BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0223.0014.p         (207 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_780914.1| hypothetical protein RPE_1990 [Rhodopseudomonas...   133   2e-29
ref|YP_531952.1| hypothetical protein RPC_2079 [Rhodopseudomonas...   126   2e-27
ref|NP_770417.1| hypothetical protein bll3777 [Bradyrhizobium ja...   118   6e-25
ref|YP_001779481.1| alpha/beta hydrolase-like protein [Burkholde...    75   8e-12
ref|ZP_04941687.1| hypothetical protein BCPG_03197 [Burkholderia...    74   9e-12

>ref|YP_780914.1| hypothetical protein RPE_1990 [Rhodopseudomonas palustris BisA53]
 gb|ABJ05934.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisA53]
          Length = 299

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/84 (78%), Positives = 73/84 (86%)

Query: 4  AALDDVFSDDIVVPAADGYPLAATLFLPRGTRRHAVLINSATAVPRKVYRGFAGYLARRG 63
          AALDDVFSDDI  PA DG+ LAATL+LPRG +R+AVLINSATAVPRK+YRGFA YLA+RG
Sbjct: 2  AALDDVFSDDITFPATDGFALAATLYLPRGAKRNAVLINSATAVPRKIYRGFASYLAKRG 61

Query: 64 AAVLTYDYRGTGDSRPMAAAGRLQ 87
          +AVLTYDYRGTG SRP A  G LQ
Sbjct: 62 SAVLTYDYRGTGGSRPPAGRGYLQ 85


>ref|YP_531952.1| hypothetical protein RPC_2079 [Rhodopseudomonas palustris BisB18]
 gb|ABD87633.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisB18]
          Length = 301

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/75 (81%), Positives = 67/75 (89%)

Query: 4  AALDDVFSDDIVVPAADGYPLAATLFLPRGTRRHAVLINSATAVPRKVYRGFAGYLARRG 63
          AA DDVFSDDI  PA DG+ LAATL+LPRG ++HAVLINSATAVPRK+YRGFA YLARRG
Sbjct: 2  AAPDDVFSDDITFPATDGFVLAATLYLPRGAKKHAVLINSATAVPRKIYRGFASYLARRG 61

Query: 64 AAVLTYDYRGTGDSR 78
          +AVLTYDYRGTG SR
Sbjct: 62 SAVLTYDYRGTGGSR 76


>ref|NP_770417.1| hypothetical protein bll3777 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49042.1| bll3777 [Bradyrhizobium japonicum USDA 110]
          Length = 298

 Score =  118 bits (295), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 60/84 (71%), Positives = 64/84 (76%)

Query: 4  AALDDVFSDDIVVPAADGYPLAATLFLPRGTRRHAVLINSATAVPRKVYRGFAGYLARRG 63
          AA DDVF D+I  PA DGY L+ TLFLPR  +RHAVLINSATAVPRK+YRGFA YLA RG
Sbjct: 3  AARDDVFIDEISFPATDGYALSGTLFLPRAAKRHAVLINSATAVPRKIYRGFASYLAHRG 62

Query: 64 AAVLTYDYRGTGDSRPMAAAGRLQ 87
           AVLTYDYRG G SR  A  G  Q
Sbjct: 63 CAVLTYDYRGIGGSRLPAMVGYNQ 86


>ref|YP_001779481.1| alpha/beta hydrolase-like protein [Burkholderia cenocepacia
          MC0-3]
 gb|ACA94991.1| alpha/beta hydrolase-like protein [Burkholderia cenocepacia
          MC0-3]
          Length = 305

 Score = 74.7 bits (182), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 46/69 (66%)

Query: 11 SDDIVVPAADGYPLAATLFLPRGTRRHAVLINSATAVPRKVYRGFAGYLARRGAAVLTYD 70
          S+ I   AADGY L  TL+ P  T R  VLI+ ATAVP ++Y GFA +L  RG A LTYD
Sbjct: 3  SEPIEFSAADGYVLHGTLWSPDATPRALVLIHPATAVPERLYAGFARFLTERGFAALTYD 62

Query: 71 YRGTGDSRP 79
          YRG G SRP
Sbjct: 63 YRGIGASRP 71


>ref|ZP_04941687.1| hypothetical protein BCPG_03197 [Burkholderia cenocepacia PC184]
 gb|EAY64858.1| hypothetical protein BCPG_03197 [Burkholderia cenocepacia PC184]
          Length = 348

 Score = 74.3 bits (181), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 46/69 (66%)

Query: 11  SDDIVVPAADGYPLAATLFLPRGTRRHAVLINSATAVPRKVYRGFAGYLARRGAAVLTYD 70
           S+ I   AADGY L  TL+ P  T R  VLI+ ATAVP ++Y GFA +L  RG A LTYD
Sbjct: 46  SEPIEFSAADGYVLHGTLWSPDATPRALVLIHPATAVPERLYAGFARFLTERGFAALTYD 105

Query: 71  YRGTGDSRP 79
           YRG G SRP
Sbjct: 106 YRGIGASRP 114