BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0224.0051.p (487 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773893.1| hypothetical protein blr7253 [Bradyrhizobium ja... 818 0.0 ref|YP_319621.1| YcjX-like protein [Nitrobacter winogradskyi Nb-... 811 0.0 ref|ZP_01044873.1| YcjX-like protein [Nitrobacter sp. Nb-311A] >... 806 0.0 ref|YP_578579.1| protein of unknown function DUF463, YcjX-like p... 803 0.0 ref|YP_001242478.1| hypothetical protein BBta_6674 [Bradyrhizobi... 787 0.0 >ref|NP_773893.1| hypothetical protein blr7253 [Bradyrhizobium japonicum USDA 110] dbj|BAC52518.1| blr7253 [Bradyrhizobium japonicum USDA 110] Length = 489 Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/489 (84%), Positives = 433/489 (88%), Gaps = 2/489 (0%) Query: 1 MPPSFTDIVEEARLSARALLDYGEGFFNPTVRLGVTGLSRAGKTVFITALVHGLTRGGRF 60 M SF D+VEEARLSARAL+DYGE FFNPTVRLGVTGLSRAGKTVFITAL+HGLTRGGRF Sbjct: 1 MAFSFQDMVEEARLSARALIDYGEHFFNPTVRLGVTGLSRAGKTVFITALIHGLTRGGRF 60 Query: 61 PVFEAYASGRIGRAYLAPQPDDAVPRFAYENHVRTLVEERTWPSSTTDISELRLVIEYQR 120 PVFEAYASGRI RA+LAPQPDDAVPRFAYE H+R LVEER WP+ST DISELRLV++YQR Sbjct: 61 PVFEAYASGRIARAHLAPQPDDAVPRFAYETHLRALVEERHWPNSTVDISELRLVVDYQR 120 Query: 121 QNGADRTLTLDIVDYPGEWLLDLPLLNKSYEQWSAESLALSREPLRAKLATPWHAHLATL 180 NGADRTLTLDIVDYPGEWLLDLPLL KSYEQWSAESLALSRE RA LA WHAHLATL Sbjct: 121 HNGADRTLTLDIVDYPGEWLLDLPLLQKSYEQWSAESLALSREAPRAHLAAGWHAHLATL 180 Query: 181 KPEAREDEQAALSEARLFTDYLRACRDERFAMSLLPPGRFLMPGNLADTPALTFAPLDVP 240 KP+AREDEQA L+ A+LFTDYLRACR+ERFAMSLLPPGRFLMPGNLA +PALTFAPLDVP Sbjct: 181 KPDAREDEQATLTAAKLFTDYLRACREERFAMSLLPPGRFLMPGNLAGSPALTFAPLDVP 240 Query: 241 AGGSAGDGSLWAMMRRRFEAYKDVVVRPFFRDHFARLDRQIVLADALAAFNAGPEALHDL 300 GG A DGSLWAMM RRFEAYKDVVVRPFFRDHFARLDRQIVLADAL+AFN+GPEALHDL Sbjct: 241 VGGQAPDGSLWAMMVRRFEAYKDVVVRPFFRDHFARLDRQIVLADALSAFNSGPEALHDL 300 Query: 301 EAALAGILDCFRIGRSTILSTLFRPRIDRILFAATKADHLHHLSHDRLEAVLRRIVAKAA 360 EAALAGILDCF IGRST L++LFRPRIDRILFAATKADHLHH SHDRLEA LRR V +A Sbjct: 301 EAALAGILDCFNIGRSTFLTSLFRPRIDRILFAATKADHLHHSSHDRLEAALRRAVTQAV 360 Query: 361 ERAEYAGADIDVVALAAVRATREAQVQRGRDRLPSILGTPAPGEVANGERLDGETEVATF 420 RAE GA IDVVALAAVRATREAQV GRD+LPSILGTPA GE A GE DG TEVATF Sbjct: 361 ARAENTGAQIDVVALAAVRATREAQVAHGRDKLPSILGTPAAGESAGGEFFDGNTEVATF 420 Query: 421 PGDLPDNPEELFNG--GFRGLSNSDTEAADYRFLRFRPPKLERNGDAEPALPHIRLDRAL 478 PGDLP +PE LFNG FRGLS E +D+RFLRFRPPKL R GD EPALPHIRLDRAL Sbjct: 421 PGDLPLDPEPLFNGTDAFRGLSTEAAEKSDFRFLRFRPPKLAREGDDEPALPHIRLDRAL 480 Query: 479 QFLIGDKLQ 487 QFLIGDKL Sbjct: 481 QFLIGDKLS 489 >ref|YP_319621.1| YcjX-like protein [Nitrobacter winogradskyi Nb-255] gb|ABA06269.1| YcjX-like protein [Nitrobacter winogradskyi Nb-255] Length = 502 Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/489 (81%), Positives = 438/489 (89%), Gaps = 2/489 (0%) Query: 1 MPPSFTDIVEEARLSARALLDYGEGFFNPTVRLGVTGLSRAGKTVFITALVHGLTRGGRF 60 M SF+DIVEEARLSARALLDYGE FFNPT+RLGVTGLSRAGKTVFITALVHGL+RGGRF Sbjct: 14 MAASFSDIVEEARLSARALLDYGENFFNPTIRLGVTGLSRAGKTVFITALVHGLSRGGRF 73 Query: 61 PVFEAYASGRIGRAYLAPQPDDAVPRFAYENHVRTLVEERTWPSSTTDISELRLVIEYQR 120 PVFE+ ASGRI RA LAPQPDDA+PRF YE+HV TL+ ER WPSST DISELRLVI YQR Sbjct: 74 PVFESLASGRIARAQLAPQPDDAIPRFNYEHHVNTLIAERRWPSSTVDISELRLVIGYQR 133 Query: 121 QNGADRTLTLDIVDYPGEWLLDLPLLNKSYEQWSAESLALSREPLRAKLATPWHAHLATL 180 QNG+D+TLTLDIVDYPGEWLLDLPLL+KSYEQWSAESLALSR+ RA+LA WHAHLAT+ Sbjct: 134 QNGSDQTLTLDIVDYPGEWLLDLPLLDKSYEQWSAESLALSRQQPRARLAQAWHAHLATM 193 Query: 181 KPEAREDEQAALSEARLFTDYLRACRDERFAMSLLPPGRFLMPGNLADTPALTFAPLDVP 240 +P AREDEQA L+ ARLFTDYLR CRDERFAMSLLPPGRFLMPGNLA +PALTFAPLD+P Sbjct: 194 RPSAREDEQATLTAARLFTDYLRGCRDERFAMSLLPPGRFLMPGNLAGSPALTFAPLDLP 253 Query: 241 AGGSAGDGSLWAMMRRRFEAYKDVVVRPFFRDHFARLDRQIVLADALAAFNAGPEALHDL 300 AGG DGSLWAMMRRR+EAYKD+VVRPFFRDHF+RLDRQIVL D LAAFNAGPEAL+DL Sbjct: 254 AGGIPLDGSLWAMMRRRYEAYKDLVVRPFFRDHFSRLDRQIVLVDTLAAFNAGPEALYDL 313 Query: 301 EAALAGILDCFRIGRSTILSTLFRPRIDRILFAATKADHLHHLSHDRLEAVLRRIVAKAA 360 EAALAGILDC+R+GRST+LSTLFRPRIDRILFAATKADHLHH+SHDRLEA+LRRIV +AA Sbjct: 314 EAALAGILDCYRVGRSTLLSTLFRPRIDRILFAATKADHLHHVSHDRLEAILRRIVERAA 373 Query: 361 ERAEYAGADIDVVALAAVRATREAQVQRGRDRLPSILGTPAPGEVANGERLDGETEVATF 420 RAE AGA IDVVALAAVRATREAQV+ GR++LPSILGTP GE ANGE DG TEVATF Sbjct: 374 SRAEVAGATIDVVALAAVRATREAQVRCGREKLPSILGTPLAGEAANGETFDGNTEVATF 433 Query: 421 PGDLPDNPEELF--NGGFRGLSNSDTEAADYRFLRFRPPKLERNGDAEPALPHIRLDRAL 478 PGDLP++ LF NG FRGLS S + AD+RFLRFRPP+L+ G EP+LPHIRLDRAL Sbjct: 434 PGDLPEDVTSLFSGNGAFRGLSTSAMDQADFRFLRFRPPRLQNEGTGEPSLPHIRLDRAL 493 Query: 479 QFLIGDKLQ 487 QFLIGD+LQ Sbjct: 494 QFLIGDRLQ 502 >ref|ZP_01044873.1| YcjX-like protein [Nitrobacter sp. Nb-311A] gb|EAQ36878.1| YcjX-like protein [Nitrobacter sp. Nb-311A] Length = 489 Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/489 (81%), Positives = 437/489 (89%), Gaps = 2/489 (0%) Query: 1 MPPSFTDIVEEARLSARALLDYGEGFFNPTVRLGVTGLSRAGKTVFITALVHGLTRGGRF 60 M SF+DIVEEARLSARALLDYGE FFNPT+RLGVTGLSRAGKTVFITALVHGL+RGGRF Sbjct: 1 MAASFSDIVEEARLSARALLDYGENFFNPTIRLGVTGLSRAGKTVFITALVHGLSRGGRF 60 Query: 61 PVFEAYASGRIGRAYLAPQPDDAVPRFAYENHVRTLVEERTWPSSTTDISELRLVIEYQR 120 PVFE+ ASGRI RA LAPQPDD +PRF YE+HV TL+ ER WPSST DISELRLVI YQR Sbjct: 61 PVFESLASGRIARAQLAPQPDDDIPRFNYEHHVNTLIAERRWPSSTVDISELRLVIGYQR 120 Query: 121 QNGADRTLTLDIVDYPGEWLLDLPLLNKSYEQWSAESLALSREPLRAKLATPWHAHLATL 180 QNG+D+TLTLDIVDYPGEWLLDLPLL+KSYEQWSAESLALSR+ RA+LA WH HLATL Sbjct: 121 QNGSDQTLTLDIVDYPGEWLLDLPLLDKSYEQWSAESLALSRQQPRARLAQAWHEHLATL 180 Query: 181 KPEAREDEQAALSEARLFTDYLRACRDERFAMSLLPPGRFLMPGNLADTPALTFAPLDVP 240 +P AREDEQA L+ ARLFT+YLRACRDERFAMSLLPPGRFLMPGNLA +PALTFAPLD+P Sbjct: 181 RPSAREDEQATLAAARLFTNYLRACRDERFAMSLLPPGRFLMPGNLAGSPALTFAPLDLP 240 Query: 241 AGGSAGDGSLWAMMRRRFEAYKDVVVRPFFRDHFARLDRQIVLADALAAFNAGPEALHDL 300 AGG DGSLW MMRRR+EAYKD+VVRPFFRDHF+RLDRQIVL D LAAFNAGPEAL+DL Sbjct: 241 AGGIPLDGSLWTMMRRRYEAYKDLVVRPFFRDHFSRLDRQIVLVDTLAAFNAGPEALYDL 300 Query: 301 EAALAGILDCFRIGRSTILSTLFRPRIDRILFAATKADHLHHLSHDRLEAVLRRIVAKAA 360 EAALAGILDC+R+GRST+LSTLFRPRIDRILFAATKADHLHH+SHDRLEA+LRRIV +AA Sbjct: 301 EAALAGILDCYRVGRSTLLSTLFRPRIDRILFAATKADHLHHISHDRLEAILRRIVERAA 360 Query: 361 ERAEYAGADIDVVALAAVRATREAQVQRGRDRLPSILGTPAPGEVANGERLDGETEVATF 420 RAE AGA IDVVALAAVRATREAQV+ GR++LPSILGTP GE ANGE DG TEVATF Sbjct: 361 SRAEVAGAAIDVVALAAVRATREAQVRCGREKLPSILGTPLAGEAANGETFDGNTEVATF 420 Query: 421 PGDLPDNPEELF--NGGFRGLSNSDTEAADYRFLRFRPPKLERNGDAEPALPHIRLDRAL 478 PGDLP++ + LF NG FRGLS S + AD+RFLRFRPP+L+ G EP+LPHIRLDRAL Sbjct: 421 PGDLPEDVKSLFSGNGAFRGLSTSAMDQADFRFLRFRPPRLQNEGAGEPSLPHIRLDRAL 480 Query: 479 QFLIGDKLQ 487 QFLIGD+LQ Sbjct: 481 QFLIGDRLQ 489 >ref|YP_578579.1| protein of unknown function DUF463, YcjX-like protein [Nitrobacter hamburgensis X14] gb|ABE64119.1| protein of unknown function DUF463, YcjX-like protein [Nitrobacter hamburgensis X14] Length = 489 Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/489 (81%), Positives = 437/489 (89%), Gaps = 2/489 (0%) Query: 1 MPPSFTDIVEEARLSARALLDYGEGFFNPTVRLGVTGLSRAGKTVFITALVHGLTRGGRF 60 M SF+DIVEEARLSARALLDYGE FFNPTVRLGVTGLSRAGKTVFITALVHGL+RGGRF Sbjct: 1 MASSFSDIVEEARLSARALLDYGESFFNPTVRLGVTGLSRAGKTVFITALVHGLSRGGRF 60 Query: 61 PVFEAYASGRIGRAYLAPQPDDAVPRFAYENHVRTLVEERTWPSSTTDISELRLVIEYQR 120 PVFE+ ASGRI RA LAPQPDDA+PRF YENHV+TL+ +R WP+ST DISELRLVI YQ Sbjct: 61 PVFESLASGRIARAQLAPQPDDAIPRFNYENHVQTLIADRRWPNSTVDISELRLVIGYQG 120 Query: 121 QNGADRTLTLDIVDYPGEWLLDLPLLNKSYEQWSAESLALSREPLRAKLATPWHAHLATL 180 QNG DRTLTLDIVDYPGEWLLDLPLL+KSYEQWSAESLALSR+ RA+LA WHAH ATL Sbjct: 121 QNGTDRTLTLDIVDYPGEWLLDLPLLDKSYEQWSAESLALSRQQPRARLAQAWHAHHATL 180 Query: 181 KPEAREDEQAALSEARLFTDYLRACRDERFAMSLLPPGRFLMPGNLADTPALTFAPLDVP 240 +P AREDEQA L+ ARLFTDYLRACRDERFAMSLLPPGRFLMPGNLA +PALTFAPLD+P Sbjct: 181 RPSAREDEQATLTAARLFTDYLRACRDERFAMSLLPPGRFLMPGNLAGSPALTFAPLDLP 240 Query: 241 AGGSAGDGSLWAMMRRRFEAYKDVVVRPFFRDHFARLDRQIVLADALAAFNAGPEALHDL 300 AGG A DGSLW MMRRR+EAYKD+VVRPFFRDHF+RLDRQIVL D LAAFNAGPEAL+DL Sbjct: 241 AGGIAPDGSLWTMMRRRYEAYKDLVVRPFFRDHFSRLDRQIVLVDTLAAFNAGPEALYDL 300 Query: 301 EAALAGILDCFRIGRSTILSTLFRPRIDRILFAATKADHLHHLSHDRLEAVLRRIVAKAA 360 EAALAGILDC+R+GRST L TLFRPRIDRILFAATKADHLHH SHDRLEA+LRR+V +AA Sbjct: 301 EAALAGILDCYRVGRSTFLGTLFRPRIDRILFAATKADHLHHTSHDRLEAILRRVVERAA 360 Query: 361 ERAEYAGADIDVVALAAVRATREAQVQRGRDRLPSILGTPAPGEVANGERLDGETEVATF 420 RAE AGA IDVVALAAVRATREAQV+ GR++LPSILGTP GEVANG+ LDG TEVATF Sbjct: 361 SRAEVAGAAIDVVALAAVRATREAQVRCGREKLPSILGTPLAGEVANGQPLDGNTEVATF 420 Query: 421 PGDLPDNPEELF--NGGFRGLSNSDTEAADYRFLRFRPPKLERNGDAEPALPHIRLDRAL 478 PGDLP + + LF NG FRGLS + + AD+RFLRFRPP+L+ +G +PALPHIRLDRAL Sbjct: 421 PGDLPTDLKGLFSGNGAFRGLSTTAVDQADFRFLRFRPPRLQNDGTRDPALPHIRLDRAL 480 Query: 479 QFLIGDKLQ 487 QFLIGD+LQ Sbjct: 481 QFLIGDRLQ 489 >ref|YP_001242478.1| hypothetical protein BBta_6674 [Bradyrhizobium sp. BTAi1] gb|ABQ38572.1| hypothetical protein BBta_6674 [Bradyrhizobium sp. BTAi1] Length = 487 Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/485 (81%), Positives = 424/485 (87%), Gaps = 1/485 (0%) Query: 4 SFTDIVEEARLSARALLDYGEGFFNPTVRLGVTGLSRAGKTVFITALVHGLTRGGRFPVF 63 SF++IVEEARLSARALLDYGE FFNPT+RLGVTGLSRAGKTVFITAL+HGL RGGR PVF Sbjct: 3 SFSEIVEEARLSARALLDYGESFFNPTIRLGVTGLSRAGKTVFITALIHGLIRGGRMPVF 62 Query: 64 EAYASGRIGRAYLAPQPDDAVPRFAYENHVRTLVEERTWPSSTTDISELRLVIEYQRQNG 123 EA +SGRI RA+LAPQPDD VPRFAYE+HVR LV ER WPSST DISELRLVIE+QR NG Sbjct: 63 EALSSGRIARAFLAPQPDDGVPRFAYESHVRALVAERRWPSSTVDISELRLVIEFQRGNG 122 Query: 124 ADRTLTLDIVDYPGEWLLDLPLLNKSYEQWSAESLALSREPLRAKLATPWHAHLATLKPE 183 A+RTLTLDIVDYPGEWLLDLPLLNKSYEQW+ ESLALSR R+ LA WHAHLATL E Sbjct: 123 AERTLTLDIVDYPGEWLLDLPLLNKSYEQWARESLALSRSEPRSHLAGAWHAHLATLSAE 182 Query: 184 AREDEQAALSEARLFTDYLRACRDERFAMSLLPPGRFLMPGNLADTPALTFAPLDVPAGG 243 REDE A L ARLFTDYLRACRD+RFAMSLLPPGRFLMPGNLA +PALTFAPLDVPA G Sbjct: 183 GREDEPATLESARLFTDYLRACRDDRFAMSLLPPGRFLMPGNLAGSPALTFAPLDVPADG 242 Query: 244 SAGDGSLWAMMRRRFEAYKDVVVRPFFRDHFARLDRQIVLADALAAFNAGPEALHDLEAA 303 A DGSLWAMM RR+E+YKD+VVRPFFRDHFARLDRQIVL DALAAFNAGPEALHDLEAA Sbjct: 243 RAPDGSLWAMMARRYESYKDIVVRPFFRDHFARLDRQIVLVDALAAFNAGPEALHDLEAA 302 Query: 304 LAGILDCFRIGRSTILSTLFRPRIDRILFAATKADHLHHLSHDRLEAVLRRIVAKAAERA 363 L GILDCFR+GR ++LS LFRPRIDRILFAATKADHLHH SHDRLEAVLRR V A RA Sbjct: 303 LTGILDCFRVGRGSVLSALFRPRIDRILFAATKADHLHHTSHDRLEAVLRRAVNHAVARA 362 Query: 364 EYAGADIDVVALAAVRATREAQVQRGRDRLPSILGTPAPGEVANGERLDGETEVATFPGD 423 E GA+IDVVALAAVRATREA V RGRD+LPS+LGTPA GE ANGE DG+TEVATFPG+ Sbjct: 363 ESTGAEIDVVALAAVRATREALVARGRDKLPSLLGTPAAGESANGEIFDGQTEVATFPGE 422 Query: 424 LPDNPEELFNGG-FRGLSNSDTEAADYRFLRFRPPKLERNGDAEPALPHIRLDRALQFLI 482 LP + EELF GG +RGLS++ + D+RFLRFRPP LER EPALPHIRLDRALQFLI Sbjct: 423 LPADAEELFKGGAYRGLSSAGADGTDFRFLRFRPPLLEREAGGEPALPHIRLDRALQFLI 482 Query: 483 GDKLQ 487 GD+LQ Sbjct: 483 GDRLQ 487