BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0225.0018.p         (64 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767900.1| zinc-binding protein [Bradyrhizobium japonicum ...    84   9e-15
ref|YP_003594182.1| hypothetical protein Cseg_3124 [Caulobacter ...    81   5e-14
ref|YP_672755.1| zinc-binding protein [Mesorhizobium sp. BNC1] >...    78   6e-13
ref|YP_001417621.1| hypothetical protein Xaut_2724 [Xanthobacter...    77   6e-13
ref|NP_421143.1| hypothetical protein CC_2340 [Caulobacter cresc...    77   1e-12

>ref|NP_767900.1| zinc-binding protein [Bradyrhizobium japonicum USDA 110]
 sp|Q89UZ9.1|Y1260_BRAJA RecName: Full=UPF0243 zinc-binding protein bsr1260
 dbj|BAC46525.1| bsr1260 [Bradyrhizobium japonicum USDA 110]
          Length = 60

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 4/64 (6%)

Query: 1  MTDQARTPKATPSATRRACPICGKPVEQAFHPFCSARCRDVDLNRWLTGRYVVPGREDDE 60
          M DQ + P    +   + CPICGKP  QA HPFCS+RCRDVDLNRWL G YV+PGR+D+ 
Sbjct: 1  MDDQVKMP----TGPLKTCPICGKPAVQATHPFCSSRCRDVDLNRWLKGSYVIPGRDDEV 56

Query: 61 EDPE 64
          +D E
Sbjct: 57 DDVE 60


>ref|YP_003594182.1| hypothetical protein Cseg_3124 [Caulobacter segnis ATCC 21756]
 gb|ADG11564.1| protein of unknown function DUF329 [Caulobacter segnis ATCC
          21756]
          Length = 57

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 38/46 (82%)

Query: 18 ACPICGKPVEQAFHPFCSARCRDVDLNRWLTGRYVVPGREDDEEDP 63
           CPICGKPVE+AF PFCS RC DVDL RWL GRYVVPG +DD E+P
Sbjct: 4  GCPICGKPVEKAFRPFCSKRCADVDLQRWLVGRYVVPGGDDDAENP 49


>ref|YP_672755.1| zinc-binding protein [Mesorhizobium sp. BNC1]
 gb|ABG61590.1| protein of unknown function DUF329 [Chelativorans sp. BNC1]
          Length = 70

 Score = 77.8 bits (190), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 42/56 (75%)

Query: 9  KATPSATRRACPICGKPVEQAFHPFCSARCRDVDLNRWLTGRYVVPGREDDEEDPE 64
          K TP   +R CP CGKP  + F+PFCS RC+D+DLNRWL+G YV+PGR  +EE+ E
Sbjct: 10 KITPLRPKRPCPECGKPSSREFYPFCSKRCKDIDLNRWLSGSYVIPGRPAEEEEDE 65


>ref|YP_001417621.1| hypothetical protein Xaut_2724 [Xanthobacter autotrophicus Py2]
 gb|ABS67964.1| protein of unknown function DUF329 [Xanthobacter autotrophicus
          Py2]
          Length = 76

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 43/58 (74%), Gaps = 3/58 (5%)

Query: 10 ATPSATR---RACPICGKPVEQAFHPFCSARCRDVDLNRWLTGRYVVPGREDDEEDPE 64
           TPSA+R   + CPIC KP  + FHPFCS RC DVDL+RWL+G Y +PGR ++EED E
Sbjct: 14 GTPSASRYVSKPCPICSKPSAERFHPFCSKRCADVDLHRWLSGSYAIPGRPEEEEDGE 71


>ref|NP_421143.1| hypothetical protein CC_2340 [Caulobacter crescentus CB15]
 ref|YP_002517798.1| non-essential pilus assembly protein [Caulobacter crescentus
          NA1000]
 sp|Q9A5V7.1|Y2340_CAUCR RecName: Full=UPF0243 zinc-binding protein CC_2340
 sp|B8GYW7.1|Y2425_CAUCN RecName: Full=UPF0243 zinc-binding protein CCNA_02425
 gb|AAK24311.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gb|ACL95890.1| non-essential pilus assembly protein [Caulobacter crescentus
          NA1000]
          Length = 57

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/45 (73%), Positives = 37/45 (82%)

Query: 19 CPICGKPVEQAFHPFCSARCRDVDLNRWLTGRYVVPGREDDEEDP 63
          CPIC KPV+ AF PFCS RC DVDL RWL+GRYVV G +DDEE+P
Sbjct: 5  CPICAKPVDSAFRPFCSKRCADVDLQRWLSGRYVVAGGDDDEENP 49