BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0224.0025.p (164 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773905.1| hypothetical protein bll7265 [Bradyrhizobium ja... 260 4e-68 ref|YP_578590.1| hypothetical protein Nham_3400 [Nitrobacter ham... 252 1e-65 ref|YP_001203547.1| hypothetical protein BRADO1417 [Bradyrhizobi... 249 1e-64 ref|YP_531216.1| hypothetical protein RPC_1335 [Rhodopseudomonas... 244 5e-63 ref|YP_570834.1| hypothetical protein RPD_3712 [Rhodopseudomonas... 243 9e-63 >ref|NP_773905.1| hypothetical protein bll7265 [Bradyrhizobium japonicum USDA 110] dbj|BAC52530.1| bll7265 [Bradyrhizobium japonicum USDA 110] Length = 165 Score = 260 bits (665), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 126/165 (76%), Positives = 141/165 (85%), Gaps = 1/165 (0%) Query: 1 MGIKRIGKHLLEHRWRVRRDFPPCVLDAIERAIKAGEATHSGQIRFVVEGALDGVPLFRN 60 M IKRI +HL++H WR +R FPP VL IE+AIK GE THSGQ+RFVVEGALDG PLFRN Sbjct: 1 MSIKRIARHLVQHHWRAKRIFPPKVLTRIEQAIKQGETTHSGQVRFVVEGALDGGPLFRN 60 Query: 61 QPARERALDVFSHLRIWDTDHNNGVLIYLLLADRDVEIVADRGVDAKVGHAGWEAICRTM 120 QPARERALDVFSHLRIWDT HNNGVLIYLLLADRDVEI+ADRG+DAKVG AGWE ICR M Sbjct: 61 QPARERALDVFSHLRIWDTAHNNGVLIYLLLADRDVEIIADRGIDAKVGAAGWETICRAM 120 Query: 121 ETDFRAGRFEQGVIKGIEAVSRELAKYFPPPAGP-NELPDKPVVI 164 E +FR+G+FE+GVI+GI AVSRELAK+FPP NELPD PV + Sbjct: 121 EAEFRSGQFERGVIEGIAAVSRELAKHFPPQGSHRNELPDAPVTM 165 >ref|YP_578590.1| hypothetical protein Nham_3400 [Nitrobacter hamburgensis X14] gb|ABE64130.1| protein of unknown function DUF477 [Nitrobacter hamburgensis X14] Length = 165 Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 122/165 (73%), Positives = 140/165 (84%), Gaps = 1/165 (0%) Query: 1 MGIKRIGKHLLEHRWRVRRDFPPCVLDAIERAIKAGEATHSGQIRFVVEGALDGVPLFRN 60 M I+RIGKHLL HRWRVR+ PP + AIERAI+AGE THSGQ+ F VEGALDG+PLFRN Sbjct: 1 MDIRRIGKHLLGHRWRVRKHLPPEAMAAIERAIRAGETTHSGQVVFAVEGALDGIPLFRN 60 Query: 61 QPARERALDVFSHLRIWDTDHNNGVLIYLLLADRDVEIVADRGVDAKVGHAGWEAICRTM 120 QPARERALDVF+HL+IWDT HNNG+LIYLLLADRDVEIVADRG+ A+VG A W+ IC M Sbjct: 61 QPARERALDVFAHLKIWDTAHNNGILIYLLLADRDVEIVADRGIHARVGEAVWKTICVAM 120 Query: 121 ETDFRAGRFEQGVIKGIEAVSRELAKYFPPP-AGPNELPDKPVVI 164 E +F+ GRFE GV++GI AVSR+LAK+FP AGPNELPD PVVI Sbjct: 121 EAEFKRGRFEAGVVEGIAAVSRQLAKHFPKQGAGPNELPDAPVVI 165 >ref|YP_001203547.1| hypothetical protein BRADO1417 [Bradyrhizobium sp. ORS 278] emb|CAL75310.1| conserved hypothetical protein (putative NAD-dependent aldehyde dehydrogenases) [Bradyrhizobium sp. ORS 278] Length = 165 Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 124/165 (75%), Positives = 138/165 (83%), Gaps = 1/165 (0%) Query: 1 MGIKRIGKHLLEHRWRVRRDFPPCVLDAIERAIKAGEATHSGQIRFVVEGALDGVPLFRN 60 M I RIG+HLL H WR+RR F L IE+AIKAGE TH+GQ+RF VEGALDG PL+RN Sbjct: 1 MSIGRIGRHLLHHHWRLRRIFTADALARIEQAIKAGERTHAGQVRFAVEGALDGKPLWRN 60 Query: 61 QPARERALDVFSHLRIWDTDHNNGVLIYLLLADRDVEIVADRGVDAKVGHAGWEAICRTM 120 QP RERALDVFS LRIWDT HNNGVLIYLLLADRDVEI+ADRG+DA VG AGWE ICR M Sbjct: 61 QPPRERALDVFSSLRIWDTAHNNGVLIYLLLADRDVEIIADRGIDALVGAAGWERICRAM 120 Query: 121 ETDFRAGRFEQGVIKGIEAVSRELAKYFPPPAG-PNELPDKPVVI 164 E +FRAGRFEQGVI G+ AVSRELA+++PP AG PNELPD PVV+ Sbjct: 121 EAEFRAGRFEQGVIYGVAAVSRELARHYPPHAGEPNELPDAPVVL 165 >ref|YP_531216.1| hypothetical protein RPC_1335 [Rhodopseudomonas palustris BisB18] gb|ABD86897.1| protein of unknown function DUF477 [Rhodopseudomonas palustris BisB18] Length = 165 Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 120/165 (72%), Positives = 140/165 (84%), Gaps = 1/165 (0%) Query: 1 MGIKRIGKHLLEHRWRVRRDFPPCVLDAIERAIKAGEATHSGQIRFVVEGALDGVPLFRN 60 MG+KRIGKHL +R RV++ FPP LDAIE+AI+A EA+H+GQIRFVVEGALDG PLFR+ Sbjct: 1 MGLKRIGKHLWANRSRVQKAFPPQTLDAIEQAIRACEASHAGQIRFVVEGALDGAPLFRD 60 Query: 61 QPARERALDVFSHLRIWDTDHNNGVLIYLLLADRDVEIVADRGVDAKVGHAGWEAICRTM 120 QPARERALDVFS LR+WDTD NNGVLIY+LLADRDVEI+ADRG+DAKVG A WEAIC+ + Sbjct: 61 QPARERALDVFSQLRVWDTDRNNGVLIYVLLADRDVEIIADRGIDAKVGAAEWEAICQAI 120 Query: 121 ETDFRAGRFEQGVIKGIEAVSRELAKYFPPPAG-PNELPDKPVVI 164 E +FR GRFEQG I GI+A+ R LA++FP A NELPD PVVI Sbjct: 121 EAEFRDGRFEQGAINGIKAIGRHLARHFPGDASDANELPDGPVVI 165 >ref|YP_570834.1| hypothetical protein RPD_3712 [Rhodopseudomonas palustris BisB5] gb|ABE40933.1| protein of unknown function DUF477 [Rhodopseudomonas palustris BisB5] Length = 165 Score = 243 bits (619), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 119/165 (72%), Positives = 136/165 (82%), Gaps = 1/165 (0%) Query: 1 MGIKRIGKHLLEHRWRVRRDFPPCVLDAIERAIKAGEATHSGQIRFVVEGALDGVPLFRN 60 MGI+RIGKHL+ R V++ FPP LDAIERAI A EA H+GQIRFVVEGALDG PLFR+ Sbjct: 1 MGIRRIGKHLITSRRLVQKAFPPTALDAIERAISASEAQHAGQIRFVVEGALDGAPLFRD 60 Query: 61 QPARERALDVFSHLRIWDTDHNNGVLIYLLLADRDVEIVADRGVDAKVGHAGWEAICRTM 120 QPARERALDVFS LRIWDT+HNNGVLIYLLLADRDVEIVADRG+DA+VG A WE ICR M Sbjct: 61 QPARERALDVFSQLRIWDTEHNNGVLIYLLLADRDVEIVADRGIDARVGAAAWEGICREM 120 Query: 121 ETDFRAGRFEQGVIKGIEAVSRELAKYFPPP-AGPNELPDKPVVI 164 E+ FR GRFE GV++GI+ ++ LA +FP G NELPD PVV+ Sbjct: 121 ESAFREGRFEAGVLRGIDLITMHLAAHFPKEDPGDNELPDAPVVV 165