BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0223.0020.p         (177 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08629364.1| hypothetical protein CSIRO_2452 [Bradyrhizobi...   211   4e-53
ref|ZP_01046381.1| hypothetical protein NB311A_12764 [Nitrobacte...   210   6e-53
ref|YP_317836.1| hypothetical protein Nwi_1222 [Nitrobacter wino...   207   3e-52
ref|YP_780912.1| hypothetical protein RPE_1988 [Rhodopseudomonas...   207   4e-52
ref|YP_576763.1| hypothetical protein Nham_1481 [Nitrobacter ham...   202   2e-50

>ref|ZP_08629364.1| hypothetical protein CSIRO_2452 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07857.1| hypothetical protein CSIRO_2452 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 168

 Score =  211 bits (537), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 107/177 (60%), Positives = 131/177 (74%), Gaps = 9/177 (5%)

Query: 1   MKRFSGLLSAAALAAGLALAPAMAQQPQLPAMPKDVKQSTPAAIGYAKEILTMKNVAVMY 60
           MK+FS +L A   A  L +  AMAQ P+ P         +PAAIGYAKEIL  KNV+ +Y
Sbjct: 1   MKKFSHVLFAVGAALVLTMGSAMAQAPKPP---------SPAAIGYAKEILASKNVSAIY 51

Query: 61  AGAVPGIIEKTKTGLLQQYLNYQKDLNEVALVVAKNLAGSEKEIGEGMAQLYAAEFTEQE 120
            GAVPG++++TK  LLQ  LNYQKDLNEVA+VVAK LAG EKEIGE MA++YA+ FTEQE
Sbjct: 52  QGAVPGLVQRTKDVLLQSNLNYQKDLNEVAVVVAKELAGREKEIGEEMARIYASSFTEQE 111

Query: 121 LKDLVIFYKTPLGQKLLTSEPKAINDSLQYMQQWAQQFGVIVNAQFKAEMKKRGKDI 177
           LK+L  FYK+PLG K++  EP A   + QYM QWAQ+FG  +NA+F+AEMKKRGKDI
Sbjct: 112 LKELAAFYKSPLGAKVIAQEPVAFTTARQYMDQWAQKFGEEINAKFRAEMKKRGKDI 168


>ref|ZP_01046381.1| hypothetical protein NB311A_12764 [Nitrobacter sp. Nb-311A]
 gb|EAQ35695.1| hypothetical protein NB311A_12764 [Nitrobacter sp. Nb-311A]
          Length = 155

 Score =  210 bits (535), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 101/151 (66%), Positives = 124/151 (82%), Gaps = 2/151 (1%)

Query: 29  LPAMPKDVK--QSTPAAIGYAKEILTMKNVAVMYAGAVPGIIEKTKTGLLQQYLNYQKDL 86
           +PA+ +  K  Q TPAAI  AKE+LT+K+   MYA AVP ++E+TK  LLQ  LNYQKDL
Sbjct: 5   IPALAQAQKAGQPTPAAIASAKELLTLKHAGAMYANAVPSMVERTKNTLLQSNLNYQKDL 64

Query: 87  NEVALVVAKNLAGSEKEIGEGMAQLYAAEFTEQELKDLVIFYKTPLGQKLLTSEPKAIND 146
           NEVALVVAK+LAG EKEIG+GMA++YA+ FTEQELKDLV FYK+ LGQKL+T EPKAI +
Sbjct: 65  NEVALVVAKSLAGREKEIGDGMAKVYASHFTEQELKDLVTFYKSTLGQKLITQEPKAIEE 124

Query: 147 SLQYMQQWAQQFGVIVNAQFKAEMKKRGKDI 177
           S++YM QWAQQF  +VN QF+AEM+KRGK+I
Sbjct: 125 SMKYMNQWAQQFADVVNGQFRAEMRKRGKEI 155


>ref|YP_317836.1| hypothetical protein Nwi_1222 [Nitrobacter winogradskyi Nb-255]
 gb|ABA04484.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 174

 Score =  207 bits (528), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 98/138 (71%), Positives = 116/138 (84%)

Query: 40  TPAAIGYAKEILTMKNVAVMYAGAVPGIIEKTKTGLLQQYLNYQKDLNEVALVVAKNLAG 99
           +PAAI  AKE+LT+KN A MYA AVPGI+E+TK  LLQ  LNYQKDLNEVALVVAK+LAG
Sbjct: 37  SPAAIASAKELLTLKNAAGMYANAVPGIVERTKNTLLQSNLNYQKDLNEVALVVAKSLAG 96

Query: 100 SEKEIGEGMAQLYAAEFTEQELKDLVIFYKTPLGQKLLTSEPKAINDSLQYMQQWAQQFG 159
            EKEIG+GMA++YA  FTEQELKDLV FYK+PLG+KL+  EPKAI  S+ YM QWAQQF 
Sbjct: 97  REKEIGDGMAKIYAGHFTEQELKDLVTFYKSPLGKKLIAQEPKAIEASMGYMNQWAQQFA 156

Query: 160 VIVNAQFKAEMKKRGKDI 177
            +VN +F+AEM+KRGK+I
Sbjct: 157 SVVNGEFRAEMRKRGKEI 174


>ref|YP_780912.1| hypothetical protein RPE_1988 [Rhodopseudomonas palustris BisA53]
 gb|ABJ05932.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 173

 Score =  207 bits (528), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 103/177 (58%), Positives = 136/177 (76%), Gaps = 4/177 (2%)

Query: 1   MKRFSGLLSAAALAAGLALAPAMAQQPQLPAMPKDVKQSTPAAIGYAKEILTMKNVAVMY 60
           MK+F+ L+    +AAG+AL  +M+        P  +K  TPAAI  AKEIL MKNV+ MY
Sbjct: 1   MKKFANLV----VAAGIALGLSMSAAHAQAPAPAPLKPGTPAAIAAAKEILAMKNVSAMY 56

Query: 61  AGAVPGIIEKTKTGLLQQYLNYQKDLNEVALVVAKNLAGSEKEIGEGMAQLYAAEFTEQE 120
           A AVP I+++TK  LLQ  LNYQKDLNEVA++VA+ +AG EK+IGE MA++YA++FTEQE
Sbjct: 57  ASAVPNIVQRTKDTLLQNNLNYQKDLNEVAVIVAQAMAGREKDIGEQMAKIYASDFTEQE 116

Query: 121 LKDLVIFYKTPLGQKLLTSEPKAINDSLQYMQQWAQQFGVIVNAQFKAEMKKRGKDI 177
           LK++V FYKTP+GQK+L++EPK+I  S+QYM QWAQ F   VN +F+AEM+KRGK+I
Sbjct: 117 LKEIVAFYKTPVGQKMLSTEPKSIAASMQYMNQWAQAFAEEVNGKFRAEMRKRGKEI 173


>ref|YP_576763.1| hypothetical protein Nham_1481 [Nitrobacter hamburgensis X14]
 gb|ABE62303.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 169

 Score =  202 bits (514), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 94/140 (67%), Positives = 114/140 (81%)

Query: 38  QSTPAAIGYAKEILTMKNVAVMYAGAVPGIIEKTKTGLLQQYLNYQKDLNEVALVVAKNL 97
           Q T AAI  A+E+LT+K+   MYA AVPG++E+TKT LLQ  LNYQKDLNEVAL+VAK+L
Sbjct: 30  QPTAAAIASARELLTLKHADAMYANAVPGMVERTKTTLLQSNLNYQKDLNEVALIVAKSL 89

Query: 98  AGSEKEIGEGMAQLYAAEFTEQELKDLVIFYKTPLGQKLLTSEPKAINDSLQYMQQWAQQ 157
           AG EKEIG+GMA++YA  FTEQELKDLV FYK+PLGQKL+  EPKAI  S+ +M QWA Q
Sbjct: 90  AGREKEIGDGMAKIYAGHFTEQELKDLVTFYKSPLGQKLIAQEPKAIEASMGFMNQWAHQ 149

Query: 158 FGVIVNAQFKAEMKKRGKDI 177
           F  +VN  F+AEM+KRGK+I
Sbjct: 150 FADVVNGAFRAEMRKRGKEI 169