BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0224.0023.p         (203 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001203545.1| putative signal peptide [Bradyrhizobium sp. ...   378   e-103
ref|YP_001242492.1| hypothetical protein BBta_6689 [Bradyrhizobi...   377   e-103
ref|NP_773907.1| lipoprotein [Bradyrhizobium japonicum USDA 110]...   374   e-102
ref|YP_578592.1| hypothetical protein Nham_3402 [Nitrobacter ham...   372   e-101
ref|YP_783226.1| hypothetical protein RPE_4322 [Rhodopseudomonas...   369   e-100

>ref|YP_001203545.1| putative signal peptide [Bradyrhizobium sp. ORS 278]
 emb|CAL75308.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS 278]
          Length = 209

 Score =  378 bits (970), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/203 (89%), Positives = 191/203 (94%)

Query: 1   MRKLWTVLAALATLSLTNCGYNAIQTNDEQVKSSWSEVVNQYQRRADLVPNLVNSVKGFA 60
           MR+L TVLAAL TLSLTNCGYNAIQTNDEQVK++WSEVVNQYQRRADLVPNLVNSVKGFA
Sbjct: 7   MRRLLTVLAALMTLSLTNCGYNAIQTNDEQVKAAWSEVVNQYQRRADLVPNLVNSVKGFA 66

Query: 61  QQEKDVLLGVTNARAKVGSIQATPEVLNDPAAFQKFTQAQGELTSALSRLLVVTENYPQL 120
           QQEKDVLLGVTNARAKVGS+QATP+V+NDPAA QKF  AQ ELT ALSRLLVVTENYPQL
Sbjct: 67  QQEKDVLLGVTNARAKVGSVQATPDVVNDPAALQKFQAAQSELTGALSRLLVVTENYPQL 126

Query: 121 KSDALFRDLMAQLEGTENRITVARNRYIKTVQDYNVGIRTFPNNLTAMAFGYKEKPNFTV 180
           KSD LFRDLM+QLEGTENRITVARNRYIK VQDYNVGIRTFPNNLTAMAFGYKEK NFTV
Sbjct: 127 KSDQLFRDLMSQLEGTENRITVARNRYIKAVQDYNVGIRTFPNNLTAMAFGYKEKANFTV 186

Query: 181 DNEKEISTAPKVDFNNPSPAPSK 203
           +NE+EIS APKVDFN PSPAPSK
Sbjct: 187 ENEREISVAPKVDFNAPSPAPSK 209


>ref|YP_001242492.1| hypothetical protein BBta_6689 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38586.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 203

 Score =  377 bits (968), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/203 (89%), Positives = 191/203 (94%)

Query: 1   MRKLWTVLAALATLSLTNCGYNAIQTNDEQVKSSWSEVVNQYQRRADLVPNLVNSVKGFA 60
           MRKL TVLAAL TLSLTNCGYNAIQTNDEQVK++WSEVVNQYQRRADLVPNLVNSVKGFA
Sbjct: 1   MRKLLTVLAALMTLSLTNCGYNAIQTNDEQVKAAWSEVVNQYQRRADLVPNLVNSVKGFA 60

Query: 61  QQEKDVLLGVTNARAKVGSIQATPEVLNDPAAFQKFTQAQGELTSALSRLLVVTENYPQL 120
           QQEKDVLLGVTNARAKVGS+QATP+V+NDPAA QKF  AQ ELT ALSRLLVVTENYPQL
Sbjct: 61  QQEKDVLLGVTNARAKVGSVQATPDVVNDPAALQKFQAAQSELTGALSRLLVVTENYPQL 120

Query: 121 KSDALFRDLMAQLEGTENRITVARNRYIKTVQDYNVGIRTFPNNLTAMAFGYKEKPNFTV 180
           KSDALFRDLM+QLEGTENRITVARNRYIK VQ+YNVGIRTFPNNLTAMAFGYKEK NFTV
Sbjct: 121 KSDALFRDLMSQLEGTENRITVARNRYIKAVQEYNVGIRTFPNNLTAMAFGYKEKANFTV 180

Query: 181 DNEKEISTAPKVDFNNPSPAPSK 203
           +NE+EIS APKVDFN PSP PSK
Sbjct: 181 ENEREISVAPKVDFNAPSPQPSK 203


>ref|NP_773907.1| lipoprotein [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52532.1| bll7267 [Bradyrhizobium japonicum USDA 110]
          Length = 202

 Score =  374 bits (959), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/203 (88%), Positives = 194/203 (95%), Gaps = 1/203 (0%)

Query: 1   MRKLWTVLAALATLSLTNCGYNAIQTNDEQVKSSWSEVVNQYQRRADLVPNLVNSVKGFA 60
           MRK+ TVLAALA+LSLTNCGYNAIQ+ DEQ+K++WSEVVNQYQRRADLVPNLVNSVKGFA
Sbjct: 1   MRKILTVLAALASLSLTNCGYNAIQSEDEQIKANWSEVVNQYQRRADLVPNLVNSVKGFA 60

Query: 61  QQEKDVLLGVTNARAKVGSIQATPEVLNDPAAFQKFTQAQGELTSALSRLLVVTENYPQL 120
           QQEKDVLLGVTNARAKVGSIQATPEVLNDPAAFQKF  AQGEL+SALSRLLVVTENYPQL
Sbjct: 61  QQEKDVLLGVTNARAKVGSIQATPEVLNDPAAFQKFQAAQGELSSALSRLLVVTENYPQL 120

Query: 121 KSDALFRDLMAQLEGTENRITVARNRYIKTVQDYNVGIRTFPNNLTAMAFGYKEKPNFTV 180
           KSDALF+DLM+QLEGTENRITVARNRYIK VQ+YNV IR+FP NLTAM FGYKEKPNF+V
Sbjct: 121 KSDALFKDLMSQLEGTENRITVARNRYIKAVQEYNVTIRSFPTNLTAMTFGYKEKPNFSV 180

Query: 181 DNEKEISTAPKVDFNNPSPAPSK 203
           +NEKEISTAPKVDF NP+PAPSK
Sbjct: 181 ENEKEISTAPKVDF-NPAPAPSK 202


>ref|YP_578592.1| hypothetical protein Nham_3402 [Nitrobacter hamburgensis X14]
 gb|ABE64132.1| LemA [Nitrobacter hamburgensis X14]
          Length = 203

 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 181/203 (89%), Positives = 188/203 (92%)

Query: 1   MRKLWTVLAALATLSLTNCGYNAIQTNDEQVKSSWSEVVNQYQRRADLVPNLVNSVKGFA 60
           MRK  TVLAALATLSLTNCGYNAIQ+ DEQ+KS WSEVVNQYQRRADLVPNLVNSVKGFA
Sbjct: 1   MRKFLTVLAALATLSLTNCGYNAIQSQDEQIKSDWSEVVNQYQRRADLVPNLVNSVKGFA 60

Query: 61  QQEKDVLLGVTNARAKVGSIQATPEVLNDPAAFQKFTQAQGELTSALSRLLVVTENYPQL 120
           QQEKDVLLGVTNARAKVGSIQATPEVLNDPAAFQKF  AQGEL+SALSRLLVVTENYPQL
Sbjct: 61  QQEKDVLLGVTNARAKVGSIQATPEVLNDPAAFQKFQAAQGELSSALSRLLVVTENYPQL 120

Query: 121 KSDALFRDLMAQLEGTENRITVARNRYIKTVQDYNVGIRTFPNNLTAMAFGYKEKPNFTV 180
           KSDALFRDLM+QLEGTENRITVARNRYIK VQDYNV +R+FP NLTAMA GYK KPNFTV
Sbjct: 121 KSDALFRDLMSQLEGTENRITVARNRYIKAVQDYNVTVRSFPTNLTAMALGYKTKPNFTV 180

Query: 181 DNEKEISTAPKVDFNNPSPAPSK 203
           DNEK+ISTAPKVDFN    APSK
Sbjct: 181 DNEKDISTAPKVDFNPAPAAPSK 203


>ref|YP_783226.1| hypothetical protein RPE_4322 [Rhodopseudomonas palustris BisA53]
 gb|ABJ08246.1| LemA family protein [Rhodopseudomonas palustris BisA53]
          Length = 202

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/203 (87%), Positives = 191/203 (94%), Gaps = 1/203 (0%)

Query: 1   MRKLWTVLAALATLSLTNCGYNAIQTNDEQVKSSWSEVVNQYQRRADLVPNLVNSVKGFA 60
           MR++ TVLAALATLSLTNCGYN IQT D+QVK+SWSEVVNQYQRRADLVPNLVNSVKGFA
Sbjct: 1   MRRILTVLAALATLSLTNCGYNTIQTEDQQVKASWSEVVNQYQRRADLVPNLVNSVKGFA 60

Query: 61  QQEKDVLLGVTNARAKVGSIQATPEVLNDPAAFQKFTQAQGELTSALSRLLVVTENYPQL 120
           QQEKDVLLGVTNARAKVGSIQATP+VLNDPAAFQKFT AQ EL+ ALSRLLVVTENYPQL
Sbjct: 61  QQEKDVLLGVTNARAKVGSIQATPDVLNDPAAFQKFTAAQSELSGALSRLLVVTENYPQL 120

Query: 121 KSDALFRDLMAQLEGTENRITVARNRYIKTVQDYNVGIRTFPNNLTAMAFGYKEKPNFTV 180
           KSDALF+DLMAQLEGTENRITVARNRYIK+VQDYNV +R+ P N TAM FGYKEKPNFTV
Sbjct: 121 KSDALFKDLMAQLEGTENRITVARNRYIKSVQDYNVTVRSVPTNFTAMMFGYKEKPNFTV 180

Query: 181 DNEKEISTAPKVDFNNPSPAPSK 203
           +NEKEISTAPKVDF NP+PAP+K
Sbjct: 181 ENEKEISTAPKVDF-NPAPAPAK 202