BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0218.0030.p (186 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773133.1| hypothetical protein blr6493 [Bradyrhizobium ja... 287 6e-76 gb|AAN40989.2| inner membrane protein [Bradyrhizobium japonicum] 251 4e-65 ref|NP_896089.1| hypothetical protein PMT2265 [Prochlorococcus m... 115 3e-24 ref|YP_001019008.1| hypothetical protein P9303_30131 [Prochloroc... 115 3e-24 ref|ZP_01470661.1| hypothetical protein RS9916_33152 [Synechococ... 110 9e-23 >ref|NP_773133.1| hypothetical protein blr6493 [Bradyrhizobium japonicum USDA 110] dbj|BAC51758.1| blr6493 [Bradyrhizobium japonicum USDA 110] Length = 222 Score = 287 bits (734), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 145/185 (78%), Positives = 158/185 (85%) Query: 1 LIGLSIWIAAMRQFEVEGVRMVIRFTARTSLLFFCLAFSAAALARLWPNAWTHWQRRNRR 60 LI LS+WIA+MRQFEVEGVRMVIRFTAR+SL+ FCLAF AAALARLWPNAWT WQRRNRR Sbjct: 37 LIVLSLWIASMRQFEVEGVRMVIRFTARSSLMLFCLAFGAAALARLWPNAWTRWQRRNRR 96 Query: 61 YLGVTFAASHAIQAVTIAAFAILDPPGFAAATSAVSYIFGGIGYAFIIALTATSFDRTAA 120 YLG++FAASHAI AV I AFA +DP GFA ATSA SYIFGGIGYAFIIA++ATSFDRTAA Sbjct: 97 YLGLSFAASHAIHAVAIVAFANMDPAGFAEATSAASYIFGGIGYAFIIAMSATSFDRTAA 156 Query: 121 MLGSCAWRRLHLIGGYYLLLQFMVSFGKRIPEMPLYALFLLPLAAVFALRMISMAGRPAP 180 +LG AWR LHL GGYYL LQFMVSFGKR+P MPLYA FLLPL AV ALR+I+MA P Sbjct: 157 LLGPRAWRALHLTGGYYLWLQFMVSFGKRVPAMPLYAAFLLPLLAVMALRLIAMAAHPRG 216 Query: 181 RQAQA 185 R A Sbjct: 217 RTVAA 221 >gb|AAN40989.2| inner membrane protein [Bradyrhizobium japonicum] Length = 206 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 132/185 (71%), Positives = 146/185 (78%) Query: 1 LIGLSIWIAAMRQFEVEGVRMVIRFTARTSLLFFCLAFSAAALARLWPNAWTHWQRRNRR 60 LI LS+WIA+MRQFEVEGVRMVIRFTAR+SL+ FCL + P T WQRRNRR Sbjct: 21 LIVLSLWIASMRQFEVEGVRMVIRFTARSSLMLFCLRSAPRLSPGSGPMPGTRWQRRNRR 80 Query: 61 YLGVTFAASHAIQAVTIAAFAILDPPGFAAATSAVSYIFGGIGYAFIIALTATSFDRTAA 120 YLG++FAASHAI AV I AFA +DP GFA ATSA SYIFGGIGYAFIIA++ATSFDRTAA Sbjct: 81 YLGLSFAASHAIHAVAIVAFANMDPAGFAEATSAASYIFGGIGYAFIIAMSATSFDRTAA 140 Query: 121 MLGSCAWRRLHLIGGYYLLLQFMVSFGKRIPEMPLYALFLLPLAAVFALRMISMAGRPAP 180 +LG AWR LHL GGYYL LQFMVSFGKR+P MPLYA FLLPL AV ALR+I+MA P Sbjct: 141 LLGPRAWRALHLTGGYYLWLQFMVSFGKRVPAMPLYAAFLLPLLAVMALRLIAMAAHPRG 200 Query: 181 RQAQA 185 R A Sbjct: 201 RTVAA 205 >ref|NP_896089.1| hypothetical protein PMT2265 [Prochlorococcus marinus str. MIT 9313] emb|CAE22439.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 204 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 1/168 (0%) Query: 17 EGVRMVIRFTARTSLLFFCLAFSAAALARLWPNAWTHWQRRNRRYLGVTFAASHAIQAVT 76 E ++ I +T R+SL F +AF+A+++ LW +T W RNRRY+G++FAASH I Sbjct: 35 ETIKAGIDYTGRSSLFLFSIAFTASSVYSLWKTPFTTWTLRNRRYIGLSFAASHFIHLSL 94 Query: 77 IAAFAILDPPGFAAATSAVSYIFGGIGYAFIIALTATSFDRTAAMLGSCAWRRLHLIGGY 136 I + L P F S +IFGG+GY F+ + TS DR +G W+RLHLIG + Sbjct: 95 IVLISFLFPEPFLEDQSMGQWIFGGLGYIFVFLMALTSTDRAQQWMGMKHWKRLHLIGSH 154 Query: 137 YLLLQFMVSFGKRIPEMP-LYALFLLPLAAVFALRMISMAGRPAPRQA 183 +L F++++ + E P Y FL+ A+ LR+I A A Sbjct: 155 WLWTVFLLTYVEHTREDPKFYIPFLVYTLALLPLRLIKHTPTKAAHGA 202 >ref|YP_001019008.1| hypothetical protein P9303_30131 [Prochlorococcus marinus str. MIT 9303] gb|ABM79743.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9303] Length = 187 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 95/168 (56%), Gaps = 1/168 (0%) Query: 17 EGVRMVIRFTARTSLLFFCLAFSAAALARLWPNAWTHWQRRNRRYLGVTFAASHAIQAVT 76 E ++ I +T R+SL F +AF+A+++ LW +T W RNRRY+G++FAASH I Sbjct: 18 ETIKAGIDYTGRSSLFLFSIAFTASSVYSLWKTPFTTWTLRNRRYIGLSFAASHFIHLSL 77 Query: 77 IAAFAILDPPGFAAATSAVSYIFGGIGYAFIIALTATSFDRTAAMLGSCAWRRLHLIGGY 136 I ++L P F S +IFGG+GY F+ + TS DR +G W+RLHLIG + Sbjct: 78 IILISLLFPEPFLEDQSMGQWIFGGLGYVFVFLMALTSTDRAQQWMGMKNWKRLHLIGSH 137 Query: 137 YLLLQFMVSFGKRIPEMP-LYALFLLPLAAVFALRMISMAGRPAPRQA 183 +L F++++ + E P Y FL+ A+ LR++ AP A Sbjct: 138 WLWTVFLLTYVEHTREDPKFYIPFLVYTLALLPLRLVKHTPTKAPHGA 185 >ref|ZP_01470661.1| hypothetical protein RS9916_33152 [Synechococcus sp. RS9916] gb|EAU74456.1| hypothetical protein RS9916_33152 [Synechococcus sp. RS9916] Length = 204 Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 66/177 (37%), Positives = 99/177 (55%), Gaps = 10/177 (5%) Query: 13 QFEVEG-----VRMVIRFTARTSLLFFCLAFSAAALARLWPNAWTHWQRRNRRYLGVTFA 67 F V G V+ I T R+SL F +AF A+++ RLWP++ + W +NRR++G++FA Sbjct: 25 HFGVSGWTSTSVKAGIDATGRSSLALFSIAFVASSVHRLWPSSLSQWMLQNRRWIGLSFA 84 Query: 68 ASHAIQAVTIAAFAILDPPGFAAATSAVSYIFGGIGYAFIIALTATSFDRTAAMLGSCAW 127 +SHAI V I A + P F + A ++ GGIGY F+ + TS + +G W Sbjct: 85 SSHAIHLVLIIAMSFDFPDPFLSGQPAGKWLLGGIGYLFVALMAMTSSNAAQHWMGMKHW 144 Query: 128 RRLHLIGGYYLLLQFMVSFGKRIPEMP--LYALFLLPLAAVFALRMISMAGRPAPRQ 182 +RLHLIG Y+L QF +++ I + P YA FL+ AL +I AG P++ Sbjct: 145 KRLHLIGSYWLWAQFFLTYVSHIKKGPADFYAPFLI---FTMALLVIRWAGHVRPKR 198