BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0224.0017.p (676 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242500.1| putative dehydrogenase/oxidase [Bradyrhizobi... 994 0.0 ref|YP_001203536.1| putative dehydrogenase/oxidase/molybdopterin... 974 0.0 ref|NP_773911.1| carbon monoxide dehydrogenase large chain [Brad... 951 0.0 ref|ZP_08627666.1| carbon monoxide dehydrogenase large chain [Br... 888 0.0 ref|YP_487561.1| carbon-monoxide dehydrogenase [Rhodopseudomonas... 887 0.0 >ref|YP_001242500.1| putative dehydrogenase/oxidase [Bradyrhizobium sp. BTAi1] gb|ABQ38594.1| putative dehydrogenase/oxidase [Bradyrhizobium sp. BTAi1] Length = 777 Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust. Identities = 482/553 (87%), Positives = 518/553 (93%) Query: 1 MNILPGNMRFGAGQPVKRLEDQRLVTGKGHFIDDKPQDGALWLHVLRSPHAHANIKSIDA 60 MNILP NMRFG+GQPVKRLEDQRL+TGKG FIDDKP DGALWL+VLRSPHAHA I SID Sbjct: 1 MNILPNNMRFGSGQPVKRLEDQRLLTGKGQFIDDKPDDGALWLYVLRSPHAHAKILSIDT 60 Query: 61 KTALEMPGVKAVYTGADLVKDDIGTLPTLAIFKRPDGSPMTVPPRRLLAHEVVRYAGEGV 120 A E+ GV+A+YTGADLV DD+GT+PTLAIFKRPDG PMTVPPRRLLAHEVVRY GE V Sbjct: 61 AAAREIAGVQAIYTGADLVADDVGTIPTLAIFKRPDGKPMTVPPRRLLAHEVVRYTGEAV 120 Query: 121 AAVVATSRVLAQTAAEAIEIDYEVLPSVVDPVEAIKPGAPAVWPEAPDNIVAAMSYGDAA 180 AAVVATSRV+AQ AAEAI +DYEVLP+V DPV+A++PGAP VW EAPDNIVAAMSYGDAA Sbjct: 121 AAVVATSRVIAQEAAEAIVVDYEVLPAVTDPVQALEPGAPVVWAEAPDNIVAAMSYGDAA 180 Query: 181 KVEEAFANAAHKVSLDLVSQRLVPSAMEPRSTIAEIEKKTGRLILHVQSQTPGSTRDLLA 240 KVEEAFA+A HKVSLD+VSQRLVPSAMEPRSTIAEIEKKTGRL+L+VQSQTP STRD+LA Sbjct: 181 KVEEAFASAPHKVSLDIVSQRLVPSAMEPRSTIAEIEKKTGRLLLYVQSQTPASTRDVLA 240 Query: 241 ESILKRPKDSVRVLVGDIGGGFGQKTSLYPEDGIVAYAATKLNEKIRWRGDRTDEFVGGT 300 E++LKRPK+SVRVLVGDIGGGFGQKT+LYPEDGIVAYAATKL +KIRWR +RTDEFVGGT Sbjct: 241 EAVLKRPKESVRVLVGDIGGGFGQKTNLYPEDGIVAYAATKLAKKIRWRAERTDEFVGGT 300 Query: 301 HGRDLTSTGEFALDAKGRVLAYRVRSIGGTGAYSSGTANIIPLVLGPFVQTGVYDLPLVH 360 HGRDLTST EFALDAKG+VLAYRVRSIG TGAYSSG ANIIPLVLGPFVQTGVYDLPLVH Sbjct: 301 HGRDLTSTAEFALDAKGKVLAYRVRSIGATGAYSSGAANIIPLVLGPFVQTGVYDLPLVH 360 Query: 361 FEVKSVMTHTAPVGAYRGAGRPEAVFIVERLFDAAARQIGMDPRTIRKVNYIKPAQLPYT 420 FEVK+VMTHTAPVGAYRGAGRPEAVFIVERLFD AARQIG+DPRTIRK NYIKPAQLPYT Sbjct: 361 FEVKTVMTHTAPVGAYRGAGRPEAVFIVERLFDTAARQIGIDPRTIRKANYIKPAQLPYT 420 Query: 421 NAVGQVYDSGAFAHMLERASDLADWNGFAARKKAAKKKGLLYGRGLTSYIEWTGGRAHTE 480 NAVGQVYDSGAFAHMLERAS LADW+GF ARK+ AKK+G+LYGRGLTSYIEWTGGRAHTE Sbjct: 421 NAVGQVYDSGAFAHMLERASKLADWDGFNARKREAKKRGMLYGRGLTSYIEWTGGRAHTE 480 Query: 481 KVSLHATAEGRVILWSGTMAMGQGLATTYTQMVADTLGISMDKIDVVQGDTDLATGFGSV 540 KVSLHAT+EGRVIL SGTMAMGQGL TTYTQM++DTLGI +DKIDVVQGDTDLATGFGSV Sbjct: 481 KVSLHATSEGRVILHSGTMAMGQGLQTTYTQMISDTLGIPLDKIDVVQGDTDLATGFGSV 540 Query: 541 GSRSLFVGGTAVC 553 GSRSLFVGGTAV Sbjct: 541 GSRSLFVGGTAVA 553 >ref|YP_001203536.1| putative dehydrogenase/oxidase/molybdopterin binding protein [Bradyrhizobium sp. ORS 278] emb|CAL75299.1| putative dehydrogenase/oxidase; molybdopterin binding protein [Bradyrhizobium sp. ORS 278] Length = 777 Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/553 (86%), Positives = 518/553 (93%) Query: 1 MNILPGNMRFGAGQPVKRLEDQRLVTGKGHFIDDKPQDGALWLHVLRSPHAHANIKSIDA 60 MNILP NMRFGAGQPVKRLEDQRL+TGKG FIDDKP+DGALWL VLRSPHAHA I SID Sbjct: 1 MNILPNNMRFGAGQPVKRLEDQRLLTGKGQFIDDKPEDGALWLTVLRSPHAHAKILSIDT 60 Query: 61 KTALEMPGVKAVYTGADLVKDDIGTLPTLAIFKRPDGSPMTVPPRRLLAHEVVRYAGEGV 120 A E+PGV+A+YTGADLV DD+GT+PTLAIFKRPDG PMTVPPRRLLAH+VVR+ GE V Sbjct: 61 AAAREIPGVEAIYTGADLVADDVGTIPTLAIFKRPDGKPMTVPPRRLLAHDVVRFTGEAV 120 Query: 121 AAVVATSRVLAQTAAEAIEIDYEVLPSVVDPVEAIKPGAPAVWPEAPDNIVAAMSYGDAA 180 AAVVATSR +AQ AAEAI +DYEVLP+V DPV+A++PGAP VW EAPDNIVAAMSYGDAA Sbjct: 121 AAVVATSRAIAQEAAEAIVVDYEVLPAVTDPVKALEPGAPVVWAEAPDNIVAAMSYGDAA 180 Query: 181 KVEEAFANAAHKVSLDLVSQRLVPSAMEPRSTIAEIEKKTGRLILHVQSQTPGSTRDLLA 240 KVEEAFA+A HKVSLD+VSQRLVPSAMEPRSTIAEIEKKTGRL+L+VQSQTP STRD+LA Sbjct: 181 KVEEAFASAPHKVSLDIVSQRLVPSAMEPRSTIAEIEKKTGRLLLYVQSQTPASTRDVLA 240 Query: 241 ESILKRPKDSVRVLVGDIGGGFGQKTSLYPEDGIVAYAATKLNEKIRWRGDRTDEFVGGT 300 +++LKRPKDS+RVLVGDIGGGFGQKT+LYPEDGIVAYAATKL +KIRWR +RTDEFVGGT Sbjct: 241 DAVLKRPKDSIRVLVGDIGGGFGQKTNLYPEDGIVAYAATKLAKKIRWRAERTDEFVGGT 300 Query: 301 HGRDLTSTGEFALDAKGRVLAYRVRSIGGTGAYSSGTANIIPLVLGPFVQTGVYDLPLVH 360 HGRDLTST EFALDAKG+VLAYRVRSIG TGAYSSG ANIIPLVLGPFVQTGVYDLPLVH Sbjct: 301 HGRDLTSTAEFALDAKGKVLAYRVRSIGATGAYSSGAANIIPLVLGPFVQTGVYDLPLVH 360 Query: 361 FEVKSVMTHTAPVGAYRGAGRPEAVFIVERLFDAAARQIGMDPRTIRKVNYIKPAQLPYT 420 FE+K+VMTHTAPVGAYRGAGRPEAVFIVERLFD AARQIG+DPRTIRK NYIKPAQLPYT Sbjct: 361 FEIKTVMTHTAPVGAYRGAGRPEAVFIVERLFDTAARQIGIDPRTIRKANYIKPAQLPYT 420 Query: 421 NAVGQVYDSGAFAHMLERASDLADWNGFAARKKAAKKKGLLYGRGLTSYIEWTGGRAHTE 480 NAVGQVYDSGAFAHMLERA+ LADW+GF ARK+ AKK+G+LYGRGLTSYIEWTGGRAHTE Sbjct: 421 NAVGQVYDSGAFAHMLERAAKLADWDGFNARKREAKKRGMLYGRGLTSYIEWTGGRAHTE 480 Query: 481 KVSLHATAEGRVILWSGTMAMGQGLATTYTQMVADTLGISMDKIDVVQGDTDLATGFGSV 540 KVSLHAT+EGRVIL SGTMAMGQGL TTYTQM++DTLGI +DKIDVVQGDTDLATGFGSV Sbjct: 481 KVSLHATSEGRVILHSGTMAMGQGLQTTYTQMISDTLGIPLDKIDVVQGDTDLATGFGSV 540 Query: 541 GSRSLFVGGTAVC 553 GSRSLFVGGTAV Sbjct: 541 GSRSLFVGGTAVA 553 >ref|NP_773911.1| carbon monoxide dehydrogenase large chain [Bradyrhizobium japonicum USDA 110] dbj|BAC52536.1| carbon monoxide dehydrogenase large chain [Bradyrhizobium japonicum USDA 110] Length = 841 Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/552 (87%), Positives = 515/552 (93%) Query: 1 MNILPGNMRFGAGQPVKRLEDQRLVTGKGHFIDDKPQDGALWLHVLRSPHAHANIKSIDA 60 MNILPGN+RFGAGQPVKRLEDQRL+TGKG FIDDKPQDGALWLHVLRSPHAHA I SID Sbjct: 68 MNILPGNLRFGAGQPVKRLEDQRLLTGKGQFIDDKPQDGALWLHVLRSPHAHAKIVSIDT 127 Query: 61 KTALEMPGVKAVYTGADLVKDDIGTLPTLAIFKRPDGSPMTVPPRRLLAHEVVRYAGEGV 120 A MPGV AVYTGADLV+DDIG++PTL+IFKRPDG PMTVPPRRLLAHEVVRY GE V Sbjct: 128 SAAAGMPGVTAVYTGADLVRDDIGSIPTLSIFKRPDGKPMTVPPRRLLAHEVVRYTGEAV 187 Query: 121 AAVVATSRVLAQTAAEAIEIDYEVLPSVVDPVEAIKPGAPAVWPEAPDNIVAAMSYGDAA 180 AAVVA SR AQ+AAEAI ++Y+V P+VVDPVEA+KPGAP VWPEAPDNIV AM+YGDAA Sbjct: 188 AAVVAASRAEAQSAAEAIVVEYDVQPAVVDPVEAVKPGAPVVWPEAPDNIVGAMAYGDAA 247 Query: 181 KVEEAFANAAHKVSLDLVSQRLVPSAMEPRSTIAEIEKKTGRLILHVQSQTPGSTRDLLA 240 KV+EAFA AAH V LD++SQRLVPSAMEPRSTIAEI+KKTGRL+LHVQSQTP STRD+LA Sbjct: 248 KVDEAFAKAAHTVELDIISQRLVPSAMEPRSTIAEIDKKTGRLLLHVQSQTPASTRDVLA 307 Query: 241 ESILKRPKDSVRVLVGDIGGGFGQKTSLYPEDGIVAYAATKLNEKIRWRGDRTDEFVGGT 300 ++LKRPKDSVRVLVGDIGGGFGQKT+LYPEDGIVAYAATKL++KIRWRGDRTDEFVGGT Sbjct: 308 GAVLKRPKDSVRVLVGDIGGGFGQKTNLYPEDGIVAYAATKLSKKIRWRGDRTDEFVGGT 367 Query: 301 HGRDLTSTGEFALDAKGRVLAYRVRSIGGTGAYSSGTANIIPLVLGPFVQTGVYDLPLVH 360 HGRDLTST FALD KG+VLAYRV+SIG TGAYSSG ANIIPLVLGPFVQTGVYDLPLVH Sbjct: 368 HGRDLTSTASFALDEKGKVLAYRVKSIGCTGAYSSGAANIIPLVLGPFVQTGVYDLPLVH 427 Query: 361 FEVKSVMTHTAPVGAYRGAGRPEAVFIVERLFDAAARQIGMDPRTIRKVNYIKPAQLPYT 420 FEVKSVMTHTAPVGAYRGAGRPEAVFIVERLFDAAAR+IGMDPR IRK NYIKPAQLPYT Sbjct: 428 FEVKSVMTHTAPVGAYRGAGRPEAVFIVERLFDAAARKIGMDPRAIRKANYIKPAQLPYT 487 Query: 421 NAVGQVYDSGAFAHMLERASDLADWNGFAARKKAAKKKGLLYGRGLTSYIEWTGGRAHTE 480 NA GQVYDSGAFAHML+RA LADW+GFAARKKAAKKKGLLYGRGLTSYIEWTGGRAHTE Sbjct: 488 NAAGQVYDSGAFAHMLDRAVKLADWDGFAARKKAAKKKGLLYGRGLTSYIEWTGGRAHTE 547 Query: 481 KVSLHATAEGRVILWSGTMAMGQGLATTYTQMVADTLGISMDKIDVVQGDTDLATGFGSV 540 KVSLHAT++GRV+L SGTMAMGQGL TTYTQM+ADTLGI+MDKIDVVQGDTDLA GFGSV Sbjct: 548 KVSLHATSQGRVVLHSGTMAMGQGLQTTYTQMIADTLGIAMDKIDVVQGDTDLAMGFGSV 607 Query: 541 GSRSLFVGGTAV 552 GSRSLFVGGTAV Sbjct: 608 GSRSLFVGGTAV 619 >ref|ZP_08627666.1| carbon monoxide dehydrogenase large chain [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09570.1| carbon monoxide dehydrogenase large chain [Bradyrhizobiaceae bacterium SG-6C] Length = 776 Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/551 (79%), Positives = 483/551 (87%) Query: 1 MNILPGNMRFGAGQPVKRLEDQRLVTGKGHFIDDKPQDGALWLHVLRSPHAHANIKSIDA 60 MNILP N+RFGAGQ VKRLEDQRL+TG+GHF+DDKPQDG LWL+VLRSPHAHA IK+ID Sbjct: 1 MNILPANLRFGAGQSVKRLEDQRLLTGQGHFVDDKPQDGGLWLYVLRSPHAHARIKAIDT 60 Query: 61 KTALEMPGVKAVYTGADLVKDDIGTLPTLAIFKRPDGSPMTVPPRRLLAHEVVRYAGEGV 120 AL M GV AVYTGADLV D+IGT+PTL IFKRPDGSPM PPRRLLAHE+VR+AGE V Sbjct: 61 SAALAMEGVAAVYTGADLVADNIGTIPTLPIFKRPDGSPMQAPPRRLLAHEIVRFAGEPV 120 Query: 121 AAVVATSRVLAQTAAEAIEIDYEVLPSVVDPVEAIKPGAPAVWPEAPDNIVAAMSYGDAA 180 AAV+A SR AQTAAEAI IDYE+LP+VV P +A+ PGAP VWP+APDNI A+MSYGDA Sbjct: 121 AAVLAASRADAQTAAEAIAIDYEILPAVVAPADALAPGAPVVWPDAPDNIAASMSYGDAT 180 Query: 181 KVEEAFANAAHKVSLDLVSQRLVPSAMEPRSTIAEIEKKTGRLILHVQSQTPGSTRDLLA 240 E AFA A H VSLDL SQRLVPSA+EPRST+AE++KKTGRL LHVQSQTP +TRD+LA Sbjct: 181 ATEAAFAKAKHVVSLDLTSQRLVPSALEPRSTMAELDKKTGRLSLHVQSQTPTATRDILA 240 Query: 241 ESILKRPKDSVRVLVGDIGGGFGQKTSLYPEDGIVAYAATKLNEKIRWRGDRTDEFVGGT 300 + +LKRPKDSV VLVGDIGGGFG K +LYPEDGIVAYAA KL +RWRGDR D+FVGG Sbjct: 241 DVVLKRPKDSVHVLVGDIGGGFGHKVNLYPEDGIVAYAAQKLKRTVRWRGDRLDDFVGGH 300 Query: 301 HGRDLTSTGEFALDAKGRVLAYRVRSIGGTGAYSSGTANIIPLVLGPFVQTGVYDLPLVH 360 HGRDLTSTGEFALD KGRVLA+RVRS+GG GAY +G IIPLVLGPFV TGVYDLPL+H Sbjct: 301 HGRDLTSTGEFALDEKGRVLAFRVRSLGGVGAYLTGAGVIIPLVLGPFVATGVYDLPLIH 360 Query: 361 FEVKSVMTHTAPVGAYRGAGRPEAVFIVERLFDAAARQIGMDPRTIRKVNYIKPAQLPYT 420 F++K+V+THTAP G YRGAGRPEAVFIVERL DAAARQIGMDPR IRKVNYIKP+QLPY Sbjct: 361 FDIKAVLTHTAPTGPYRGAGRPEAVFIVERLMDAAARQIGMDPRQIRKVNYIKPSQLPYK 420 Query: 421 NAVGQVYDSGAFAHMLERASDLADWNGFAARKKAAKKKGLLYGRGLTSYIEWTGGRAHTE 480 NAVG+ YDSGAFAHMLERAS LADW+GF ARKKAAKKKGLLYGRGLTSYIEWTGGR HTE Sbjct: 421 NAVGETYDSGAFAHMLERASKLADWDGFNARKKAAKKKGLLYGRGLTSYIEWTGGRVHTE 480 Query: 481 KVSLHATAEGRVILWSGTMAMGQGLATTYTQMVADTLGISMDKIDVVQGDTDLATGFGSV 540 KV+LHATAEGRVIL SGT AMGQGL T+Y+QMVA LGI +D+IDV+QGDTD ATG GSV Sbjct: 481 KVTLHATAEGRVILQSGTQAMGQGLQTSYSQMVAGALGIPLDRIDVIQGDTDKATGGGSV 540 Query: 541 GSRSLFVGGTA 551 GSRSLFVGGTA Sbjct: 541 GSRSLFVGGTA 551 >ref|YP_487561.1| carbon-monoxide dehydrogenase [Rhodopseudomonas palustris HaA2] gb|ABD08650.1| Carbon-monoxide dehydrogenase [Rhodopseudomonas palustris HaA2] Length = 776 Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/553 (79%), Positives = 496/553 (89%) Query: 1 MNILPGNMRFGAGQPVKRLEDQRLVTGKGHFIDDKPQDGALWLHVLRSPHAHANIKSIDA 60 MNILPG+MRFGAGQPVKRLEDQRLVTG GH++DDKP DGALWL VLRSPHAHA I SIDA Sbjct: 1 MNILPGSMRFGAGQPVKRLEDQRLVTGHGHYLDDKPADGALWLVVLRSPHAHAKIVSIDA 60 Query: 61 KTALEMPGVKAVYTGADLVKDDIGTLPTLAIFKRPDGSPMTVPPRRLLAHEVVRYAGEGV 120 + A MPGV++V TGADLV D+IGT+PTL IFKRPDGSPM +PPRRLLAHE+VR+ GE V Sbjct: 61 EAARAMPGVESVLTGADLVADEIGTIPTLPIFKRPDGSPMLLPPRRLLAHEIVRFVGEPV 120 Query: 121 AAVVATSRVLAQTAAEAIEIDYEVLPSVVDPVEAIKPGAPAVWPEAPDNIVAAMSYGDAA 180 AAV+A S+ AQ AAEA+ ++YE LP+V DPV AI+PGAP V APDNIVAAMSYGDAA Sbjct: 121 AAVIAASQAAAQAAAEAVVVEYEELPAVTDPVAAIQPGAPVVVETAPDNIVAAMSYGDAA 180 Query: 181 KVEEAFANAAHKVSLDLVSQRLVPSAMEPRSTIAEIEKKTGRLILHVQSQTPGSTRDLLA 240 KV+EAFA+AAH VSLD+VSQRL+PSAMEPR+TIAEIEKKTGRLILHVQSQTP TRD LA Sbjct: 181 KVDEAFASAAHTVSLDIVSQRLIPSAMEPRATIAEIEKKTGRLILHVQSQTPAQTRDALA 240 Query: 241 ESILKRPKDSVRVLVGDIGGGFGQKTSLYPEDGIVAYAATKLNEKIRWRGDRTDEFVGGT 300 ++ILKRPK+S++VLVGDIGGGFGQKT +YPED +VAYAA KLN+KIRWRGDRTDEFVGGT Sbjct: 241 DAILKRPKESIQVLVGDIGGGFGQKTGVYPEDALVAYAAVKLNKKIRWRGDRTDEFVGGT 300 Query: 301 HGRDLTSTGEFALDAKGRVLAYRVRSIGGTGAYSSGTANIIPLVLGPFVQTGVYDLPLVH 360 HGRDLTST ALDAKGRVLAYRV SIGGTGAY +G IIPLVLGPFVQTGVYDLPLVH Sbjct: 301 HGRDLTSTASIALDAKGRVLAYRVSSIGGTGAYLAGAGVIIPLVLGPFVQTGVYDLPLVH 360 Query: 361 FEVKSVMTHTAPVGAYRGAGRPEAVFIVERLFDAAARQIGMDPRTIRKVNYIKPAQLPYT 420 F++K+VMTHTAPVGAYRGAGRPEAV+I+ERL DAAARQ+ MDPR IRKVNYIKP QLPYT Sbjct: 361 FDIKAVMTHTAPVGAYRGAGRPEAVYIIERLMDAAARQLNMDPRAIRKVNYIKPTQLPYT 420 Query: 421 NAVGQVYDSGAFAHMLERASDLADWNGFAARKKAAKKKGLLYGRGLTSYIEWTGGRAHTE 480 NAVGQVYDSGAFAH+++RA++L+DW+GF ARKK A+KKGLLYGRG+TSYIEWTGGRAHTE Sbjct: 421 NAVGQVYDSGAFAHLMQRATELSDWDGFKARKKEAQKKGLLYGRGVTSYIEWTGGRAHTE 480 Query: 481 KVSLHATAEGRVILWSGTMAMGQGLATTYTQMVADTLGISMDKIDVVQGDTDLATGFGSV 540 KVSLHATAEGR++L SGT AMGQGL TTY+QM+A L I ++ IDVVQG+TDLA GFGSV Sbjct: 481 KVSLHATAEGRIVLHSGTQAMGQGLETTYSQMIAQALDIPIESIDVVQGNTDLAQGFGSV 540 Query: 541 GSRSLFVGGTAVC 553 GSRSLFVGGTAV Sbjct: 541 GSRSLFVGGTAVA 553