BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0225.0022.p         (168 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767897.1| hypothetical protein blr1257 [Bradyrhizobium ja...   314   2e-84
ref|YP_001237062.1| hypothetical protein BBta_0898 [Bradyrhizobi...   304   2e-81
ref|YP_001208455.1| hypothetical protein BRADO6636 [Bradyrhizobi...   304   2e-81
ref|ZP_01044845.1| hypothetical protein NB311A_06868 [Nitrobacte...   304   4e-81
ref|NP_949864.1| hypothetical protein RPA4530 [Rhodopseudomonas ...   303   7e-81

>ref|NP_767897.1| hypothetical protein blr1257 [Bradyrhizobium japonicum USDA 110]
 sp|Q89V02.1|Y1257_BRAJA RecName: Full=UPF0262 protein blr1257
 dbj|BAC46522.1| blr1257 [Bradyrhizobium japonicum USDA 110]
          Length = 165

 Score =  314 bits (805), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 151/165 (91%), Positives = 157/165 (95%)

Query: 1   MNKPPDDEDSNNRIVAVTLDEESIGRSGPDIEHERAIAIYDLIEQNLFAPEGAAGPGPYT 60
           M KPP+ +DSNNRIVAVTLDEESIGRSGPDIEHERAIAIYDLIEQNLFAPEGA G GP+T
Sbjct: 1   MTKPPEQDDSNNRIVAVTLDEESIGRSGPDIEHERAIAIYDLIEQNLFAPEGADGKGPFT 60

Query: 61  LHIAITGNRLMFDIRKEDGAPVVAHLLSLTPFRRVVKDYFMICDSYYQAIRTATPDKIEA 120
           LHI ITGNRLMFDIR+EDGAPVV HLLSL PFR +VKDYFMICDSYYQAIRTATPDKIEA
Sbjct: 61  LHIGITGNRLMFDIRREDGAPVVVHLLSLGPFRGIVKDYFMICDSYYQAIRTATPDKIEA 120

Query: 121 IDMGRRGIHDEGSRTLQERLKGKVRVDFETARRLFTLITVLHWKG 165
           IDMGRRGIHDEGSRTLQERLKGKVRVDFET+RRLFTLITVLHWKG
Sbjct: 121 IDMGRRGIHDEGSRTLQERLKGKVRVDFETSRRLFTLITVLHWKG 165


>ref|YP_001237062.1| hypothetical protein BBta_0898 [Bradyrhizobium sp. BTAi1]
 sp|A5EAG2.1|Y898_BRASB RecName: Full=UPF0262 protein BBta_0898
 gb|ABQ33156.1| hypothetical protein BBta_0898 [Bradyrhizobium sp. BTAi1]
          Length = 168

 Score =  304 bits (779), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 145/167 (86%), Positives = 154/167 (92%)

Query: 1   MNKPPDDEDSNNRIVAVTLDEESIGRSGPDIEHERAIAIYDLIEQNLFAPEGAAGPGPYT 60
           M + P  +D  NRIVAVTLDEESIGRSGPDIEHERAIAIYDL+E+NLFAPEGA G GP+T
Sbjct: 1   MTQHPPGDDRTNRIVAVTLDEESIGRSGPDIEHERAIAIYDLVEENLFAPEGADGQGPFT 60

Query: 61  LHIAITGNRLMFDIRKEDGAPVVAHLLSLTPFRRVVKDYFMICDSYYQAIRTATPDKIEA 120
           LH+ IT NRLMFDIRKEDG PVV HLLSL+PFRR+VKDYFMICDSYY AIRTATPDKIEA
Sbjct: 61  LHLGITANRLMFDIRKEDGTPVVTHLLSLSPFRRIVKDYFMICDSYYNAIRTATPDKIEA 120

Query: 121 IDMGRRGIHDEGSRTLQERLKGKVRVDFETARRLFTLITVLHWKGEG 167
           IDMGRRGIHDEGSRTLQERLKGKVRVDFET+RRLFTLITVLHWKGEG
Sbjct: 121 IDMGRRGIHDEGSRTLQERLKGKVRVDFETSRRLFTLITVLHWKGEG 167


>ref|YP_001208455.1| hypothetical protein BRADO6636 [Bradyrhizobium sp. ORS 278]
 sp|A4Z264.1|Y6636_BRASO RecName: Full=UPF0262 protein BRADO6636
 emb|CAL80240.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 168

 Score =  304 bits (779), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 145/167 (86%), Positives = 154/167 (92%)

Query: 1   MNKPPDDEDSNNRIVAVTLDEESIGRSGPDIEHERAIAIYDLIEQNLFAPEGAAGPGPYT 60
           M + P  +D  NRIVAVTLDEESIGRSGPDIEHERAIAIYDL+E+NLFAPEGA G GP+T
Sbjct: 1   MTQHPPGDDRTNRIVAVTLDEESIGRSGPDIEHERAIAIYDLVEENLFAPEGADGAGPFT 60

Query: 61  LHIAITGNRLMFDIRKEDGAPVVAHLLSLTPFRRVVKDYFMICDSYYQAIRTATPDKIEA 120
           LH+ IT NRLMFDIRKEDG PVV HLLSL+PFRR+VKDYFMICDSYY AIRTATPDKIEA
Sbjct: 61  LHLGITANRLMFDIRKEDGTPVVTHLLSLSPFRRIVKDYFMICDSYYNAIRTATPDKIEA 120

Query: 121 IDMGRRGIHDEGSRTLQERLKGKVRVDFETARRLFTLITVLHWKGEG 167
           IDMGRRGIHDEGSRTLQERLKGKVRVDFET+RRLFTLITVLHWKGEG
Sbjct: 121 IDMGRRGIHDEGSRTLQERLKGKVRVDFETSRRLFTLITVLHWKGEG 167


>ref|ZP_01044845.1| hypothetical protein NB311A_06868 [Nitrobacter sp. Nb-311A]
 gb|EAQ36850.1| hypothetical protein NB311A_06868 [Nitrobacter sp. Nb-311A]
          Length = 164

 Score =  304 bits (778), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 147/165 (89%), Positives = 156/165 (94%), Gaps = 1/165 (0%)

Query: 1   MNKPPDDEDSNNRIVAVTLDEESIGRSGPDIEHERAIAIYDLIEQNLFAPEGAAGPGPYT 60
           M K P  +DS NRIVAVTLDE+SIGRSGPDIEHERAIAIYDL+E+NLFAPEGA G GP+T
Sbjct: 1   MKKVPAKDDSRNRIVAVTLDEDSIGRSGPDIEHERAIAIYDLVEKNLFAPEGAEG-GPFT 59

Query: 61  LHIAITGNRLMFDIRKEDGAPVVAHLLSLTPFRRVVKDYFMICDSYYQAIRTATPDKIEA 120
           LHIAITGNRLMFDIR+EDGAPVV HLLSLTPFRR+VKDYFMICDSYYQAIRTATPDKIEA
Sbjct: 60  LHIAITGNRLMFDIRREDGAPVVTHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEA 119

Query: 121 IDMGRRGIHDEGSRTLQERLKGKVRVDFETARRLFTLITVLHWKG 165
           IDMGRRGIHDEGSRTLQERL GKVRVDF+TARRLFTLI+VLHWKG
Sbjct: 120 IDMGRRGIHDEGSRTLQERLNGKVRVDFDTARRLFTLISVLHWKG 164


>ref|NP_949864.1| hypothetical protein RPA4530 [Rhodopseudomonas palustris CGA009]
 ref|YP_001993985.1| hypothetical protein Rpal_5021 [Rhodopseudomonas palustris TIE-1]
 sp|Q6N178.1|Y4530_RHOPA RecName: Full=UPF0262 protein RPA4530
 sp|B3QA32.1|Y5021_RHOPT RecName: Full=UPF0262 protein Rpal_5021
 emb|CAE29970.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
 gb|ACF03510.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 163

 Score =  303 bits (775), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 145/161 (90%), Positives = 155/161 (96%), Gaps = 1/161 (0%)

Query: 5   PDDEDSNNRIVAVTLDEESIGRSGPDIEHERAIAIYDLIEQNLFAPEGAAGPGPYTLHIA 64
           P+ +DSNNRIVAVTLDEESIGRSGPDIEHERAIAIYDL+E+NLFAPEGA G GP+TLHI 
Sbjct: 4   PEPDDSNNRIVAVTLDEESIGRSGPDIEHERAIAIYDLVEKNLFAPEGA-GEGPFTLHIG 62

Query: 65  ITGNRLMFDIRKEDGAPVVAHLLSLTPFRRVVKDYFMICDSYYQAIRTATPDKIEAIDMG 124
           ITGNRLMFDIR+EDGAPV+ HLLSLTPFRR+VKDYFMICDSYYQAIRTATPDKIEAIDMG
Sbjct: 63  ITGNRLMFDIRREDGAPVITHLLSLTPFRRIVKDYFMICDSYYQAIRTATPDKIEAIDMG 122

Query: 125 RRGIHDEGSRTLQERLKGKVRVDFETARRLFTLITVLHWKG 165
           RRGIHDEGSRTLQERL GKVR+DFETARRLFTLI+VLHWKG
Sbjct: 123 RRGIHDEGSRTLQERLAGKVRIDFETARRLFTLISVLHWKG 163