BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0223.0004.p         (157 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_519972.1| transcription regulator protein [Ralstonia sola...   216   8e-55
ref|YP_768736.1| MarR family transcriptional regulatory protein ...   214   4e-54
ref|ZP_03267193.1| transcriptional regulator, MarR family [Burkh...   209   8e-53
ref|ZP_03500885.1| MarR family transcriptional regulatory protei...   203   9e-51
ref|YP_002827522.1| putative transcriptional regulator, MarR fam...   199   1e-49

>ref|NP_519972.1| transcription regulator protein [Ralstonia solanacearum GMI1000]
 emb|CAD15553.1| putative transcription regulator protein [Ralstonia solanacearum
           GMI1000]
          Length = 155

 Score =  216 bits (551), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 101/149 (67%), Positives = 127/149 (85%)

Query: 1   MKRAKRTPEGDALTDLVLDLFRLDSLLLTAGDRLVAPLGLTSARWQVLGAIVSAERPQPV 60
           MK  K TP G AL+ L+LDLFRL+S +LTAGDRLVA LGLTSARWQ+LG + + +RPQPV
Sbjct: 1   MKPLKHTPAGAALSGLILDLFRLNSQVLTAGDRLVADLGLTSARWQILGTVNAVDRPQPV 60

Query: 61  AWLARDLGGNRQNVQRIINDLHREGLVSFEVNPHHRRAQLVVLTANGQRAFEAAMELQAP 120
           AWLARD+G NRQNVQRI+NDL +EGLV+FE NPHH+RAQLVV+T  G++A+ AAM+LQ P
Sbjct: 61  AWLARDMGANRQNVQRIVNDLEKEGLVAFEANPHHKRAQLVVMTEKGKQAYGAAMQLQTP 120

Query: 121 WINDLSEGLSVKDIRIVHRVITALRDKLE 149
           WIN L++GL+V+DI+ +H+VI ALR KL+
Sbjct: 121 WINGLAKGLAVEDIKTMHKVIAALRVKLD 149


>ref|YP_768736.1| MarR family transcriptional regulatory protein [Rhizobium
           leguminosarum bv. viciae 3841]
 emb|CAK08643.1| putative MarR family transcriptional regulatory protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 158

 Score =  214 bits (544), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 100/150 (66%), Positives = 125/150 (83%)

Query: 1   MKRAKRTPEGDALTDLVLDLFRLDSLLLTAGDRLVAPLGLTSARWQVLGAIVSAERPQPV 60
           M   +RTP G ALTDL+LDLFRL++ ++ AGD+LV  LGLTSARW VLG +V+A RPQPV
Sbjct: 1   MHEPQRTPAGTALTDLILDLFRLNNRMINAGDKLVDGLGLTSARWHVLGTVVTAGRPQPV 60

Query: 61  AWLARDLGGNRQNVQRIINDLHREGLVSFEVNPHHRRAQLVVLTANGQRAFEAAMELQAP 120
           AWLARD+G NRQNVQRI+NDL +EGL++F+ NPHHRRAQLVVLT  G++A+E AM LQAP
Sbjct: 61  AWLARDMGANRQNVQRIVNDLEKEGLLAFQPNPHHRRAQLVVLTDRGKQAYETAMHLQAP 120

Query: 121 WINDLSEGLSVKDIRIVHRVITALRDKLEG 150
           W++ L+EGL V+D++I H V+ ALR KLEG
Sbjct: 121 WVDMLAEGLQVEDLKITHAVMKALRSKLEG 150


>ref|ZP_03267193.1| transcriptional regulator, MarR family [Burkholderia sp. H160]
 gb|EEA01220.1| transcriptional regulator, MarR family [Burkholderia sp. H160]
          Length = 158

 Score =  209 bits (533), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 103/153 (67%), Positives = 122/153 (79%)

Query: 1   MKRAKRTPEGDALTDLVLDLFRLDSLLLTAGDRLVAPLGLTSARWQVLGAIVSAERPQPV 60
           M++  RTP G+ LT ++LDLFRL+S LLTAGDRLVA LGLTSARWQ+LGAI +AERPQPV
Sbjct: 1   MRKTSRTPAGEFLTGIILDLFRLNSGLLTAGDRLVASLGLTSARWQILGAINAAERPQPV 60

Query: 61  AWLARDLGGNRQNVQRIINDLHREGLVSFEVNPHHRRAQLVVLTANGQRAFEAAMELQAP 120
           AWLARDLG NRQNVQRI+NDL  +GLV FE NPHHRRAQLVVLT  G+ A +AAM LQAP
Sbjct: 61  AWLARDLGANRQNVQRIVNDLAEDGLVRFEANPHHRRAQLVVLTDKGRHALDAAMSLQAP 120

Query: 121 WINDLSEGLSVKDIRIVHRVITALRDKLEGGRE 153
           W+N LS+GL+V +I+  H V+  L+  L    E
Sbjct: 121 WVNRLSDGLAVDEIQAAHHVLMKLQTNLNDMTE 153


>ref|ZP_03500885.1| MarR family transcriptional regulatory protein [Rhizobium etli Kim
           5]
          Length = 158

 Score =  203 bits (516), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 98/150 (65%), Positives = 120/150 (80%)

Query: 1   MKRAKRTPEGDALTDLVLDLFRLDSLLLTAGDRLVAPLGLTSARWQVLGAIVSAERPQPV 60
           M  A RT  GDALT+L+L +FR+++L LT GDRLVA  GLTSARWQ+LGAIV A+RPQPV
Sbjct: 1   MDEATRTTTGDALTELILSMFRVNNLTLTWGDRLVAAFGLTSARWQILGAIVYADRPQPV 60

Query: 61  AWLARDLGGNRQNVQRIINDLHREGLVSFEVNPHHRRAQLVVLTANGQRAFEAAMELQAP 120
           AWLARDLG NRQNVQRI+NDLH EGLV+FE NPHHRRAQLVVLT  G++ ++AA+    P
Sbjct: 61  AWLARDLGANRQNVQRIVNDLHGEGLVAFEPNPHHRRAQLVVLTDKGRQTYDAAIAAYNP 120

Query: 121 WINDLSEGLSVKDIRIVHRVITALRDKLEG 150
            +N ++ GLS+ +I+  HRV+T LR  LEG
Sbjct: 121 RVNAMAAGLSLAEIQTAHRVMTRLRHSLEG 150


>ref|YP_002827522.1| putative transcriptional regulator, MarR family [Sinorhizobium
           fredii NGR234]
 gb|ACP26769.1| putative transcriptional regulator, MarR family [Sinorhizobium
           fredii NGR234]
          Length = 158

 Score =  199 bits (505), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 97/149 (65%), Positives = 117/149 (78%)

Query: 1   MKRAKRTPEGDALTDLVLDLFRLDSLLLTAGDRLVAPLGLTSARWQVLGAIVSAERPQPV 60
           M    RT  GDALT  +L +FR ++L L+ GDRLVAPLGLTSARWQ+LGAIV+A RPQPV
Sbjct: 1   MSEPNRTAAGDALTHFILTMFRANNLTLSWGDRLVAPLGLTSARWQILGAIVAAGRPQPV 60

Query: 61  AWLARDLGGNRQNVQRIINDLHREGLVSFEVNPHHRRAQLVVLTANGQRAFEAAMELQAP 120
           AWLARDLG NRQNVQRI+NDL +E  V+FE NPHHRRAQLVVLT  G++ ++ A+ L  P
Sbjct: 61  AWLARDLGANRQNVQRIVNDLAKEEFVTFEPNPHHRRAQLVVLTEKGRQTYDDAIRLYDP 120

Query: 121 WINDLSEGLSVKDIRIVHRVITALRDKLE 149
            +N L+EG+SV +I   HRV+T LRDKLE
Sbjct: 121 RVNALAEGISVGEIETAHRVMTLLRDKLE 149