BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0223.0021.p (232 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001206661.1| ribose-5-phosphate isomerase A [Bradyrhizobi... 375 e-102 ref|NP_770395.1| ribose-5-phosphate isomerase A [Bradyrhizobium ... 374 e-102 ref|ZP_08629363.1| ribose 5-phosphate isomerase A [Bradyrhizobia... 372 e-101 ref|YP_780911.1| ribose-5-phosphate isomerase A [Rhodopseudomona... 364 7e-99 ref|YP_001239482.1| ribose-5-phosphate isomerase A [Bradyrhizobi... 360 1e-97 >ref|YP_001206661.1| ribose-5-phosphate isomerase A [Bradyrhizobium sp. ORS 278] emb|CAL78444.1| ribose 5-phosphate isomerase (Phosphoriboisomerase A) (PRI) [Bradyrhizobium sp. ORS 278] Length = 230 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 188/230 (81%), Positives = 205/230 (89%) Query: 3 MDALKRQAAARALEEVRDGMKLGLGTGSTAKHFVELLGEKVRAGMKVIGVPTSEATRADA 62 MDALKRQAAARALEEV GMKLGLGTGSTAKHFV+LLGEKVRAG+KV+GVPTSEATRA A Sbjct: 1 MDALKRQAAARALEEVESGMKLGLGTGSTAKHFVDLLGEKVRAGLKVVGVPTSEATRAQA 60 Query: 63 IRCGVPLTTLDEIDHLDLTIDGADEIDPALNLIKGGGGALLREKIVAAASDRMIVIADDS 122 CGVPLTTLDEID LD+TIDGADEI+PAL+LIKGGGGALLREKIVA+AS+RMIVIADDS Sbjct: 61 EACGVPLTTLDEIDRLDITIDGADEINPALDLIKGGGGALLREKIVASASNRMIVIADDS 120 Query: 123 KWVDVLGRFPLPVEVIPFGLAATQAAMARAFAKASVSGEMLIRKGKDGHVFVTDGGHWIV 182 KWV LGRFPLP+EV+PFG+AATQ +A AF KA V+G M +RK DGHVFVTDGGHWIV Sbjct: 121 KWVARLGRFPLPIEVVPFGIAATQREIADAFTKAGVAGPMSLRKSADGHVFVTDGGHWIV 180 Query: 183 DAHLGRIGDPPRLAGLLSVIPGVVEHGLFIGLGSVAVLAGAQGIRVVERP 232 D LG I DPPRLA LS IPGVVEHGLFIGLGS A+LAGAQGIRV++RP Sbjct: 181 DVRLGEIEDPPRLASFLSAIPGVVEHGLFIGLGSTAILAGAQGIRVIQRP 230 >ref|NP_770395.1| ribose-5-phosphate isomerase A [Bradyrhizobium japonicum USDA 110] sp|Q89NS9.1|RPIA_BRAJA RecName: Full=Ribose-5-phosphate isomerase A; AltName: Full=Phosphoriboisomerase A; Short=PRI dbj|BAC49020.1| ribose 5-phosphate isomerase [Bradyrhizobium japonicum USDA 110] Length = 241 Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust. Identities = 190/235 (80%), Positives = 207/235 (88%), Gaps = 4/235 (1%) Query: 1 VDMDALKRQAAARALEEVRDGMKLGLGTGSTAKHFVELLGEKVRAGMKVIGVPTSEATRA 60 ++MD LKRQAAARALEEVRDGM+LGLGTGSTAKHFVELLGE+V AG+KVIGVPTSEATR Sbjct: 1 MNMDQLKRQAAARALEEVRDGMQLGLGTGSTAKHFVELLGERVAAGLKVIGVPTSEATRL 60 Query: 61 DAIRCGVPLTTLDEIDHLDLTIDGADEIDPALNLIKGGGGALLREKIVAAASDRMIVIAD 120 DA RCGVPLTTLDEIDHLD+T+DGADEIDP LNLIKGGGGALLREKIVAAASDRMIVIAD Sbjct: 61 DATRCGVPLTTLDEIDHLDITVDGADEIDPELNLIKGGGGALLREKIVAAASDRMIVIAD 120 Query: 121 DSKWVDVLGRFPLPVEVIPFGLAATQAAMARAFAKASVSGEMLIRKG----KDGHVFVTD 176 D+KWV LGRFPLP+EVIPFGL AT+ A+ AFA+ VSG+M +RK KDGHVFVTD Sbjct: 121 DTKWVPTLGRFPLPIEVIPFGLGATRRAIETAFAQCGVSGQMAVRKAKGGDKDGHVFVTD 180 Query: 177 GGHWIVDAHLGRIGDPPRLAGLLSVIPGVVEHGLFIGLGSVAVLAGAQGIRVVER 231 GGHWI+DA LGRI DPP LA LS IPGVVEHGLFIGL S AVLAG +GIRV+ER Sbjct: 181 GGHWILDAQLGRIVDPPSLAKALSAIPGVVEHGLFIGLASSAVLAGGEGIRVIER 235 >ref|ZP_08629363.1| ribose 5-phosphate isomerase A [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07856.1| ribose 5-phosphate isomerase A [Bradyrhizobiaceae bacterium SG-6C] Length = 233 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 187/232 (80%), Positives = 207/232 (89%) Query: 1 VDMDALKRQAAARALEEVRDGMKLGLGTGSTAKHFVELLGEKVRAGMKVIGVPTSEATRA 60 + MD LKRQAAARALE+V+DGMKLGLGTGSTAKHFVELLGE+V+AG+KV+GVPTSEATRA Sbjct: 2 MSMDDLKRQAAARALEQVQDGMKLGLGTGSTAKHFVELLGERVKAGLKVVGVPTSEATRA 61 Query: 61 DAIRCGVPLTTLDEIDHLDLTIDGADEIDPALNLIKGGGGALLREKIVAAASDRMIVIAD 120 DA RCGVPLTTL+++D LDLT+DGADE+DP L LIKGGGGALLREKIVAAASDRMIVIAD Sbjct: 62 DAERCGVPLTTLEDVDRLDLTVDGADEVDPHLELIKGGGGALLREKIVAAASDRMIVIAD 121 Query: 121 DSKWVDVLGRFPLPVEVIPFGLAATQAAMARAFAKASVSGEMLIRKGKDGHVFVTDGGHW 180 DSKWVD LGRFPLP+EVIPFGL AT+ A+ AFA+ VSG M IRK KDGHVFVTDGGHW Sbjct: 122 DSKWVDALGRFPLPIEVIPFGLGATRRAIEAAFAQNGVSGPMDIRKTKDGHVFVTDGGHW 181 Query: 181 IVDAHLGRIGDPPRLAGLLSVIPGVVEHGLFIGLGSVAVLAGAQGIRVVERP 232 I+DA LGRI DPP+LA L+ IPGVVEHGLFIGL VLAGAQGIRVV+RP Sbjct: 182 IIDARLGRIPDPPKLAASLNSIPGVVEHGLFIGLARTVVLAGAQGIRVVDRP 233 >ref|YP_780911.1| ribose-5-phosphate isomerase A [Rhodopseudomonas palustris BisA53] sp|Q07Q53.1|RPIA_RHOP5 RecName: Full=Ribose-5-phosphate isomerase A; AltName: Full=Phosphoriboisomerase A; Short=PRI gb|ABJ05931.1| ribose-5-phosphate isomerase [Rhodopseudomonas palustris BisA53] Length = 241 Score = 364 bits (934), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 181/229 (79%), Positives = 201/229 (87%) Query: 4 DALKRQAAARALEEVRDGMKLGLGTGSTAKHFVELLGEKVRAGMKVIGVPTSEATRADAI 63 D LKRQAAA ALE+VRDGMKLGLGTGSTAKHFVELLG KV+ G++V+GVPTSE TRADA Sbjct: 4 DELKRQAAAVALEQVRDGMKLGLGTGSTAKHFVELLGAKVQGGLQVVGVPTSEVTRADAE 63 Query: 64 RCGVPLTTLDEIDHLDLTIDGADEIDPALNLIKGGGGALLREKIVAAASDRMIVIADDSK 123 RCG+PL TLDE+DHLDLT+DGADEIDPALNL+KGGGGALLREKIVAAAS RMIVIADDSK Sbjct: 64 RCGIPLATLDEVDHLDLTVDGADEIDPALNLVKGGGGALLREKIVAAASGRMIVIADDSK 123 Query: 124 WVDVLGRFPLPVEVIPFGLAATQAAMARAFAKASVSGEMLIRKGKDGHVFVTDGGHWIVD 183 V+ LGRFPLP+EVIPFGLAAT+ A+ +A A + GE+ +R GKDGH FVTDGGHWIVD Sbjct: 124 LVETLGRFPLPIEVIPFGLAATRRAIEQALAVCGIDGELKLRNGKDGHAFVTDGGHWIVD 183 Query: 184 AHLGRIGDPPRLAGLLSVIPGVVEHGLFIGLGSVAVLAGAQGIRVVERP 232 AHLGRI D PRLAGLLSVIPG+VEHGLFIGL S VLA GIR++ERP Sbjct: 184 AHLGRIPDAPRLAGLLSVIPGIVEHGLFIGLASSVVLASPHGIRIIERP 232 >ref|YP_001239482.1| ribose-5-phosphate isomerase A [Bradyrhizobium sp. BTAi1] gb|ABQ35576.1| ribose-5-phosphate isomerase [Bradyrhizobium sp. BTAi1] Length = 230 Score = 360 bits (923), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 193/230 (83%), Positives = 209/230 (90%) Query: 3 MDALKRQAAARALEEVRDGMKLGLGTGSTAKHFVELLGEKVRAGMKVIGVPTSEATRADA 62 MDALKRQAAA AL EV GMKLGLGTGSTAKHFV+LLGEKVRAG+KV+GVPTSEATRA A Sbjct: 1 MDALKRQAAAHALREVESGMKLGLGTGSTAKHFVDLLGEKVRAGLKVVGVPTSEATRAQA 60 Query: 63 IRCGVPLTTLDEIDHLDLTIDGADEIDPALNLIKGGGGALLREKIVAAASDRMIVIADDS 122 CGVPLTTLDEIDHLDLT+DGADEI+PAL+LIKGGGGALLREKIVA+ASDRMIVIAD+S Sbjct: 61 EACGVPLTTLDEIDHLDLTVDGADEINPALDLIKGGGGALLREKIVASASDRMIVIADES 120 Query: 123 KWVDVLGRFPLPVEVIPFGLAATQAAMARAFAKASVSGEMLIRKGKDGHVFVTDGGHWIV 182 KWV LGRFPLP+EVIPFGLAAT+ A+A AFAKA VSG+M +RK DGHVFVTDGGHWIV Sbjct: 121 KWVARLGRFPLPIEVIPFGLAATRHAIAAAFAKAGVSGQMDLRKSADGHVFVTDGGHWIV 180 Query: 183 DAHLGRIGDPPRLAGLLSVIPGVVEHGLFIGLGSVAVLAGAQGIRVVERP 232 D LG I DPPRLAGLLS IPGVVEHGLFIGLGS A+LAGAQGIRV++RP Sbjct: 181 DVRLGEIEDPPRLAGLLSAIPGVVEHGLFIGLGSTAILAGAQGIRVIQRP 230