BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0224.0024.p (298 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773906.1| hypothetical protein bll7266 [Bradyrhizobium ja... 295 7e-78 ref|YP_001242491.1| hypothetical protein BBta_6688 [Bradyrhizobi... 288 7e-76 ref|YP_578591.1| hypothetical protein Nham_3401 [Nitrobacter ham... 283 2e-74 ref|YP_001203546.1| hypothetical protein BRADO1416 [Bradyrhizobi... 278 6e-73 ref|YP_487559.1| hypothetical protein RPB_3955 [Rhodopseudomonas... 267 2e-69 >ref|NP_773906.1| hypothetical protein bll7266 [Bradyrhizobium japonicum USDA 110] dbj|BAC52531.1| bll7266 [Bradyrhizobium japonicum USDA 110] Length = 340 Score = 295 bits (754), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 157/257 (61%), Positives = 189/257 (73%), Gaps = 15/257 (5%) Query: 1 MTAARVILLAFLLGFVCPAWAEVAVPPLTGRVVDQTGTLSAGDIASLTDRLKDLEARKGS 60 MT + + A LL F PA+A+VAVP LTGRVVDQTGTLS+GDIA+LT +L++ E RKGS Sbjct: 45 MTLSVWFVFALLLTFAFPAFADVAVPQLTGRVVDQTGTLSSGDIAALTQKLRNFETRKGS 104 Query: 61 QIAVLIVPTTGEETIEQFSIRVAEAWKIGRKKVDDGALLVVAKNDRHLRIEVGYGLEGVL 120 Q+AVLIVP+T ETIEQFSIRVAEAWKIGRKKVDDGA+LVVAKNDRHLRIEVGYGLEG L Sbjct: 105 QVAVLIVPSTQPETIEQFSIRVAEAWKIGRKKVDDGAILVVAKNDRHLRIEVGYGLEGAL 164 Query: 121 SDAVTHRIIDEDITPKFKAGDFAGGISAGVDRMIRLINGEQLPAPEPEHWQAPNLVDFAN 180 +D + RIIDE ITPKF+ GDF+GGIS GVDRMIR+I+GE LP P P V+F N Sbjct: 165 TDVTSRRIIDEIITPKFRTGDFSGGISDGVDRMIRVIDGEPLPVPSPS-------VNFGN 217 Query: 181 P--------VVIFGVIIVAGFLRALLGRLLGSVATGGIVGVFTWMMAGSLATALVVGLFA 232 V +F I V GF RA+LGRLLGS+ TGGI+ TW++ GS A A+V+G+ Sbjct: 218 LDDIGPLFFVTVFASIGVGGFFRAMLGRLLGSLVTGGIIAALTWLILGSFALAMVLGVAG 277 Query: 233 AVAALIFGGLNFGGPAA 249 + I ++ GP+ Sbjct: 278 FIIGFIADVVSAMGPST 294 >ref|YP_001242491.1| hypothetical protein BBta_6688 [Bradyrhizobium sp. BTAi1] gb|ABQ38585.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 295 Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 154/254 (60%), Positives = 183/254 (72%), Gaps = 9/254 (3%) Query: 1 MTAARVILLAFLLGFVCPAWAEVAVPPLTGRVVDQTGTLSAGDIASLTDRLKDLEARKGS 60 M+A + +L L+ A+VAVP LTGRVVDQTGTLS+ DIA LT +LKDLE RKGS Sbjct: 1 MSAVKALLATLLVCLATMVLADVAVPQLTGRVVDQTGTLSSSDIAGLTQKLKDLETRKGS 60 Query: 61 QIAVLIVPTTGEETIEQFSIRVAEAWKIGRKKVDDGALLVVAKNDRHLRIEVGYGLEGVL 120 Q+AVLIVPTT ETIEQFSIRVAE WKIGRKKVDDGALLV+AK DR LRIEVGYGLEG L Sbjct: 61 QVAVLIVPTTQPETIEQFSIRVAETWKIGRKKVDDGALLVIAKTDRKLRIEVGYGLEGSL 120 Query: 121 SDAVTHRIIDEDITPKFKAGDFAGGISAGVDRMIRLINGEQLPAPEPEHWQAPNLVDFAN 180 +D RIIDE ITPKF+ GDFAGGI AGVDR+I +INGE LP P+P+ +L DF + Sbjct: 121 TDVTARRIIDEVITPKFRQGDFAGGIDAGVDRIIGVINGETLPVPQPQASHGTDL-DFDS 179 Query: 181 -----PVVIFGVIIVAGFLRALLGRLLGSVATGGIVGVFTWMMAGS---LATALVVGLFA 232 PV +FG +++ G LR LLGRL+GS+ATGG +GV W++ GS A + + G Sbjct: 180 LTSFAPVALFGALVIGGILRTLLGRLIGSLATGGAMGVIAWLLVGSAGLAALSAIAGFVI 239 Query: 233 AVAALIFGGLNFGG 246 A A F G+N G Sbjct: 240 AFIADSFAGMNTPG 253 >ref|YP_578591.1| hypothetical protein Nham_3401 [Nitrobacter hamburgensis X14] gb|ABE64131.1| protein of unknown function DUF477 [Nitrobacter hamburgensis X14] Length = 288 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 148/240 (61%), Positives = 179/240 (74%), Gaps = 2/240 (0%) Query: 1 MTAARVILLAFLLGFVCPAWAEVAVPPLTGRVVDQTGTLSAGDIASLTDRLKDLEARKGS 60 M + LLA +L +V A+A+VAVPPLTG VVDQT TLS+ ASL +LK E RKGS Sbjct: 1 MRTLKATLLALMLCWVGAAFADVAVPPLTGHVVDQTATLSSDQKASLEQKLKAFEDRKGS 60 Query: 61 QIAVLIVPTTGEETIEQFSIRVAEAWKIGRKKVDDGALLVVAKNDRHLRIEVGYGLEGVL 120 Q+AVLIVPTT ETIEQ+SIRVAE WKIGRKKVDDGA+L+VAK+DR LRIEVGYGLEG L Sbjct: 61 QVAVLIVPTTEPETIEQYSIRVAEQWKIGRKKVDDGAILLVAKDDRKLRIEVGYGLEGAL 120 Query: 121 SDAVTHRIIDEDITPKFKAGDFAGGISAGVDRMIRLINGEQLPAPEPEHWQAPN--LVDF 178 +D + RIIDE+I PKF+ GDFAGGISAGVDRM+R+I+GE LPAP+P+ A N + D Sbjct: 121 TDLTSKRIIDEEIVPKFRTGDFAGGISAGVDRMLRVIDGEPLPAPKPQAQYANNFSIEDL 180 Query: 179 ANPVVIFGVIIVAGFLRALLGRLLGSVATGGIVGVFTWMMAGSLATALVVGLFAAVAALI 238 NP VI GV+++ G R + GRL GSVA GGIVG+ W+ GSL + G+ A V L+ Sbjct: 181 FNPFVIVGVLVLGGIFRGVFGRLFGSVAVGGIVGLVAWLFIGSLVVSGAAGVLAFVFTLL 240 >ref|YP_001203546.1| hypothetical protein BRADO1416 [Bradyrhizobium sp. ORS 278] emb|CAL75309.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 299 Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 148/243 (60%), Positives = 176/243 (72%), Gaps = 9/243 (3%) Query: 13 LGFVCPAWAEVAVPPLTGRVVDQTGTLSAGDIASLTDRLKDLEARKGSQIAVLIVPTTGE 72 +G WA+VAVP LTGRVVDQTGTLS+ DIA LT +LKDLEARKGSQ+AVLIVPTT Sbjct: 16 VGLATLVWADVAVPQLTGRVVDQTGTLSSSDIAGLTQKLKDLEARKGSQVAVLIVPTTQP 75 Query: 73 ETIEQFSIRVAEAWKIGRKKVDDGALLVVAKNDRHLRIEVGYGLEGVLSDAVTHRIIDED 132 ETIEQFS+RVAEAWKIGR+KVDDGALLV+AK DR LRIEVGYGLEG L+D RIIDE Sbjct: 76 ETIEQFSLRVAEAWKIGRRKVDDGALLVIAKGDRKLRIEVGYGLEGSLTDVTARRIIDEV 135 Query: 133 ITPKFKAGDFAGGISAGVDRMIRLINGEQLPAPEPEHWQAPNLVDFAN-----PVVIFGV 187 ITPKF+ GDFAGGI AGVDR+I ++NGE LP P+P+ +L DF + PV +FG Sbjct: 136 ITPKFRTGDFAGGIDAGVDRIIGVVNGETLPVPQPQASHGNDL-DFDSLSSFAPVALFGS 194 Query: 188 IIVAGFLRALLGRLLGSVATGGIVGVFTWMMAGSLATALVVGLFAAVAALI---FGGLNF 244 +++ G LR LGRLLG+ AT G +GV W+M S A + + V A I F ++ Sbjct: 195 LVIGGILRTFLGRLLGAFATAGAMGVLAWLMVQSATLAALSAIAGFVIAFIGGSFMSMDT 254 Query: 245 GGP 247 GP Sbjct: 255 PGP 257 >ref|YP_487559.1| hypothetical protein RPB_3955 [Rhodopseudomonas palustris HaA2] gb|ABD08648.1| Protein of unknown function DUF477 [Rhodopseudomonas palustris HaA2] Length = 302 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 150/246 (60%), Positives = 175/246 (71%), Gaps = 10/246 (4%) Query: 1 MTAARVILLAFLL-----GFVCPAWAEVAVPPLTGRVVDQTGTLSAGDIASLTDRLKDLE 55 M AR +LA L+ GF A A++AVP LTGRVVDQTGTL + IA L +LK E Sbjct: 2 MRMARASVLAALMCWLVVGFTTIAQAQLAVPQLTGRVVDQTGTLDSDVIARLDQKLKAFE 61 Query: 56 ARKGSQIAVLIVPTTGEETIEQFSIRVAEAWKIGRKKVDDGALLVVAKNDRHLRIEVGYG 115 ARKGSQIAVLIVPTT E IE F+IRVAEAWKIGRKKVDDGA+L+VAKNDR LRIEVGYG Sbjct: 62 ARKGSQIAVLIVPTTQPEAIEPFAIRVAEAWKIGRKKVDDGAILLVAKNDRKLRIEVGYG 121 Query: 116 LEGVLSDAVTHRIIDEDITPKFKAGDFAGGISAGVDRMIRLINGEQLPAPEPEHWQAPNL 175 LEG L D RIIDE ITPKF+ GDFAGGI AGVDRMI +I+GE LPAPEP+H +P Sbjct: 122 LEGALPDVTAKRIIDEIITPKFRTGDFAGGIEAGVDRMIAVIDGEALPAPEPQHEWSPES 181 Query: 176 VD----FANPVVIFGVIIVAGFLRALLGRLLGSVATGGIVGVFTWMMAGSLATALVVGLF 231 D +A P +IFG ++V GFL++LLGR+ S TG I+G WM A++VG Sbjct: 182 FDQVSGWAIP-LIFGTLVVNGFLQSLLGRMAASALTGSIIGGVAWMFGLGFPIAMIVGFA 240 Query: 232 AAVAAL 237 A + AL Sbjct: 241 AFLFAL 246