BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0218.0050.p         (146 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001989217.1| hypothetical protein Rpal_0179 [Rhodopseudom...    62   4e-08
ref|YP_002361093.1| hypothetical protein Msil_0760 [Methylocella...    61   5e-08
ref|NP_945537.1| hypothetical protein RPA0184 [Rhodopseudomonas ...    61   5e-08
ref|YP_001833417.1| hypothetical protein Bind_2315 [Beijerinckia...    60   1e-07
ref|NP_774706.1| hypothetical protein blr8066 [Bradyrhizobium ja...    60   1e-07

>ref|YP_001989217.1| hypothetical protein Rpal_0179 [Rhodopseudomonas palustris TIE-1]
 gb|ACE98741.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 180

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 51/88 (57%)

Query: 3   LRRSIEGLGPYPSLLLLALPIATVEPLKLAAVALAGKGHWITGTAMIAACYAFSLLIVER 62
           L R ++ L P  +L +  +P+A + PLKL A+AL  +GHWI G  + AA   F L +   
Sbjct: 47  LARWVDHLSPAMTLPVFLVPVAPLYPLKLFALALIAQGHWIAGLGIFAAAQVFGLGVAAF 106

Query: 63  LFVIVKPKLLSISWFARLWEGFVFARAR 90
           +F + KPKLL + WFA  +   +  RA+
Sbjct: 107 IFDVTKPKLLQLRWFAATYRWVIELRAK 134


>ref|YP_002361093.1| hypothetical protein Msil_0760 [Methylocella silvestris BL2]
 gb|ACK49731.1| conserved hypothetical protein [Methylocella silvestris BL2]
          Length = 173

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 47/79 (59%)

Query: 7   IEGLGPYPSLLLLALPIATVEPLKLAAVALAGKGHWITGTAMIAACYAFSLLIVERLFVI 66
           +  L PY  L  LA+P    EP K+ A+ L   G W+TG  ++A  Y  SL++VER++  
Sbjct: 55  VAELPPYAILAALAIPFGLAEPAKIYALVLFAGGRWLTGVILMALAYLVSLVLVERIYDA 114

Query: 67  VKPKLLSISWFARLWEGFV 85
            + KL +ISWFARL +  V
Sbjct: 115 GRDKLRTISWFARLMDWLV 133


>ref|NP_945537.1| hypothetical protein RPA0184 [Rhodopseudomonas palustris CGA009]
 emb|CAE25628.1| hypothetical protein RPA0184 [Rhodopseudomonas palustris CGA009]
          Length = 180

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 51/88 (57%)

Query: 3   LRRSIEGLGPYPSLLLLALPIATVEPLKLAAVALAGKGHWITGTAMIAACYAFSLLIVER 62
           L R ++ L P  +L +  +P+A + PLKL A+AL  +GHW+ G  + AA   F L +   
Sbjct: 47  LARWVDHLSPAMTLPVFLVPVAPLYPLKLFALALIAQGHWVAGLGIFAAAQVFGLGVAAF 106

Query: 63  LFVIVKPKLLSISWFARLWEGFVFARAR 90
           +F + KPKLL + WFA  +   +  RA+
Sbjct: 107 IFDVTKPKLLQLRWFAATYRWVIELRAK 134


>ref|YP_001833417.1| hypothetical protein Bind_2315 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gb|ACB95928.1| hypothetical protein Bind_2315 [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 173

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 48/91 (52%)

Query: 1   MSLRRSIEGLGPYPSLLLLALPIATVEPLKLAAVALAGKGHWITGTAMIAACYAFSLLIV 60
           + L R I  L PY  L LLA+P    EP K+  + L G GH ++G   +   Y  S ++V
Sbjct: 51  LRLERLIADLSPYMILFLLAVPFGLAEPAKIYGLYLIGAGHVLSGIVTLVGAYLVSFVVV 110

Query: 61  ERLFVIVKPKLLSISWFARLWEGFVFARARL 91
           ER++   + KL  I WFA + +  +  R RL
Sbjct: 111 ERIYHAGEVKLRYIRWFAFVMDWLIHYRDRL 141


>ref|NP_774706.1| hypothetical protein blr8066 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53331.1| blr8066 [Bradyrhizobium japonicum USDA 110]
          Length = 171

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 44/76 (57%)

Query: 3   LRRSIEGLGPYPSLLLLALPIATVEPLKLAAVALAGKGHWITGTAMIAACYAFSLLIVER 62
           +RR +  LGPY S  L A+P+  +EP K  +  L G GH++ G  +  A     L +VER
Sbjct: 43  VRRWVTSLGPYQSFALFAVPVVILEPAKPLSAYLLGTGHFLPGAIVFIAAEVLKLTVVER 102

Query: 63  LFVIVKPKLLSISWFA 78
           LF + K KLLSI  FA
Sbjct: 103 LFHLNKKKLLSIPLFA 118