BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0224.0034.p         (54 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08629844.1| hypothetical protein CSIRO_2939 [Bradyrhizobi...    37   0.72 
ref|YP_004499923.1| integral membrane sensor signal transduction...    35   3.3  
ref|ZP_06189275.1| hypothetical protein SOD_a02270 [Serratia odo...    34   7.0  

>ref|ZP_08629844.1| hypothetical protein CSIRO_2939 [Bradyrhizobiaceae bacterium
          SG-6C]
 gb|EGP07487.1| hypothetical protein CSIRO_2939 [Bradyrhizobiaceae bacterium
          SG-6C]
          Length = 52

 Score = 37.4 bits (85), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 1  MSAPE-DDKQRDREIAANEAERQAVSAVRVSSWAIGL 36
          M+ PE D+++R  +IA NEA R+  S VR+++WAIG+
Sbjct: 1  MNQPEQDNRERSLKIAENEAAREHRSDVRLTTWAIGI 37


>ref|YP_004499923.1| integral membrane sensor signal transduction histidine kinase
           [Serratia sp. AS12]
 ref|YP_004504875.1| integral membrane sensor signal transduction histidine kinase
           [Serratia sp. AS9]
 gb|AEF44614.1| integral membrane sensor signal transduction histidine kinase
           [Serratia sp. AS9]
 gb|AEF49566.1| integral membrane sensor signal transduction histidine kinase
           [Serratia sp. AS12]
 gb|AEG27273.1| integral membrane sensor signal transduction histidine kinase
           [Serratia sp. AS13]
          Length = 488

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 23/33 (69%)

Query: 22  QAVSAVRVSSWAIGLAVIVGIIAVALVWAWMTR 54
           Q  SA+R++ W++GL V+ G++A    + W+TR
Sbjct: 171 QLSSAIRLALWSMGLVVLFGLLAGGFAFRWVTR 203


>ref|ZP_06189275.1| hypothetical protein SOD_a02270 [Serratia odorifera 4Rx13]
 gb|EFA17577.1| hypothetical protein SOD_a02270 [Serratia odorifera 4Rx13]
          Length = 488

 Score = 34.3 bits (77), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 23/33 (69%)

Query: 22  QAVSAVRVSSWAIGLAVIVGIIAVALVWAWMTR 54
           Q  SAV+++ W++GL V+ G++A    + W+TR
Sbjct: 171 QFSSAVKMALWSMGLVVVFGLLAGGFAFRWVTR 203