BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0223.0008.p (372 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240249.1| putative acyl-CoA dehydrogenase [Bradyrhizob... 607 e-171 ref|ZP_08486563.1| acyl-CoA dehydrogenase domain-containing prot... 449 e-124 ref|YP_003598522.1| acyl-CoA dehydrogenase [Bacillus megaterium ... 411 e-112 ref|YP_004588566.1| Butyryl-CoA dehydrogenase [Geobacillus therm... 410 e-112 ref|YP_003989881.1| acyl-CoA dehydrogenase domain-containing pro... 409 e-112 >ref|YP_001240249.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ36343.1| putative Acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 398 Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust. Identities = 298/360 (82%), Positives = 324/360 (90%), Gaps = 2/360 (0%) Query: 1 MAQENLARKIDDDVYARLDAAIDATVKVNADRNDKESRFPRENLRALSEAGWTGVLNEVQ 60 MA ARKI++ Y++LDA + +K NADRND+E RFPRENL AL+EAGWTGVLN+ + Sbjct: 1 MATSTAARKIEEGPYSQLDAIVADVIKANADRNDREGRFPRENLLALAEAGWTGVLNDPR 60 Query: 61 HGGLGLAHVDFAEAAYRIGQADASTGLVYVMHVGAAQTINLFGSADQKERWLKSNNGGLL 120 GGLGL HVDFAEAAYRIGQADASTGLVYVMHVGAAQTINLFG+ DQKERWLK++NG LL Sbjct: 61 FGGLGLGHVDFAEAAYRIGQADASTGLVYVMHVGAAQTINLFGTDDQKERWLKADNGRLL 120 Query: 121 GTYSTSERATGGHWWYNLSEASRDGEDYLVNAEKSFTTSSGQADYYVVQTRTPGAKDQAD 180 GTYSTSERATGGHWWYNLSEASRDGEDY +NA+KSFTTSSGQAD+YV QTRTPGAKDQAD Sbjct: 121 GTYSTSERATGGHWWYNLSEASRDGEDYRLNADKSFTTSSGQADFYVAQTRTPGAKDQAD 180 Query: 181 IVFFIVDGKAQGIESRPWDALGVRANHSGPIRYSNVRVPQRDRLGTEGQGKEIIYDGVSP 240 I+FFIVDGKA+GI+SRPW+ALGVRANHSG I Y NV VP+RDRLG EGQGKEIIYDGVSP Sbjct: 181 IIFFIVDGKAEGIQSRPWEALGVRANHSGGISYKNVHVPKRDRLGAEGQGKEIIYDGVSP 240 Query: 241 VYLIGLGAVWEGVARGALNAAVAHTTSFVHKDRNKSLSDYQAIRQELGAAKVLVETLRPW 300 VYLIGLGAVWEG+ARG LNAAVAHTT FVHKDRNKSLSDYQAIRQELGAAKVLVE+LRPW Sbjct: 241 VYLIGLGAVWEGLARGVLNAAVAHTTGFVHKDRNKSLSDYQAIRQELGAAKVLVESLRPW 300 Query: 301 RNELAARLDVLWRAGRPQSEILIPLTEFKVHAAEVANKVAATALTVTGGYXAVRSSAPIE 360 R ELA +LD LWRAGRPQSEILIPLTEFKVHAAEVANKVA++ALTVTGGY R PIE Sbjct: 301 RIELAHKLDELWRAGRPQSEILIPLTEFKVHAAEVANKVASSALTVTGGYGYHR--GPIE 358 >ref|ZP_08486563.1| acyl-CoA dehydrogenase domain-containing protein [Methylomicrobium album BG8] gb|EGL02490.1| acyl-CoA dehydrogenase domain-containing protein [Methylomicrobium album BG8] Length = 393 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 223/350 (63%), Positives = 269/350 (76%), Gaps = 4/350 (1%) Query: 12 DDVYARLDAAIDATVKVNADRNDKESRFPRENLRALSEAGWTGVLNEVQHGGLGLAHVDF 71 + + + + A +D ++ NA+R D + FPRENL AL +AGW GVL ++GGLGL HV F Sbjct: 7 EKIRSDIRALVDEVIRPNAERTD-QGHFPRENLNALGQAGWNGVLIPQEYGGLGLDHVAF 65 Query: 72 AEAAYRIGQADASTGLVYVMHVGAAQTINLFGSADQKERWLKSNNGGLLGTYSTSERATG 131 + A IG+A ASTGLVYVMH GAAQTINLFG+ DQKERWLK GL+GTYSTSE+A+G Sbjct: 66 SIVAEEIGRACASTGLVYVMHTGAAQTINLFGNRDQKERWLKPARDGLVGTYSTSEKASG 125 Query: 132 GHWWYNLSEASRDGED-YLVNAEKSFTTSSGQADYYVVQTRTPGAKDQADIVFFIVDGKA 190 GHWW+N SEA+RDG+D YL+NAEKSFTTS+GQADYY+ QTR+PGAK DI FFIVD K Sbjct: 126 GHWWFNFSEAARDGDDHYLLNAEKSFTTSAGQADYYIFQTRSPGAKSATDISFFIVDSKL 185 Query: 191 QGIESRPWDALGVRANHSGPIRYSNVRVPQRDRLGTEGQGKEIIYDGVSPVYLIGLGAVW 250 GI W+ALGVR NHSGPI Y +VRV DRLG EGQGK+I+Y GVSPVYL+GLGAVW Sbjct: 186 DGITHGTWEALGVRGNHSGPITYKDVRVQSIDRLGEEGQGKDIVYHGVSPVYLVGLGAVW 245 Query: 251 EGVARGALNAAVAHTTSFVHKDRNKSLSDYQAIRQELGAAKVLVETLRPWRNELAARLDV 310 GVAR AL A AH T +H+D N+ LSDYQ +RQ+LG +K+LVE+LRPW++ELA +LD Sbjct: 246 HGVARAALEKASAHLTGNIHRDFNRKLSDYQVLRQQLGESKILVESLRPWQHELARQLDQ 305 Query: 311 LWRAGRPQSEILIPLTEFKVHAAEVANKVAATALTVTGGYXAVRSSAPIE 360 L AG+PQ +IL+PLTEFKVHAAEVAN A AL V+GGY + PIE Sbjct: 306 LQAAGQPQGQILLPLTEFKVHAAEVANISARNALDVSGGYGYKK--GPIE 353 >ref|YP_003598522.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319] gb|ADF40172.1| acyl-CoA dehydrogenase [Bacillus megaterium DSM 319] Length = 406 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 199/354 (56%), Positives = 255/354 (72%), Gaps = 2/354 (0%) Query: 7 ARKIDDDVYARLDAAIDATVKVNADRNDKESRFPRENLRALSEAGWTGVLNEVQHGGLGL 66 AR + ++ + +D ++ NA D+E FPR+NL AL +AGW +L + GL L Sbjct: 15 ARAYYASIREKITSLVDEVIRPNAALTDEEGVFPRKNLEALIKAGWGNILVPKAYSGLEL 74 Query: 67 AHVDFAEAAYRIGQADASTGLVYVMHVGAAQTINLFGSADQKERWLKSNNGGLLGTYSTS 126 HV FA A I +A AST LVYVMHVGA QTI L+G+ DQK+RWL+ + GL+GTYSTS Sbjct: 75 DHVAFAIVAEEIAKACASTALVYVMHVGAIQTITLYGNDDQKKRWLQPIDQGLIGTYSTS 134 Query: 127 ERATGGHWWYNLSEASRDGEDYLVNAEKSFTTSSGQADYYVVQTRTPGAKDQADIVFFIV 186 E+A+GGHWWYN S+A R+GEDY+VNA+KSFTTS+GQAD+Y+VQTR+P A++ DI FFIV Sbjct: 135 EKASGGHWWYNFSQAQRNGEDYVVNADKSFTTSAGQADFYIVQTRSPEAQEATDISFFIV 194 Query: 187 DGKAQGIESRPWDALGVRANHSGPIRYSNVRVPQRDRLGTEGQGKEIIYDGVSPVYLIGL 246 DGK+ GI + PW+ALGVR NHSGPI Y NV VP+ D LG+E GKEI+ +GVSP+YLIGL Sbjct: 195 DGKSDGITASPWEALGVRGNHSGPISYKNVHVPKEDLLGSEETGKEIVLNGVSPIYLIGL 254 Query: 247 GAVWEGVARGALNAAVAHTTSFVHKDRNKSLSDYQAIRQELGAAKVLVETLRPWRNELAA 306 G+ W GVA AL AV H T +H+D N LSDYQ IRQ++ AKVL+E+ +PW+ +LA Sbjct: 255 GSAWLGVAEHALELAVNHATRTIHRDFNNQLSDYQVIRQQIAEAKVLIESTKPWQIDLAE 314 Query: 307 RLDVLWRAGRPQSEILIPLTEFKVHAAEVANKVAATALTVTGGYXAVRSSAPIE 360 +LD+L + Q + +PLTEFKVHA+EVANK AL V+GGY PIE Sbjct: 315 QLDILQAEQKAQGVLTLPLTEFKVHASEVANKATRIALDVSGGYG--YKKGPIE 366 >ref|YP_004588566.1| Butyryl-CoA dehydrogenase [Geobacillus thermoglucosidasius C56-YS93] gb|AEH48485.1| Butyryl-CoA dehydrogenase [Geobacillus thermoglucosidasius C56-YS93] Length = 401 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 203/333 (60%), Positives = 252/333 (75%) Query: 18 LDAAIDATVKVNADRNDKESRFPRENLRALSEAGWTGVLNEVQHGGLGLAHVDFAEAAYR 77 + A ++ +K NAD D++ FP++NL+ L+E GW VL + G GL HV FA AA Sbjct: 21 IRAIVEKVIKPNADIIDRDGIFPKQNLQVLAETGWNSVLIPERWDGRGLDHVAFAIAAEE 80 Query: 78 IGQADASTGLVYVMHVGAAQTINLFGSADQKERWLKSNNGGLLGTYSTSERATGGHWWYN 137 I + ST LVYVMHVGAAQTI L+G+ DQKERWLK GL+GTYSTSE+ATGGHWW+N Sbjct: 81 IARGCPSTSLVYVMHVGAAQTIALYGNDDQKERWLKPIRQGLIGTYSTSEKATGGHWWFN 140 Query: 138 LSEASRDGEDYLVNAEKSFTTSSGQADYYVVQTRTPGAKDQADIVFFIVDGKAQGIESRP 197 LSEASRDGE Y++NAEKSFTTSSGQAD+YVVQTR+PGA++ D+ FFIVDGK GI+ Sbjct: 141 LSEASRDGEYYILNAEKSFTTSSGQADFYVVQTRSPGAQEPTDVSFFIVDGKLPGIKPGV 200 Query: 198 WDALGVRANHSGPIRYSNVRVPQRDRLGTEGQGKEIIYDGVSPVYLIGLGAVWEGVARGA 257 W+ALGVR NHSGPI Y VR+ QRD+LG EGQG+EI+ GVSP+YLIGLG+ W GVA A Sbjct: 201 WEALGVRGNHSGPITYEGVRIHQRDKLGKEGQGREILESGVSPIYLIGLGSTWLGVAEAA 260 Query: 258 LNAAVAHTTSFVHKDRNKSLSDYQAIRQELGAAKVLVETLRPWRNELAARLDVLWRAGRP 317 L AA ++ +H+D NK L+DYQ IRQ+L KVL+++L+PW+ LA +LD L G+P Sbjct: 261 LEAATSYVKETIHRDFNKRLADYQVIRQQLAEVKVLIDSLKPWQYSLAKQLDELQAQGKP 320 Query: 318 QSEILIPLTEFKVHAAEVANKVAATALTVTGGY 350 Q E+L+PL EFK+HA+EVANK A AL VTGGY Sbjct: 321 QVELLLPLVEFKIHASEVANKAAKAALDVTGGY 353 >ref|YP_003989881.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] gb|ADP75270.1| acyl-CoA dehydrogenase domain-containing protein [Geobacillus sp. Y4.1MC1] Length = 401 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 203/333 (60%), Positives = 251/333 (75%) Query: 18 LDAAIDATVKVNADRNDKESRFPRENLRALSEAGWTGVLNEVQHGGLGLAHVDFAEAAYR 77 + A ++ +K NAD D++ FP +NL+ L+E GW VL + G GL HV FA AA Sbjct: 21 IRAIVEKVIKPNADIIDRDGIFPNQNLQVLAETGWNSVLIPERWDGRGLDHVAFAIAAEE 80 Query: 78 IGQADASTGLVYVMHVGAAQTINLFGSADQKERWLKSNNGGLLGTYSTSERATGGHWWYN 137 I + ST LVYVMHVGAAQTI L+G+ DQKERWLK GL+GTYSTSE+ATGGHWW+N Sbjct: 81 IARGCPSTSLVYVMHVGAAQTIALYGNDDQKERWLKPIRQGLIGTYSTSEKATGGHWWFN 140 Query: 138 LSEASRDGEDYLVNAEKSFTTSSGQADYYVVQTRTPGAKDQADIVFFIVDGKAQGIESRP 197 LSEASRDGE Y++NAEKSFTTSSGQAD+YVVQTR+PGA++ D+ FFIVDGK GI+ Sbjct: 141 LSEASRDGEYYILNAEKSFTTSSGQADFYVVQTRSPGAQEPTDVSFFIVDGKLPGIKPGV 200 Query: 198 WDALGVRANHSGPIRYSNVRVPQRDRLGTEGQGKEIIYDGVSPVYLIGLGAVWEGVARGA 257 W+ALGVR NHSGPI Y VR+ QRD+LG EGQG+EI+ GVSP+YLIGLG+ W GVA A Sbjct: 201 WEALGVRGNHSGPITYEGVRIHQRDKLGKEGQGREILESGVSPIYLIGLGSTWLGVAEAA 260 Query: 258 LNAAVAHTTSFVHKDRNKSLSDYQAIRQELGAAKVLVETLRPWRNELAARLDVLWRAGRP 317 L AA ++ +H+D NK L+DYQ IRQ+L KVL+++L+PW+ LA +LD L G+P Sbjct: 261 LEAATSYVKETIHRDFNKRLADYQVIRQQLAEVKVLIDSLKPWQYSLAKQLDELQAQGKP 320 Query: 318 QSEILIPLTEFKVHAAEVANKVAATALTVTGGY 350 Q E+L+PL EFK+HA+EVANK A AL VTGGY Sbjct: 321 QVELLLPLVEFKIHASEVANKAAKAALDVTGGY 353