BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0223.0013.p (462 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770418.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Br... 900 0.0 ref|ZP_08629366.1| 2-keto-3-deoxy-D-arabino-heptulosonate-7-phos... 897 0.0 ref|YP_001206651.1| 3-deoxy-7-phosphoheptulonate synthase [Brady... 877 0.0 ref|YP_001239492.1| 3-deoxy-D-arabinoheptulosonate-7-phosphate s... 877 0.0 ref|YP_002289500.1| 3-deoxy-7-phosphoheptulonate synthase [Oligo... 871 0.0 >ref|NP_770418.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Bradyrhizobium japonicum USDA 110] dbj|BAC49043.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Bradyrhizobium japonicum USDA 110] Length = 462 Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/462 (92%), Positives = 447/462 (96%) Query: 1 MSERWTPDSWRAKKVLQVPDYPDAKALADVEAQLATFPPLVFAGEARRGAKAKGRVAAGE 60 MSERWTP+SWR+K VLQVPDYPDAKALADVEAQLATFPPLVFAGEAR KA GRVAAGE Sbjct: 1 MSERWTPESWRSKPVLQVPDYPDAKALADVEAQLATFPPLVFAGEARNLKKALGRVAAGE 60 Query: 61 AFLLQGGDCAESFAEHGANNIRDFFRVFLQMAVVLTYAGALPVVKVGRIAGQFAKPRSSP 120 AFLLQGGDCAESFAEHGANNIRDFFRV LQMAVVLTYAGA+PVVKVGRIAGQFAKPRSSP Sbjct: 61 AFLLQGGDCAESFAEHGANNIRDFFRVLLQMAVVLTYAGAVPVVKVGRIAGQFAKPRSSP 120 Query: 121 TEKQGDVELPSYRGDIVNDIAFTPEARIPDPQRQLMAYRQSAATLNLLRAFATGGFANLG 180 TEK G VELPSYRGDIVNDIAFT EAR+PDPQRQLMAYRQSAATLNLLRAFATGG+ANLG Sbjct: 121 TEKVGGVELPSYRGDIVNDIAFTKEARVPDPQRQLMAYRQSAATLNLLRAFATGGYANLG 180 Query: 181 SVHQWMLGFLKDSPQSRRYKELADRISDALNFMRACGLDLESHPELRATDFYTSHEALLL 240 SVH+WMLGFLKDSPQSRRYKELADRISDALNFMRACGLDLESHPELRATDFYTSHEALLL Sbjct: 181 SVHEWMLGFLKDSPQSRRYKELADRISDALNFMRACGLDLESHPELRATDFYTSHEALLL 240 Query: 241 GYEQAMTRVDSTTGDWYATSGHMIWIGDRTRQLDHGHVEYFRGIKNPIGLKCGPSLKPDE 300 GYEQAMTR+DSTTGDWYATSGHMIWIGDRTRQLDHGH+EYFRGIKNPIGLKCGPSLKPDE Sbjct: 241 GYEQAMTRIDSTTGDWYATSGHMIWIGDRTRQLDHGHIEYFRGIKNPIGLKCGPSLKPDE 300 Query: 301 LLKLIDILNPEDEPGRLTLINRFGADKVGDHLPGLIRAVQREGRRVVWSCDPMHGNTITS 360 LLKLID+LNP++EPGRLTLI RFG+DKVG+HLP +IRAV+REGR VVWSCDPMHGNTITS Sbjct: 301 LLKLIDVLNPDNEPGRLTLIGRFGSDKVGEHLPNMIRAVKREGRVVVWSCDPMHGNTITS 360 Query: 361 TSGYKTRPFDRVLSEVRSFFQIHAAEGTHAGGVHLEMTGQDVTECIGGARAITDEDLNDR 420 TSGYKTRPFDR+LSEV+SFF IHAAEGTHAGGVHLEMTGQDVTEC+GGARAITDEDLNDR Sbjct: 361 TSGYKTRPFDRILSEVKSFFAIHAAEGTHAGGVHLEMTGQDVTECLGGARAITDEDLNDR 420 Query: 421 YHTVCDPRLNAEQSIDMAFLIAELLKQERAGKVKPMPAAAGL 462 YHTVCDPRLNAEQSIDMAFL+AELLKQERAGK +PMP AAGL Sbjct: 421 YHTVCDPRLNAEQSIDMAFLVAELLKQERAGKARPMPVAAGL 462 >ref|ZP_08629366.1| 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07859.1| 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II [Bradyrhizobiaceae bacterium SG-6C] Length = 462 Score = 897 bits (2318), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/462 (92%), Positives = 441/462 (95%) Query: 1 MSERWTPDSWRAKKVLQVPDYPDAKALADVEAQLATFPPLVFAGEARRGAKAKGRVAAGE 60 MSERWTPDSWR K V+QVP+YPDAKALADVEAQLATFPPLVFAGEAR KA RVA GE Sbjct: 1 MSERWTPDSWRKKPVMQVPEYPDAKALADVEAQLATFPPLVFAGEARNLKKALARVANGE 60 Query: 61 AFLLQGGDCAESFAEHGANNIRDFFRVFLQMAVVLTYAGALPVVKVGRIAGQFAKPRSSP 120 AFLLQGGDCAESFAEHGANNIRDFFRV LQMAVVLTYAGALPVVKVGRIAGQFAKPRSSP Sbjct: 61 AFLLQGGDCAESFAEHGANNIRDFFRVLLQMAVVLTYAGALPVVKVGRIAGQFAKPRSSP 120 Query: 121 TEKQGDVELPSYRGDIVNDIAFTPEARIPDPQRQLMAYRQSAATLNLLRAFATGGFANLG 180 EKQGD+ELPSYRGDIVND AFT EAR PDPQRQLMAYRQSAATLNLLRAFATGGFANLG Sbjct: 121 MEKQGDIELPSYRGDIVNDTAFTKEARTPDPQRQLMAYRQSAATLNLLRAFATGGFANLG 180 Query: 181 SVHQWMLGFLKDSPQSRRYKELADRISDALNFMRACGLDLESHPELRATDFYTSHEALLL 240 SVHQWMLGFLKDSPQSRRYKELADRIS+ALNFMRACGLDLESHPELRATDFYTSHEALLL Sbjct: 181 SVHQWMLGFLKDSPQSRRYKELADRISEALNFMRACGLDLESHPELRATDFYTSHEALLL 240 Query: 241 GYEQAMTRVDSTTGDWYATSGHMIWIGDRTRQLDHGHVEYFRGIKNPIGLKCGPSLKPDE 300 GYEQA TRVDSTTGDWYAT+GHMIWIGDRTRQLDHGH+EYFRGIKNPIGLKCGPSLKPDE Sbjct: 241 GYEQAFTRVDSTTGDWYATTGHMIWIGDRTRQLDHGHIEYFRGIKNPIGLKCGPSLKPDE 300 Query: 301 LLKLIDILNPEDEPGRLTLINRFGADKVGDHLPGLIRAVQREGRRVVWSCDPMHGNTITS 360 LLKLID+LNP++EPGRLTLINRFG+DKV HLP LIRAV+REGR VVWSCDPMHGNTITS Sbjct: 301 LLKLIDVLNPDNEPGRLTLINRFGSDKVDAHLPQLIRAVKREGRSVVWSCDPMHGNTITS 360 Query: 361 TSGYKTRPFDRVLSEVRSFFQIHAAEGTHAGGVHLEMTGQDVTECIGGARAITDEDLNDR 420 TSGYKTRPFDRVLSEV+SFF IHAAEGTHAGGVHLEMTGQDVTECIGGARAITDEDLNDR Sbjct: 361 TSGYKTRPFDRVLSEVKSFFTIHAAEGTHAGGVHLEMTGQDVTECIGGARAITDEDLNDR 420 Query: 421 YHTVCDPRLNAEQSIDMAFLIAELLKQERAGKVKPMPAAAGL 462 YHTVCDPRLNAEQSIDMAFLIAELLKQERAGKVKPMPA AG Sbjct: 421 YHTVCDPRLNAEQSIDMAFLIAELLKQERAGKVKPMPAVAGF 462 >ref|YP_001206651.1| 3-deoxy-7-phosphoheptulonate synthase [Bradyrhizobium sp. ORS 278] emb|CAL78434.1| 3-deoxy-7-phosphoheptulonate synthase (Phospho-2-dehydro-3-deoxyheptonate aldolase) (DAHP synthetase class II) [Bradyrhizobium sp. ORS 278] Length = 462 Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/462 (90%), Positives = 437/462 (94%) Query: 1 MSERWTPDSWRAKKVLQVPDYPDAKALADVEAQLATFPPLVFAGEARRGAKAKGRVAAGE 60 M+ERW+P+SWR+K V QVPDYPD KALA+VEAQLATFPPLVFAGEAR KA RVAAGE Sbjct: 1 MTERWSPESWRSKPVQQVPDYPDQKALAEVEAQLATFPPLVFAGEARNLKKALARVAAGE 60 Query: 61 AFLLQGGDCAESFAEHGANNIRDFFRVFLQMAVVLTYAGALPVVKVGRIAGQFAKPRSSP 120 AFLLQGGDCAESFAEHGANNIRDFFRV LQMAVV+TYAGA+PVVKVGRIAGQFAKPRSSP Sbjct: 61 AFLLQGGDCAESFAEHGANNIRDFFRVLLQMAVVMTYAGAVPVVKVGRIAGQFAKPRSSP 120 Query: 121 TEKQGDVELPSYRGDIVNDIAFTPEARIPDPQRQLMAYRQSAATLNLLRAFATGGFANLG 180 EK VELPSYRGDIVND AFTPEARIP+PQRQL AYRQSAATLNLLRAFATGGFANLG Sbjct: 121 MEKINGVELPSYRGDIVNDTAFTPEARIPNPQRQLDAYRQSAATLNLLRAFATGGFANLG 180 Query: 181 SVHQWMLGFLKDSPQSRRYKELADRISDALNFMRACGLDLESHPELRATDFYTSHEALLL 240 SVHQWMLGF+KDSPQSRRYKELADRIS+ALNFMRACGLDLESHPELRATDFYTSHEALLL Sbjct: 181 SVHQWMLGFVKDSPQSRRYKELADRISEALNFMRACGLDLESHPELRATDFYTSHEALLL 240 Query: 241 GYEQAMTRVDSTTGDWYATSGHMIWIGDRTRQLDHGHVEYFRGIKNPIGLKCGPSLKPDE 300 GYEQA TRVDSTTGDWYATSGH IWIGDRTRQLDHGHVEYFRGIKNPIGLKCGPSLKPDE Sbjct: 241 GYEQAFTRVDSTTGDWYATSGHFIWIGDRTRQLDHGHVEYFRGIKNPIGLKCGPSLKPDE 300 Query: 301 LLKLIDILNPEDEPGRLTLINRFGADKVGDHLPGLIRAVQREGRRVVWSCDPMHGNTITS 360 LLKLIDILNPE+EPGRLTLI+RFGADKVGDHLPGLIRAVQREGR+VVWSCDPMHGNTITS Sbjct: 301 LLKLIDILNPENEPGRLTLISRFGADKVGDHLPGLIRAVQREGRKVVWSCDPMHGNTITS 360 Query: 361 TSGYKTRPFDRVLSEVRSFFQIHAAEGTHAGGVHLEMTGQDVTECIGGARAITDEDLNDR 420 SGYKTRPFDR+++EVR+FF HAAEGTHAGG+HLEMTG+DVTECIGGARAITDEDLNDR Sbjct: 361 NSGYKTRPFDRIIAEVRAFFAAHAAEGTHAGGIHLEMTGKDVTECIGGARAITDEDLNDR 420 Query: 421 YHTVCDPRLNAEQSIDMAFLIAELLKQERAGKVKPMPAAAGL 462 YHTVCDPRLNAEQSIDMAFLIAELLKQ+R GK PMPA AG Sbjct: 421 YHTVCDPRLNAEQSIDMAFLIAELLKQQRGGKSSPMPAVAGF 462 >ref|YP_001239492.1| 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase [Bradyrhizobium sp. BTAi1] gb|ABQ35586.1| 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase [Bradyrhizobium sp. BTAi1] Length = 462 Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/462 (90%), Positives = 439/462 (95%) Query: 1 MSERWTPDSWRAKKVLQVPDYPDAKALADVEAQLATFPPLVFAGEARRGAKAKGRVAAGE 60 M+ERW+P+SWR+K V QVP+YPD KALA+VEAQLATFPPLVFAGEAR K+ RVAAGE Sbjct: 1 MTERWSPESWRSKPVQQVPEYPDPKALAEVEAQLATFPPLVFAGEARNLKKSLARVAAGE 60 Query: 61 AFLLQGGDCAESFAEHGANNIRDFFRVFLQMAVVLTYAGALPVVKVGRIAGQFAKPRSSP 120 AFLLQGGDCAESFAEHGANNIRDFFRV LQMAVV+TYAGA+PVVKVGRIAGQFAKPRSSP Sbjct: 61 AFLLQGGDCAESFAEHGANNIRDFFRVLLQMAVVMTYAGAVPVVKVGRIAGQFAKPRSSP 120 Query: 121 TEKQGDVELPSYRGDIVNDIAFTPEARIPDPQRQLMAYRQSAATLNLLRAFATGGFANLG 180 TEK VELPSYRGDIVND AFTPEARIP+PQRQL AYRQSAATLNLLRAFATGGFANLG Sbjct: 121 TEKINGVELPSYRGDIVNDTAFTPEARIPNPQRQLDAYRQSAATLNLLRAFATGGFANLG 180 Query: 181 SVHQWMLGFLKDSPQSRRYKELADRISDALNFMRACGLDLESHPELRATDFYTSHEALLL 240 SVHQWMLGF+KDSPQSRRYKELADRIS+ALNFMRACGLDLESHPELRATDFYTSHEALLL Sbjct: 181 SVHQWMLGFVKDSPQSRRYKELADRISEALNFMRACGLDLESHPELRATDFYTSHEALLL 240 Query: 241 GYEQAMTRVDSTTGDWYATSGHMIWIGDRTRQLDHGHVEYFRGIKNPIGLKCGPSLKPDE 300 GYEQA TRVDSTTGDWYATSGH IWIGDRTRQLDHGHVEYFRGIKNPIGLKCGPSLKPDE Sbjct: 241 GYEQAFTRVDSTTGDWYATSGHFIWIGDRTRQLDHGHVEYFRGIKNPIGLKCGPSLKPDE 300 Query: 301 LLKLIDILNPEDEPGRLTLINRFGADKVGDHLPGLIRAVQREGRRVVWSCDPMHGNTITS 360 LLKLIDILNP++EPGRLTLI+RFGADKVGDHLP LIRAVQREGR+VVWSCDPMHGNTITS Sbjct: 301 LLKLIDILNPDNEPGRLTLISRFGADKVGDHLPHLIRAVQREGRKVVWSCDPMHGNTITS 360 Query: 361 TSGYKTRPFDRVLSEVRSFFQIHAAEGTHAGGVHLEMTGQDVTECIGGARAITDEDLNDR 420 TSGYKTRPFDR++SEVR+FF +HAAEGTHAGG+HLEMTG+DVTECIGGARAITDEDLNDR Sbjct: 361 TSGYKTRPFDRIISEVRAFFAVHAAEGTHAGGIHLEMTGKDVTECIGGARAITDEDLNDR 420 Query: 421 YHTVCDPRLNAEQSIDMAFLIAELLKQERAGKVKPMPAAAGL 462 YHTVCDPRLNAEQSIDMAFLIAELLKQ+R GK PMPA AG Sbjct: 421 YHTVCDPRLNAEQSIDMAFLIAELLKQQRGGKSAPMPAVAGF 462 >ref|YP_002289500.1| 3-deoxy-7-phosphoheptulonate synthase [Oligotropha carboxidovorans OM5] ref|YP_004632493.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Oligotropha carboxidovorans OM5] gb|ACI93635.1| 3-deoxy-7-phosphoheptulonate synthase [Oligotropha carboxidovorans OM5] gb|AEI02676.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Oligotropha carboxidovorans OM4] gb|AEI06252.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Oligotropha carboxidovorans OM5] Length = 462 Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/462 (89%), Positives = 437/462 (94%) Query: 1 MSERWTPDSWRAKKVLQVPDYPDAKALADVEAQLATFPPLVFAGEARRGAKAKGRVAAGE 60 M+ERWTP+SWR K VLQVPDYP+AKALADVEAQLATFPPLVFAGEAR KA RVAAGE Sbjct: 1 MAERWTPESWRKKPVLQVPDYPNAKALADVEAQLATFPPLVFAGEARNLKKALARVAAGE 60 Query: 61 AFLLQGGDCAESFAEHGANNIRDFFRVFLQMAVVLTYAGALPVVKVGRIAGQFAKPRSSP 120 AFLLQGGDCAESFAEHGANNIRDFFRVFLQMAVVLTYAG LPVVKVGRIAGQFAKPRSSP Sbjct: 61 AFLLQGGDCAESFAEHGANNIRDFFRVFLQMAVVLTYAGGLPVVKVGRIAGQFAKPRSSP 120 Query: 121 TEKQGDVELPSYRGDIVNDIAFTPEARIPDPQRQLMAYRQSAATLNLLRAFATGGFANLG 180 TEK VELPSYRGDI+NDIAFTPEAR+PDP+RQL AYRQSAATLNLLRAFATGGFANLG Sbjct: 121 TEKVNGVELPSYRGDIINDIAFTPEARVPDPRRQLAAYRQSAATLNLLRAFATGGFANLG 180 Query: 181 SVHQWMLGFLKDSPQSRRYKELADRISDALNFMRACGLDLESHPELRATDFYTSHEALLL 240 SVHQWMLGF+KDS QSRRYKELADRISDALNFMRACGL+LESHPELRAT+FYTSHEALLL Sbjct: 181 SVHQWMLGFVKDSHQSRRYKELADRISDALNFMRACGLNLESHPELRATEFYTSHEALLL 240 Query: 241 GYEQAMTRVDSTTGDWYATSGHMIWIGDRTRQLDHGHVEYFRGIKNPIGLKCGPSLKPDE 300 G+EQA TRVDSTTGDWYATSGHM+WIGDRTRQLDHGHVEYFRGIKNPIGLKCGPSLKPDE Sbjct: 241 GFEQAFTRVDSTTGDWYATSGHMLWIGDRTRQLDHGHVEYFRGIKNPIGLKCGPSLKPDE 300 Query: 301 LLKLIDILNPEDEPGRLTLINRFGADKVGDHLPGLIRAVQREGRRVVWSCDPMHGNTITS 360 LLKLIDILNP++EPGRLTLINR GADK+GD LP IRAVQREG+ VVWSCDPMHGNTITS Sbjct: 301 LLKLIDILNPDNEPGRLTLINRSGADKIGDTLPQFIRAVQREGKAVVWSCDPMHGNTITS 360 Query: 361 TSGYKTRPFDRVLSEVRSFFQIHAAEGTHAGGVHLEMTGQDVTECIGGARAITDEDLNDR 420 TSGYKTRPFDR+LSE++SFF++HAAEGTHAGGVHLEMTGQDVTECIGGARAITDEDLNDR Sbjct: 361 TSGYKTRPFDRILSELKSFFEVHAAEGTHAGGVHLEMTGQDVTECIGGARAITDEDLNDR 420 Query: 421 YHTVCDPRLNAEQSIDMAFLIAELLKQERAGKVKPMPAAAGL 462 YHTVCDPRLNAEQSIDMAFLIAE LKQ R K +P+PA AGL Sbjct: 421 YHTVCDPRLNAEQSIDMAFLIAEFLKQGRDRKAQPLPAVAGL 462