BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0223.0007.p (427 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06890507.1| HipA N-terminal domain protein [Methylosinus ... 525 e-147 ref|ZP_08185909.1| HipA domain-containing protein [Xanthomonas g... 426 e-117 ref|YP_203146.1| HipA [Xanthomonas oryzae pv. oryzae KACC10331] ... 409 e-112 ref|ZP_02241351.1| HipA [Xanthomonas oryzae pv. oryzicola BLS256] 409 e-112 ref|YP_002966489.1| HipA-like protein [Methylobacterium extorque... 380 e-103 >ref|ZP_06890507.1| HipA N-terminal domain protein [Methylosinus trichosporium OB3b] gb|EFH01022.1| HipA N-terminal domain protein [Methylosinus trichosporium OB3b] Length = 426 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 252/427 (59%), Positives = 324/427 (75%), Gaps = 1/427 (0%) Query: 1 MTNELIALLDGREVGRVHNDARGRLTFVYDSDWRQTRDAYPISLSMPLAAEEHGPAAVQA 60 MT EL+AL +GR+VGRV D RGRL F+Y+ WR + AYP+SLSMPL AE+HG + A Sbjct: 1 MTAELLALANGRKVGRVIRDPRGRLAFIYEETWRAAQGAYPLSLSMPLTAEKHGHQPIDA 60 Query: 61 FLWGLLPDNERVLDRWAKKFQVSARNVFALISHVGEDCAGAIQFVTPDRLEKLQSGTDDK 120 FLWGLLPDNE VL RWA++FQVSARN FAL+SHVGEDCAGA+QFV PDR++ + Sbjct: 61 FLWGLLPDNEAVLARWARRFQVSARNPFALLSHVGEDCAGAVQFVRPDRVDAILGEEPGA 120 Query: 121 VEWLDEAAVAKRLQALREDHAAWRLPRDTGQFSLAGAQPKTALLLQRGQWGIPSGRIPTT 180 VEWL+EA +A+RL+ LR DHAAWR P DTGQFSLAGAQPKTALL + G+WG+PSGR PTT Sbjct: 121 VEWLNEADIAERLRTLRADHAAWRTPSDTGQFSLAGAQPKTALLCENGRWGVPSGRTPTT 180 Query: 181 HILKPPTGYFDGHAENEHICLNLARNLGLPVAETKVMRFENEVAIVVERYDRQFSGNHVI 240 HILKPPTG +DGHAENEH+C++LA LGL A ++V F +EVAIV+ERYDR ++ + +I Sbjct: 181 HILKPPTGEYDGHAENEHLCMSLASRLGLLTARSRVQWFGDEVAIVIERYDRDWTDSAII 240 Query: 241 RVHQEDVCQARGIMPTRKYQSEGGPSATDIIELLRTHSTESVDDIDTFIDALGFNWLIGG 300 RVHQED CQA I PTRKY++EGGP A ++LLRT S +D+ F+DA+ FNWLI G Sbjct: 241 RVHQEDFCQALAIPPTRKYENEGGPGARMAVDLLRTVSGRPQEDVQRFVDAIIFNWLIAG 300 Query: 301 TDAHAKNYSLLLANGPTVRLAPLYDIASILPYDDVDLQKMKLAMKIGGEYKLGQIGAREW 360 TDAHAKNYSLL+ RLAPLYDIASILPY D +++LAMKIG YKL IGA +W Sbjct: 301 TDAHAKNYSLLIGAQGRARLAPLYDIASILPY-GFDPHRVRLAMKIGDTYKLRDIGAPQW 359 Query: 361 RKFAREIRFDAEKVIAGLNSLADLLPDSVSGVCATAQAEGLDNAVIQRLAAKLIERTKDC 420 RKFA ++R +A++V+ + +A +LPD ++ V A+++G+ ++++ RL+ L ER C Sbjct: 360 RKFAGQLRLNADEVLHRIREMAAMLPDHLADVRRAAESDGIAHSIVARLSDALTERADRC 419 Query: 421 QRLLKGL 427 ++++ L Sbjct: 420 RQVIGEL 426 >ref|ZP_08185909.1| HipA domain-containing protein [Xanthomonas gardneri ATCC 19865] gb|EGD16470.1| HipA domain-containing protein [Xanthomonas gardneri ATCC 19865] Length = 419 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 213/414 (51%), Positives = 279/414 (67%), Gaps = 3/414 (0%) Query: 14 VGRVHNDARGRLTFVYDSDWRQTRDAYPISLSMPLAAEEHGPAAVQAFLWGLLPDNERVL 73 +G++ DA GR F YD WR + +A P+SL++PL+ E H AV A +WGLLPDNE L Sbjct: 6 LGQLDADATGRARFAYDPAWRASANAIPLSLNLPLSREHHPTDAVNAVVWGLLPDNETTL 65 Query: 74 DRWAKKFQVSARNVFALISHVGEDCAGAIQFVTPDRLEKLQSGTDDKVEWLDEAAVAKRL 133 RWA +FQVS RN AL+SHVGEDCAGA+QFVTP RLE + SG +D +E L E+A+ RL Sbjct: 66 QRWASRFQVSPRNPLALLSHVGEDCAGAVQFVTPARLEDVMSGANDSIEPLTESALEMRL 125 Query: 134 QALREDHAAWRLPRDTGQFSLAGAQPKTALLLQRGQWGIPSGRIPTTHILKPPTGYFDGH 193 + LR+D A R D GQFSLAGAQ K ALL QW I +GRIPTTHILKPP+G +DG Sbjct: 126 RRLRQDVGAARQIDDVGQFSLAGAQAKIALLHDGQQWAIQAGRIPTTHILKPPSGEYDGF 185 Query: 194 AENEHICLNLARNLGLPVAETKVMRFENEVAIVVERYDRQFSGNHVIRVHQEDVCQARGI 253 ENE CL LAR +GL A + +RF +E AI VERYDR + ++R+HQED CQA G+ Sbjct: 186 VENELFCLRLARKIGLSTAAGQALRFGDETAICVERYDRIATQGTLLRIHQEDFCQALGV 245 Query: 254 MPTRKYQSEGGPSATDIIELLRTHSTESVDDIDTFIDALGFNWLIGGTDAHAKNYSLLLA 313 MP KYQ +GGP T+I +LL HS+ + D+++ AL FN+LIGGTDAHAKNYSLLL Sbjct: 246 MPQIKYQHQGGPGPTEIAQLLWMHSSHARQDVESLFQALIFNYLIGGTDAHAKNYSLLLG 305 Query: 314 NGPTVRLAPLYDIASILPYDDVDLQKMKLAMKIGGEYKLGQIGAREWRKFAREIRFDAEK 373 VRLAPLYDI+S LPY + +K+KLAMKIGG Y+ + + +W++ A ++R +A Sbjct: 306 QAGQVRLAPLYDISSALPYPHLQQRKIKLAMKIGGHYRWWDVRSSDWQQLALQMRLEASA 365 Query: 374 VIAGLNSLADLLPDSVSGVCATAQAEGLDNAVIQRLAAKLIERTKDCQRLLKGL 427 +A + A+ LPD + A ++EG+++ ++ L + CQR LK L Sbjct: 366 CLAWMRLAANQLPDHAQDLAAELRSEGIEHPILDTLVDAI---HAACQRALKLL 416 >ref|YP_203146.1| HipA [Xanthomonas oryzae pv. oryzae KACC10331] ref|YP_453275.1| HipA protein [Xanthomonas oryzae pv. oryzae MAFF 311018] ref|YP_001911469.1| HipA [Xanthomonas oryzae pv. oryzae PXO99A] gb|AAW77761.1| HipA protein [Xanthomonas oryzae pv. oryzae KACC10331] dbj|BAE71001.1| HipA protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gb|ACD56937.1| HipA [Xanthomonas oryzae pv. oryzae PXO99A] Length = 425 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 207/418 (49%), Positives = 269/418 (64%), Gaps = 3/418 (0%) Query: 5 LIALLDGREVGRVHNDARGRLTFVYDSDWRQTRDAYPISLSMPLAAEEHGPAAVQAFLWG 64 L+AL++ + +G + D G F Y DW+ +++A P+SL++PL+ E H AV A LWG Sbjct: 3 LVALIENQVIGHLAPDQHGHPRFTYAPDWQHSKNAIPLSLNLPLSKEHHPTEAVSAVLWG 62 Query: 65 LLPDNERVLDRWAKKFQVSARNVFALISHVGEDCAGAIQFVTPDRLEKLQSGTDDKVEWL 124 LLPDNE L RWA +FQVS RN AL+SHVGEDCAGA+QFVT RLE + SG D +E L Sbjct: 63 LLPDNEATLQRWASRFQVSPRNPLALLSHVGEDCAGAVQFVTEARLEDVLSGASDGIEPL 122 Query: 125 DEAAVAKRLQALREDHAAWRLPRDTGQFSLAGAQPKTALLLQRGQWGIPSGRIPTTHILK 184 + + RL+ LR+D A R D GQFSLAGAQ K ALL QW IP+GRIPTTHILK Sbjct: 123 TDGELEARLRRLRQDIGAARQVDDVGQFSLAGAQAKIALLHDGLQWAIPAGRIPTTHILK 182 Query: 185 PPTGYFDGHAENEHICLNLARNLGLPVAETKVMRFENEVAIVVERYDRQFSGNHVIRVHQ 244 PP+G +DG ENE CL LA ++GLP A + +R E AI V+RYDR ++R+HQ Sbjct: 183 PPSGEYDGFVENELFCLCLAHSIGLPTATAQALRVGAETAICVKRYDRTGVNGVLLRIHQ 242 Query: 245 EDVCQARGIMPTRKYQSEGGPSATDIIELLRTHSTESVDDIDTFIDALGFNWLIGGTDAH 304 ED CQA G+MP KYQ++GGP I +LL THS++ D++T AL FN+LIGGTDAH Sbjct: 243 EDTCQALGVMPHIKYQNQGGPGVEAISQLLWTHSSQPRQDVETLFQALVFNYLIGGTDAH 302 Query: 305 AKNYSLLLANGPTVRLAPLYDIASILPYDDVDLQKMKLAMKIGGEYKLGQIGAREWRKFA 364 AKNYSLLL+ VRLAPLYDI+S LPY + +K+K+AMKIG Y+ I +WR+ A Sbjct: 303 AKNYSLLLSQHRQVRLAPLYDISSALPYPQLQQRKIKMAMKIGSHYRWWDIRPGDWRQLA 362 Query: 365 REIRFDAEKVIAGLNSLADLLPDSVSGVCATAQAEGLDNAVIQRLAAKLIERTKDCQR 422 + DA +A + A LPD + + +G+ + V+ L + CQR Sbjct: 363 ETLHLDAPACLAWMAMAASALPDQARDLAVALREDGVAHPVLDALVDAI---AASCQR 417 >ref|ZP_02241351.1| HipA [Xanthomonas oryzae pv. oryzicola BLS256] Length = 425 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 207/418 (49%), Positives = 269/418 (64%), Gaps = 3/418 (0%) Query: 5 LIALLDGREVGRVHNDARGRLTFVYDSDWRQTRDAYPISLSMPLAAEEHGPAAVQAFLWG 64 L+AL++ + +G + D G F Y DW+ +++A P+SL++PL+ E H AV A LWG Sbjct: 3 LVALIENQVIGHLTPDQHGHPRFTYAPDWQHSKNAIPLSLNLPLSKEHHPTEAVSAVLWG 62 Query: 65 LLPDNERVLDRWAKKFQVSARNVFALISHVGEDCAGAIQFVTPDRLEKLQSGTDDKVEWL 124 LLPDNE L RWA +FQVS RN AL+SHVGEDCAGA+QFVT RLE + SG D +E L Sbjct: 63 LLPDNEATLQRWASRFQVSPRNPLALLSHVGEDCAGAVQFVTEARLEDVLSGASDGIEPL 122 Query: 125 DEAAVAKRLQALREDHAAWRLPRDTGQFSLAGAQPKTALLLQRGQWGIPSGRIPTTHILK 184 + + RL+ LR+D A R D GQFSLAGAQ K ALL QW IP+GRIPTTHILK Sbjct: 123 TDGELEARLRRLRQDIGAARQVDDVGQFSLAGAQAKIALLHDGLQWAIPAGRIPTTHILK 182 Query: 185 PPTGYFDGHAENEHICLNLARNLGLPVAETKVMRFENEVAIVVERYDRQFSGNHVIRVHQ 244 PP+G +DG ENE CL LA ++GLP A + +R E AI V+RYDR ++R+HQ Sbjct: 183 PPSGEYDGFVENELFCLCLAHSIGLPTATAQALRVGAETAICVKRYDRTGVNGVLLRIHQ 242 Query: 245 EDVCQARGIMPTRKYQSEGGPSATDIIELLRTHSTESVDDIDTFIDALGFNWLIGGTDAH 304 ED CQA G+MP KYQ++GGP I +LL THS++ D++T AL FN+LIGGTDAH Sbjct: 243 EDTCQALGVMPHIKYQNQGGPGVEAISQLLWTHSSQPRQDVETLFQALVFNYLIGGTDAH 302 Query: 305 AKNYSLLLANGPTVRLAPLYDIASILPYDDVDLQKMKLAMKIGGEYKLGQIGAREWRKFA 364 AKNYSLLL+ VRLAPLYDI+S LPY + +K+K+AMKIG Y+ I +WR+ A Sbjct: 303 AKNYSLLLSQHRQVRLAPLYDISSALPYPHLQQRKIKMAMKIGSHYRWWDIRPGDWRQLA 362 Query: 365 REIRFDAEKVIAGLNSLADLLPDSVSGVCATAQAEGLDNAVIQRLAAKLIERTKDCQR 422 + DA +A + A LPD + + +G+ + V+ L + CQR Sbjct: 363 ETLHLDAPACLAWMAMAASALPDQARDLAVALREDGVAHPVLDALVDAI---AASCQR 417 >ref|YP_002966489.1| HipA-like protein [Methylobacterium extorquens AM1] gb|ACS43148.1| Conserved HipA-like protein [Methylobacterium extorquens AM1] Length = 448 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 200/419 (47%), Positives = 267/419 (63%), Gaps = 6/419 (1%) Query: 4 ELIALLDGREVGRVHNDARGRLTFVYDSDWRQTRDAYPISLSMPLAAEEHGPAAVQAFLW 63 +L LL G +G V A G+L F Y WR+ + P+SLSMPL A+ H V AF+W Sbjct: 11 DLAVLLSGARIGTVRQLASGKLQFEYARSWREVQPNLPLSLSMPLVADVHADGPVTAFMW 70 Query: 64 GLLPDNERVLDRWAKKFQVSARNVFALISHVGEDCAGAIQFVTPDRLEKLQSGTDDKVEW 123 GLLPDNE++LD AK+ Q SARN F+L+ GEDCAGA+QFV P+RL++L +G D+ VEW Sbjct: 71 GLLPDNEKILDGIAKRHQCSARNPFSLLRATGEDCAGAVQFVRPERLDELGAGGDE-VEW 129 Query: 124 LDEAAVAKRLQALREDHAA-WRLPRDTGQFSLAGAQPKTALLLQR--GQWGIPSGRIPTT 180 LDE AVA+R++ L+ D + R+ D G FS+AGAQPKTALLL WGIPSG+ PTT Sbjct: 130 LDEHAVAERIRLLKRDAGSVGRMANDPGSFSVAGAQPKTALLLSADGTTWGIPSGQTPTT 189 Query: 181 HILKPPTGYFDGHAENEHICLNLARNLGLPVAETKVMRFENEVAIVVERYD-RQFSGNHV 239 HILKP + GH ENEH C LA+ GL A + V FE+EV I +RYD R+ + Sbjct: 190 HILKPSSLGLAGHVENEHFCQMLAQAAGLRAASSSVCWFEDEVVIASQRYDRRRMQDGRI 249 Query: 240 IRVHQEDVCQARGIMPTRKYQSEGGPSATDIIELLRTHSTESVDDIDTFIDALGFNWLIG 299 +R+HQED CQA + P +KY+ +GGP A I+ + ++S+ D TF+DA+ FN++I Sbjct: 250 VRIHQEDACQALAVPPWQKYERDGGPGAARIMNEILSYSSRPDVDRKTFMDAVAFNFVIL 309 Query: 300 GTDAHAKNYSLLLANGPTVRLAPLYDIASILPYDDV-DLQKMKLAMKIGGEYKLGQIGAR 358 GTDAHAKNYSLLL +RLAPLYDIAS+LPY + D +KLAM + Y+ +I R Sbjct: 310 GTDAHAKNYSLLLGAANAMRLAPLYDIASVLPYAHIRDDGNLKLAMSVERYYRPNEIMPR 369 Query: 359 EWRKFAREIRFDAEKVIAGLNSLADLLPDSVSGVCATAQAEGLDNAVIQRLAAKLIERT 417 W K A+ +D + ++A + + LPD + V +AEGL V+ L + ER Sbjct: 370 HWTKLAQRASYDPDALLATIGRYVEELPDLAADVAGKCRAEGLTTPVVDDLVDGIAERC 428