BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0222.0003.p         (131 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001220595.1| hypothetical protein BBta_p0291 [Bradyrhizob...   206   1e-51
ref|YP_003065708.1| hypothetical protein p1METDI0100 [Methylobac...   169   1e-40
ref|YP_001754549.1| PilT domain-containing protein [Methylobacte...   156   1e-36
ref|YP_001831004.1| PilT domain-containing protein [Beijerinckia...   150   5e-35
ref|ZP_01228802.1| conserved hypothetical protein [Aurantimonas ...   146   1e-33

>ref|YP_001220595.1| hypothetical protein BBta_p0291 [Bradyrhizobium sp. BTAi1]
 gb|ABQ39923.1| hypothetical protein BBta_p0291 [Bradyrhizobium sp. BTAi1]
          Length = 131

 Score =  206 bits (523), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 111/131 (84%), Positives = 121/131 (92%)

Query: 1   MFIDASALTAMLTDEDEARELLARVQQAATRLTSPLAVWEAAIAVARVLDLSIAEAAESV 60
           MFIDASALTA+LTDE+EARELLAR+QQ  TRLTSPLAVWEAA+AVARVL LS++ AAE+V
Sbjct: 1   MFIDASALTALLTDENEARELLARLQQTGTRLTSPLAVWEAAVAVARVLKLSVSAAAEAV 60

Query: 61  ESYLALMEIRMVNVAPETARIALDAFDRYGKGRHPARLNFGDCFAYACARHLGEPLMFKG 120
           E YLALMEI +V V PETARIALDAFDR+GKGRHPA LNFGDCFAYACARHLG+PLMFKG
Sbjct: 61  EDYLALMEIAVVAVPPETARIALDAFDRFGKGRHPASLNFGDCFAYACARHLGQPLMFKG 120

Query: 121 SDFPQTDIEAA 131
            DFPQTDIEAA
Sbjct: 121 GDFPQTDIEAA 131


>ref|YP_003065708.1| hypothetical protein p1METDI0100 [Methylobacterium extorquens DM4]
 emb|CAX17089.1| Conserved protein of unknown function [Methylobacterium extorquens
           DM4]
          Length = 132

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/131 (62%), Positives = 104/131 (79%)

Query: 1   MFIDASALTAMLTDEDEARELLARVQQAATRLTSPLAVWEAAIAVARVLDLSIAEAAESV 60
           MF+DASALTA+L  E +A  L+AR+QQA  RL+SPLAVWE  IA+AR+LDL++ EA ++V
Sbjct: 2   MFVDASALTAILAGEPDAPALVARLQQARQRLSSPLAVWETTIALARILDLTLPEAQQAV 61

Query: 61  ESYLALMEIRMVNVAPETARIALDAFDRYGKGRHPARLNFGDCFAYACARHLGEPLMFKG 120
             YLAL  I++V V+P+ A  A++AFDR+G+GRHPA LNFGDCFAYACAR    PL+FKG
Sbjct: 62  RDYLALASIQVVAVSPKAADGAIEAFDRFGQGRHPAGLNFGDCFAYACARSYRMPLLFKG 121

Query: 121 SDFPQTDIEAA 131
           +DF  TDI AA
Sbjct: 122 NDFALTDISAA 132


>ref|YP_001754549.1| PilT domain-containing protein [Methylobacterium radiotolerans JCM
           2831]
 gb|ACB23866.1| PilT protein domain protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 131

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/131 (64%), Positives = 101/131 (77%)

Query: 1   MFIDASALTAMLTDEDEARELLARVQQAATRLTSPLAVWEAAIAVARVLDLSIAEAAESV 60
           MF+DASALTA+LTDE +A  L AR+Q+A  R+TSPLAVWE  +AVAR LDL +  A E+V
Sbjct: 1   MFVDASALTAILTDETDAAALAARLQRALRRVTSPLAVWETGVAVARHLDLPVPAAREAV 60

Query: 61  ESYLALMEIRMVNVAPETARIALDAFDRYGKGRHPARLNFGDCFAYACARHLGEPLMFKG 120
            +YL L  I ++ V PE    ALDA+DR+GKGRHPA LNFGDCFAYACAR  G PL++KG
Sbjct: 61  HAYLDLAGIEILAVPPEAEAGALDAYDRFGKGRHPAGLNFGDCFAYACARAHGVPLLYKG 120

Query: 121 SDFPQTDIEAA 131
           +DFP TDIE A
Sbjct: 121 NDFPLTDIETA 131


>ref|YP_001831004.1| PilT domain-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gb|ACB97260.1| PilT protein domain protein [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 132

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 72/130 (55%), Positives = 100/130 (76%), Gaps = 1/130 (0%)

Query: 1   MFIDASALTAMLTDEDEARELLARVQQAATRLTSPLAVWEAAIAVARVLDLSIAEAAESV 60
           MF+DASAL AMLT+ED+A +L  R+ Q + RLT+P+A++E A AVARVLDL   EA E+V
Sbjct: 1   MFVDASALVAMLTNEDDAADLAQRLSQTSKRLTTPIAIFETAAAVARVLDLPFDEAREAV 60

Query: 61  ESYLALMEIRMVNVAPETARIALDAFDRYGKGR-HPARLNFGDCFAYACARHLGEPLMFK 119
           E++L L+ ++++ + P  + +AL+AF+RYGKGR HPA+LN G CF+YACAR+   PL++K
Sbjct: 61  ETFLQLLNVQVLALPPRASTLALEAFERYGKGRGHPAQLNMGACFSYACARYYRMPLLYK 120

Query: 120 GSDFPQTDIE 129
             D  QTDIE
Sbjct: 121 CDDLRQTDIE 130


>ref|ZP_01228802.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gb|EAS48644.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 140

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/131 (54%), Positives = 95/131 (72%)

Query: 1   MFIDASALTAMLTDEDEARELLARVQQAATRLTSPLAVWEAAIAVARVLDLSIAEAAESV 60
           MFIDASA+ A+L  E +A +L AR+ +   RLTS LA+WEA++A++R+  +    A   V
Sbjct: 10  MFIDASAICAILAGEADAVQLSARMDRHNRRLTSALAIWEASVALSRIRGVDPQIARRMV 69

Query: 61  ESYLALMEIRMVNVAPETARIALDAFDRYGKGRHPARLNFGDCFAYACARHLGEPLMFKG 120
           + +L    +R+V + P TA IA+DA+ RYGKGRHPA LNFGDCFAYACARH   PL++KG
Sbjct: 70  DEFLGDQSVRIVAIEPGTAAIAIDAYARYGKGRHPAALNFGDCFAYACARHFDVPLLYKG 129

Query: 121 SDFPQTDIEAA 131
           +DF +TDI AA
Sbjct: 130 NDFARTDIGAA 140