BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0225.0008.p         (154 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770291.1| O-antigen export system ATP-binding protein [Br...   221   3e-56
ref|YP_578016.1| ABC transporter related [Nitrobacter hamburgens...   207   3e-52
ref|ZP_08630151.1| putative O-antigen export system ATP-binding ...   195   2e-48
ref|YP_003453407.1| lipopolysaccharide transport system ATP-bind...   183   8e-45
ref|YP_001241520.1| putative O-antigen/LPS export system ATP-bin...   167   5e-40

>ref|NP_770291.1| O-antigen export system ATP-binding protein [Bradyrhizobium
           japonicum USDA 110]
 dbj|BAC48916.1| rfbA [Bradyrhizobium japonicum USDA 110]
          Length = 260

 Score =  221 bits (562), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 101/143 (70%), Positives = 123/143 (86%)

Query: 1   MFDIGLGIDPELSGLDNIKLRGLLLGLDPDEIDQLIPGIGQFTELGDYLELPARTYSSGM 60
           +FDI +GID +LSG DNI+LRG+LLGL   EI+  IP I  FTELGDYL++P RTYSSGM
Sbjct: 106 IFDIAVGIDGDLSGYDNIRLRGMLLGLSAGEIESYIPDIADFTELGDYLDVPVRTYSSGM 165

Query: 61  LTRLTFAVATCFAPEILLMDEWILAGDAGFLAKAEQRLKSFVENASVLVLASHNEQICRT 120
           +TRLTFAVATCF+PEILLMDEWI+AGDA FLAKA++R++SFVE A++LVLASHN  ICR 
Sbjct: 166 MTRLTFAVATCFSPEILLMDEWIMAGDASFLAKAQRRIESFVERANILVLASHNLDICRK 225

Query: 121 WCEKAVWLDGGRVRAAGQIDEIL 143
           WC KAVW++ GR+RAAG+ID +L
Sbjct: 226 WCTKAVWMERGRIRAAGEIDAVL 248


>ref|YP_578016.1| ABC transporter related [Nitrobacter hamburgensis X14]
 gb|ABE63556.1| ABC transporter related protein [Nitrobacter hamburgensis X14]
          Length = 263

 Score =  207 bits (528), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 94/150 (62%), Positives = 120/150 (80%)

Query: 1   MFDIGLGIDPELSGLDNIKLRGLLLGLDPDEIDQLIPGIGQFTELGDYLELPARTYSSGM 60
           MFDI LGID E+SG DNI+LRGL+LGL P+EI++ +  I +FTELGDYL++P RTYSSGM
Sbjct: 109 MFDISLGIDSEISGYDNIRLRGLILGLSPEEIEERMADIVEFTELGDYLDIPVRTYSSGM 168

Query: 61  LTRLTFAVATCFAPEILLMDEWILAGDAGFLAKAEQRLKSFVENASVLVLASHNEQICRT 120
           +TRLTFAVATCF PEILLMDEWI+AGDA FL+KA+ R+++FVE AS+LVLASH+ ++ + 
Sbjct: 169 MTRLTFAVATCFEPEILLMDEWIMAGDAAFLSKAQHRVETFVEKASILVLASHSAEVLKR 228

Query: 121 WCEKAVWLDGGRVRAAGQIDEILSAYRSAT 150
           WC K V +  G VR  G++ + L AY   T
Sbjct: 229 WCNKGVLMHKGEVRFEGELAQTLDAYAEVT 258


>ref|ZP_08630151.1| putative O-antigen export system ATP-binding protein
           [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07024.1| putative O-antigen export system ATP-binding protein
           [Bradyrhizobiaceae bacterium SG-6C]
          Length = 257

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 96/148 (64%), Positives = 125/148 (84%)

Query: 1   MFDIGLGIDPELSGLDNIKLRGLLLGLDPDEIDQLIPGIGQFTELGDYLELPARTYSSGM 60
           MFDI LGID +LSG DNI+LRGLLLGL   EI+Q +P I  FTELGDYL++P RTYSSGM
Sbjct: 109 MFDISLGIDSDLSGYDNIRLRGLLLGLSSREIEQRLPLIVDFTELGDYLDMPVRTYSSGM 168

Query: 61  LTRLTFAVATCFAPEILLMDEWILAGDAGFLAKAEQRLKSFVENASVLVLASHNEQICRT 120
           + RLTFAVATC+ PE+LLMDEWI+AGDA F+AKA +R+++F++ AS+LVLASHN ++CR 
Sbjct: 169 MLRLTFAVATCYEPEVLLMDEWIMAGDAHFMAKARERVETFIQKASILVLASHNLEVCRR 228

Query: 121 WCEKAVWLDGGRVRAAGQIDEILSAYRS 148
           WC KA+WLD G +RA G +++I++AY++
Sbjct: 229 WCNKALWLDRGNIRALGPVEDIVAAYQA 256


>ref|YP_003453407.1| lipopolysaccharide transport system ATP-binding protein
           [Azospirillum sp. B510]
 dbj|BAI76863.1| lipopolysaccharide transport system ATP-binding protein
           [Azospirillum sp. B510]
          Length = 257

 Score =  183 bits (464), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 86/151 (56%), Positives = 109/151 (72%)

Query: 1   MFDIGLGIDPELSGLDNIKLRGLLLGLDPDEIDQLIPGIGQFTELGDYLELPARTYSSGM 60
           +FDI LG++ + +G +NI  RGL +G+ P EI Q I  I  FTELG++L +P RTYSSGM
Sbjct: 100 LFDIHLGLNMDATGYENILFRGLYMGMSPSEIRQHIEEIAAFTELGEFLSMPMRTYSSGM 159

Query: 61  LTRLTFAVATCFAPEILLMDEWILAGDAGFLAKAEQRLKSFVENASVLVLASHNEQICRT 120
             RL FAVATC  PEILLMDEW+LAGDA F  KA QRL  FV  +++LVLASHNEQ+   
Sbjct: 160 QLRLAFAVATCATPEILLMDEWVLAGDAQFFEKARQRLSRFVNQSNILVLASHNEQLLLE 219

Query: 121 WCEKAVWLDGGRVRAAGQIDEILSAYRSATL 151
           WC KAV++  G+V+A G + E+L+AY  A L
Sbjct: 220 WCTKAVYMANGQVQAFGPVREVLAAYNPAAL 250


>ref|YP_001241520.1| putative O-antigen/LPS export system ATP-binding protein
           [Bradyrhizobium sp. BTAi1]
 gb|ABQ37614.1| putative O-antigen/LPS export system ATP-binding protein
           [Bradyrhizobium sp. BTAi1]
          Length = 249

 Score =  167 bits (423), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 78/144 (54%), Positives = 103/144 (71%)

Query: 1   MFDIGLGIDPELSGLDNIKLRGLLLGLDPDEIDQLIPGIGQFTELGDYLELPARTYSSGM 60
           MFDIGLG+D E SG +NI+ RGL+LGL P+EI++ +P I +F ELGDYLELP RTYSSGM
Sbjct: 101 MFDIGLGMDEEASGYENIRTRGLILGLSPEEIEERVPEIAEFAELGDYLELPIRTYSSGM 160

Query: 61  LTRLTFAVATCFAPEILLMDEWILAGDAGFLAKAEQRLKSFVENASVLVLASHNEQICRT 120
           L RL F++A     +I+LMDEWI  GDA F  K   RL+   + + ++VLASH+  + R 
Sbjct: 161 LLRLVFSIAASIHGDIILMDEWIAVGDAQFRKKTHDRLQQITQRSGIVVLASHDFGLLRE 220

Query: 121 WCEKAVWLDGGRVRAAGQIDEILS 144
            C   ++LDGGRVRA G +D++L 
Sbjct: 221 TCNLGLYLDGGRVRAFGALDDVLK 244