYAQH-RAIFCGDAVHNPVQIFQPNLST 240 + V DG L G+ ++PL GH+ GQ+GL+++ + RA+FCGDA+H+PVQ+F+P+ S+ Sbjct: 184 LAETVTDGFSLSQGMDIIPLHGHSPGQIGLVLEGGGNGRAVFCGDAIHSPVQVFRPDWSS 243 Query: 241 SSCADPQLAGETRAKILAEAADSGRLVIPAHFRGPRCAHIRRDGGGYAPVF 291 C DP A +TR +L AA+ L++PAH R IRRDG G+ PV Sbjct: 244 GFCHDPAQAAKTRKDLLERAAEEDLLLLPAHTRSAYGFRIRRDGNGHRPVM 294 >ref|ZP_02189902.1| putative beta-lactamase [alpha proteobacterium BAL199] gb|EDP63232.1| putative beta-lactamase [alpha proteobacterium BAL199] Length = 292 Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 115/291 (39%), Positives = 161/291 (55%), Gaps = 5/291 (1%) Query: 1 MQFAIGDATVDVIVDDDDFGLPLAEFLPGYDRGLIEAHRATLEPVFIDLARGVAKHAIQS 60 + FA+GD +D I++ + G +FLP + L+E +R LEP +D A G+ +QS Sbjct: 3 LSFAVGDIRIDRILEQNLPGFDPFDFLPTLTKELLEENRHWLEPRSLDPASGLLIFPMQS 62 Query: 61 FVVRTGGRTLLIDACIGEHKDIPEIPAWHRRRGSGFLDRLRTCGVDPAGIDVVFCTHLHV 120 ++VR G T+LID+C+G HKD P P WH++ + ++D L GV A ID V CTHLH Sbjct: 63 YLVRDGRHTILIDSCVGNHKDRPTRPNWHQKDDTHYMDGLARAGVGVADIDYVMCTHLHP 122 Query: 121 DHVGWNTRQDNGRWQPTFPNARYLFGRRELADWMTQHDAGRAPPIHARALEQSVIPIVDA 180 DHVGWNTR +NGRW PTFPNARY+F +EL W TQH + SV+P+V+A Sbjct: 123 DHVGWNTRLENGRWVPTFPNARYVFSGKELEHWQTQHAKAEIA-----YMTDSVLPVVEA 177 Query: 181 GRVDLVDDGHQLGPGLRLVPLPGHTSGQMGLMVDYAQHRAIFCGDAVHNPVQIFQPNLST 240 G+V V H G++L+P PGHT + + H A+ GD +H +Q P+L Sbjct: 178 GQVVQVTSDHAFADGIQLMPTPGHTPDHFAVHLSSNGHDAVMSGDLIHTLLQCRHPHLVA 237 Query: 241 SSCADPQLAGETRAKILAEAADSGRLVIPAHFRGPRCAHIRRDGGGYAPVF 291 D +LA TR + ++ L+ AHF P H R G + F Sbjct: 238 KPDFDKELAVATRRAFMDRYCETDTLICSAHFPTPSIGHFVRHGDAFGFKF 288 >ref|NP_774533.1| beta-lactamase [Bradyrhizobium japonicum USDA 110] dbj|BAC53158.1| blr7893 [Bradyrhizobium japonicum USDA 110] Length = 291 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 109/287 (37%), Positives = 154/287 (53%), Gaps = 5/287 (1%) Query: 1 MQFAIGDATVDVIVDDDDFGLPLAEFLPGYDRGLIEAHRATLEPVFIDLARGVAKHAIQS 60 +++++GD T+ +++ + +P E LPG ++ +RA + V QS Sbjct: 5 LKYSVGDLTIHRVIEQETSFVPALEMLPGLTPEVLTENRAWMRQAKALDDNDVLLLCFQS 64 Query: 61 FVVRTGGRTLLIDACIGEHKDIPEIPAWHRRRGSGFLDRLRTCGVDPAGIDVVFCTHLHV 120 +VV+T T+LID+CIG K P P W+ + +L L G P ID V CTHLHV Sbjct: 65 YVVKTPHHTILIDSCIGNDKPRPNRPKWNMKTDDTYLGALGAAGFSPGDIDFVMCTHLHV 124 Query: 121 DHVGWNTRQDNGRWQPTFPNARYLFGRRELADWMTQHDAGRAPPIHARALEQSVIPIVDA 180 DHVGWNTR +NGRW PTFP ARY+F ++E W Q+ PP SV+P+V+A Sbjct: 125 DHVGWNTRLENGRWVPTFPKARYVFAKQEFDHWSAQNAKTEIPP-----FVDSVLPVVEA 179 Query: 181 GRVDLVDDGHQLGPGLRLVPLPGHTSGQMGLMVDYAQHRAIFCGDAVHNPVQIFQPNLST 240 R + V + HQ+G +R++P PGHT G + + V + A+F GD +H+P+Q P LS Sbjct: 180 KRHEFVGNDHQIGDHVRILPTPGHTPGHIAITVGRGKDDAVFSGDLMHSPLQTLYPELSI 239 Query: 241 SSCADPQLAGETRAKILAEAADSGRLVIPAHFRGPRCAHIRRDGGGY 287 DP A TR L D+ L AHF P IRR G + Sbjct: 240 KFDVDPAKAATTRRSFLERYCDTETLCCTAHFPSPSVGKIRRKGNAF 286 >gb|AAL34510.1|AF421147_1 putative beta-lactamase [Bradyrhizobium japonicum] Length = 289 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 108/287 (37%), Positives = 154/287 (53%), Gaps = 5/287 (1%) Query: 1 MQFAIGDATVDVIVDDDDFGLPLAEFLPGYDRGLIEAHRATLEPVFIDLARGVAKHAIQS 60 +++++GD T+ +++ + +P E LPG ++ +RA + V +S Sbjct: 3 LKYSVGDLTIHRVIEQETSFVPALEMLPGLTPEVLTENRAWMRQAKALDDNDVLLLCFKS 62 Query: 61 FVVRTGGRTLLIDACIGEHKDIPEIPAWHRRRGSGFLDRLRTCGVDPAGIDVVFCTHLHV 120 +VV+T T+LID+CIG K P P W+ + +L L G P ID V CTHLHV Sbjct: 63 YVVKTPHHTILIDSCIGNDKPRPNRPKWNMKTDDTYLGALGAAGFSPGDIDFVMCTHLHV 122 Query: 121 DHVGWNTRQDNGRWQPTFPNARYLFGRRELADWMTQHDAGRAPPIHARALEQSVIPIVDA 180 DHVGWNTR +NGRW PTFP ARY+F ++E W Q+ PP SV+P+V+A Sbjct: 123 DHVGWNTRLENGRWVPTFPKARYVFAKQEFDHWSAQNAKTEIPP-----FVDSVLPVVEA 177 Query: 181 GRVDLVDDGHQLGPGLRLVPLPGHTSGQMGLMVDYAQHRAIFCGDAVHNPVQIFQPNLST 240 R + V + HQ+G +R++P PGHT G + + V + A+F GD +H+P+Q P LS Sbjct: 178 KRHEFVGNDHQIGDHVRILPTPGHTPGHIAITVGRGKDDAVFSGDLMHSPLQTLYPELSI 237 Query: 241 SSCADPQLAGETRAKILAEAADSGRLVIPAHFRGPRCAHIRRDGGGY 287 DP A TR L D+ L AHF P IRR G + Sbjct: 238 KFDVDPAKAATTRRSFLERYCDTETLCCTAHFPSPSVGKIRRKGNAF 284 >ref|YP_001237352.1| putative metallo-beta-lactamase superfamily protein [Bradyrhizobium sp. BTAi1] gb|ABQ33446.1| putative metallo-beta-lactamase superfamily protein [Bradyrhizobium sp. BTAi1] Length = 288 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 110/288 (38%), Positives = 157/288 (54%), Gaps = 6/288 (2%) Query: 1 MQFAIGDATVDVIVDDDDFGLPLAEFLPGYDRGLIEAHRATLEPVFIDLARGVAKHAIQS 60 + F++ D T+ I++ + LP E P +++A R+TL+ A+ QS Sbjct: 3 LTFSVADLTIHRIIEQETTFLPAREIFPELTPEMLDAERSTLQAANALDAQDTLILCFQS 62 Query: 61 FVVRTGGRTLLIDACIGEHKDIPEIPAWHRRRGSGFLDRLRTCGVDPAGIDVVFCTHLHV 120 +VV+T T+LID+CIG K P W+ + ++ L G+ ID+V CTHLH Sbjct: 63 YVVKTPHHTILIDSCIGNDKPRAR-PVWNMKTDDTYMRALDAAGMSVDDIDIVMCTHLHT 121 Query: 121 DHVGWNTRQDNGRWQPTFPNARYLFGRRELADWMTQHDAGRAPPIHARALEQSVIPIVDA 180 DHVGWNTR+DN RW PTFPNARYLF +RE W+ Q+ PP SV+P+V+A Sbjct: 122 DHVGWNTRRDNDRWVPTFPNARYLFAQREYDYWVAQNAKAEVPP-----FADSVLPVVEA 176 Query: 181 GRVDLVDDGHQLGPGLRLVPLPGHTSGQMGLMVDYAQHRAIFCGDAVHNPVQIFQPNLST 240 R D+V D +G +RLVP PGHT G + + + + A+F GD +H+P+Q+ P LS Sbjct: 177 KRADIVMDDFAIGDHVRLVPTPGHTPGHVAIALGKGKDDAVFAGDLIHSPLQLAYPELSP 236 Query: 241 SSCADPQLAGETRAKILAEAADSGRLVIPAHFRGPRCAHIRRDGGGYA 288 DP A TR L D+ + AHF P I+R G G++ Sbjct: 237 KFDVDPAQAAVTRRTFLERYGDTATVCCTAHFPSPSAGRIKRKGNGFS 284