BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0218.0027.p (345 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004618696.1| Fe3+ ABC transporter periplasmic protein [Ra... 408 e-112 ref|YP_004154433.1| family 1 extracellular solute-binding protei... 162 1e-37 ref|ZP_08076011.1| ABC transporter, solute-binding protein [Phas... 142 7e-32 ref|YP_003692470.1| family 1 extracellular solute-binding protei... 140 3e-31 ref|YP_074975.1| ABC transporter substrate-binding protein [Symb... 136 4e-30 >ref|YP_004618696.1| Fe3+ ABC transporter periplasmic protein [Ramlibacter tataouinensis TTB310] gb|AEG92677.1| candidate ABC type Fe3+ transport system, periplasmic component [Ramlibacter tataouinensis TTB310] Length = 346 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 197/323 (60%), Positives = 246/323 (76%), Gaps = 3/323 (0%) Query: 22 APPAEPVTPTLIEAAKKEGQVVYYTSTDLPVAEKLARAFEAKYPDITVRVERTGAERVFQ 81 AP A TP L+ AA+KEG+VV+Y++TD+ VAEKLARAFEAKYP + V+VER+GAER+FQ Sbjct: 24 APAAYDATPQLVAAAQKEGKVVWYSATDVQVAEKLARAFEAKYPGVKVQVERSGAERIFQ 83 Query: 82 RVGQEYSSNIHAVDVVNSSDAAHFIVWKREGILAPYVPEEVAKYYPDEHRDADGQFASFR 141 R+ QEY S IHA DVV +SDA HFI +K++G L P VP +VAK++ +++DADGQ+A++R Sbjct: 84 RINQEYGSKIHAADVVETSDAVHFIYFKKQGWLTPAVPVDVAKHWGKDYKDADGQYAAYR 143 Query: 142 VWLSIIAYNTNLVKAEEAPQSFADLLDPKWKGKIVKAHPGYSGTIMTATYQM-QRDLGWS 200 LS+IAYNT LV E+AP+S ADLLDPKW KIVKAHPGYSGTIMT T + Q LGW Sbjct: 144 AHLSVIAYNTKLVPKEQAPKSHADLLDPKWNSKIVKAHPGYSGTIMTGTQALSQSPLGWK 203 Query: 201 FFEKLAKQNIMQVQSSTDPPKKLDLGERAVMADGNEYNIFQMKEAGRPVEPVYATEGSPI 260 + E+L KQ IMQVQSST+PPKKL GER VMADGNEYN+F +KE+G P+EPVYA EG+PI Sbjct: 204 YLEQLGKQKIMQVQSSTEPPKKLAAGERPVMADGNEYNVFILKESGVPIEPVYAAEGTPI 263 Query: 261 IVGPNGIFKDCPHPNAARLFQSFALGREGQQLNVEIGGLRSVHAQAKEKAGRRPLKDIKT 320 +VG I K+ P+PNAARLF F R+ QQLN ++GGLRS H + KEKAGR PL IK Sbjct: 264 VVGNAAIMKNAPNPNAARLFYHFMFTRDAQQLNSDVGGLRSFHPEVKEKAGRTPLSQIKL 323 Query: 321 MKDDPVAVEREGESIKSHYTRIF 343 + DP ++ ++IK Y F Sbjct: 324 LNSDPNKLDP--DNIKKKYEEYF 344 >ref|YP_004154433.1| family 1 extracellular solute-binding protein [Variovorax paradoxus EPS] gb|ADU36322.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] Length = 351 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 107/299 (35%), Positives = 163/299 (54%), Gaps = 8/299 (2%) Query: 32 LIEAAKKEGQVVYYTSTDLPV--AEKLARAFEAKYPDITVRVERTGAERVFQRVGQEYSS 89 L EAAKKEG++ +Y LP AE ++R F A+YP + V V RT A+ FQR+ Q+ + Sbjct: 36 LHEAAKKEGELTWYI-VYLPSEDAELMSRTFTARYPGVKVNVVRTTAQVAFQRLNQDLKA 94 Query: 90 NIHAVDVVNSSDAAHFIVWKREGILAPYVPEEVAKYYPD-EHRDADGQFASFRVWLSIIA 148 DV +S+D AH++ K+ +L YVP A ++ D DG + V + + Sbjct: 95 KTANCDVFSSTDIAHYLDLKKRKLLMKYVPAASATMDKRLQNLDPDGYYHVASVAMVGLV 154 Query: 149 YNTNLVKAEEAPQSFADLLDPKWKGKIVKAHPGYSGTIMTATYQMQRDLGWSFFEKLAKQ 208 YNT VKA +AP+S+ DL+DPKW+G HPG+SG + +M++ G +F+KLA Sbjct: 155 YNTQKVKAADAPKSWNDLVDPKWRGLASVGHPGFSGFVGVWAIEMRKLYGDGWFKKLAAN 214 Query: 209 NIMQVQSSTDPPKKLDLGERAVMADGNEYNIFQMKEAGRPVEPVYATEGSPIIVGPNGIF 268 +S D + GER++ A G M E G P+ V EG +++ P+ + Sbjct: 215 KPQVGRSIIDTVTTVTSGERSIGA-GPINLAAMMAEKGNPLAIVAPKEGPVLMLSPSAVM 273 Query: 269 KDCPHPNAARLFQSFALGREG-QQLNVEIGGLRSVHAQAKEKAGRRPLKDIKT-MKDDP 325 + PHPNA++LF + LG E +L+++ G+ A AK + G L D KT ++ DP Sbjct: 274 ANAPHPNASKLFMEWLLGSEDVDKLSIDRFGVPK-RAGAKPRPGVLGLDDSKTALRPDP 331 >ref|ZP_08076011.1| ABC transporter, solute-binding protein [Phascolarctobacterium sp. YIT 12067] gb|EFY05242.1| ABC transporter, solute-binding protein [Phascolarctobacterium sp. YIT 12067] Length = 345 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 161/319 (50%), Gaps = 6/319 (1%) Query: 2 LKGSGAVLAGAALSTRVLAAAPPAEPVTPTLIEAAKKEGQVVYYTSTDLPVAEKLARAFE 61 +K S +L AA+ +A A +AA +G ++ YTS + + + + Sbjct: 1 MKKSKWMLGAAAMLALSVALAGCGGGDKKADNKAAGVKGSLMVYTSIYPDIIDNMCKPNV 60 Query: 62 AK-YPDITVRVERTGAERVFQRVGQEYSSNIHAVDVVNSSDAAHFIVWKREGILAPYVPE 120 AK +PD+ V + G E+V ++ E + A DV+ +D ++++ + +G+L PY + Sbjct: 61 AKAFPDMKVNWFQGGTEKVITKITGEIKAKKIAADVLMVADPSYYLKLQEQGLLLPYKSK 120 Query: 121 EVAKYYPDEHRDADGQFASFRVWLSIIAYNTNLVKAEEAPQSFADLLDPKWKGKIVKAHP 180 E A + +D DG + R+ IIAYN+N +KAEEAP+++ DL DPKWKGKI +P Sbjct: 121 EDANVISE--KDKDGNWYGVRISNMIIAYNSNKLKAEEAPKNWTDLTDPKWKGKIAMPNP 178 Query: 181 GYSGTIMTATYQMQRDLGWSFFEKLAKQNIMQVQSSTDPPKKLDLGERAVMADGNEYNIF 240 SGT A + GW +F+KL + + ++ KL GE A + E NI Sbjct: 179 MLSGTAYVAVGALADKYGWEYFDKLKANGLRVEEGNSAIQNKLLTGEYAAVMILEE-NIL 237 Query: 241 QMKEAGR-PVEPVYATEGSPIIVGPNGIFKDCPHPNAARLFQSFALGREGQQLNVEIGGL 299 ++ + P++ VY T+G + P IFK+ +P A+ + L +EGQ+ V+ G + Sbjct: 238 KLANTKKEPLKIVYPTDGVINVPSPIAIFKETKNPEGAKALVDWWLSKEGQEAVVK-GWM 296 Query: 300 RSVHAQAKEKAGRRPLKDI 318 SV K G K I Sbjct: 297 HSVRGDVKAPTGAEETKKI 315 >ref|YP_003692470.1| family 1 extracellular solute-binding protein [Starkeya novella DSM 506] gb|ADH87851.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 345 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/335 (31%), Positives = 153/335 (45%), Gaps = 6/335 (1%) Query: 10 AGAALSTRVLAAAPPAEPVTPTLIEAAKKEGQVVYYTSTDLPVAEKLARAFEAKYPDITV 69 AGA L A A AE V + AK EG++V+YTST + A LA FE K I V Sbjct: 17 AGAGLLIGSFAFAASAEEVD---MAKAKAEGKLVWYTSTAIGQANNLALMFE-KQTGIKV 72 Query: 70 RVERTGAERVFQRVGQEYSSNIHAVDVVNSSDAAHFIVWKREGILAPYVPEEVAKYYPDE 129 + R+G + +R QE S+ A DV+ SD A +G + P++ K + Sbjct: 73 ELFRSGGSAILRRFMQEASAGKIAADVMTMSDPAAADQLSEKGTFVAFKPKDFDKI-TET 131 Query: 130 HRDADGQFASFRVWLSIIAYNTNLVKAEEAPQSFADLLDPKWKGKIVKAHPGYSGTIMTA 189 R+ DG + + R+ I + V E P+ + DL D K+ GK+V P ++ +T Sbjct: 132 ARNKDGYWIAQRLNAITIYMRGDKVPPAERPKKWTDLTDAKYDGKLVMTDPSFTSVQLTT 191 Query: 190 TYQMQRDLGWSFFEKLAKQNIMQVQSSTDPPKKLDLGERAVMADGNEYNIFQMKEAGRPV 249 + GW ++EKL +IM VQ + + GER + + I + G Sbjct: 192 VGVLADKYGWDYYEKLNDGDIMIVQGNQQVADNIKRGERLIAVGALDVYIAADRRNGHDF 251 Query: 250 EPVYATEGSPIIVGPNGIFKDCPHPNAARLFQSFALGREGQQLNVEIGGLRSVHAQAKEK 309 +Y +G+ +I P GI K PHPNAA+ F F + E Q+ E G S Sbjct: 252 VSIYPEDGTLLIPSPTGIIKGGPHPNAAKAFAEFMISPEAQKTFPETGEY-SARVDMAPP 310 Query: 310 AGRRPLKDIKTMKDDPVAVEREGESIKSHYTRIFR 344 AG + +IK M D +E + IK + IFR Sbjct: 311 AGNPKVDEIKLMPVDYEKLETQAAEIKEKFNDIFR 345 >ref|YP_074975.1| ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] dbj|BAD40131.1| ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 356 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 84/274 (30%), Positives = 138/274 (50%), Gaps = 3/274 (1%) Query: 42 VVYYTSTDLPVAEKLARAFEAKYPDITVRVERTGAERVFQRVGQEYSSNIHAVDVVNSSD 101 ++ YTS + ++ E +P++ V + G E+V ++ E + D++ +D Sbjct: 54 LMIYTSIYPDIINLVSPELEKAFPNLKVEWFQGGTEQVTAKLAAEIEAGKIGADLLMVAD 113 Query: 102 AAHFIVWKREGILAPYVPEEVAKYYPDEHRDADGQFASFRVWLSIIAYNTNLVKAEEAPQ 161 ++++ K + +L PY E D+ + D + R+ +I YNTNLVK E+AP+ Sbjct: 114 PSYYVYLKDQDLLLPYKSENFDAVAVDKDTE-DYAYTGVRISNVVIGYNTNLVKPEDAPK 172 Query: 162 SFADLLDPKWKGKIVKAHPGYSGTIMTATYQMQRDLGWSFFEKLAKQNIMQVQSSTDPPK 221 +F +L DPKWK ++V P SGT + +TY + GW +FE+L + ++ Sbjct: 173 TFRELTDPKWKDQVVIVDPTLSGTALVSTYALSEKYGWEYFEQLRDNGAVIGGGNSSVET 232 Query: 222 KLDLGERAVMADGNEYNIFQMKEAGRPVEPVYATEGSPIIVGPNGIFKDCPHPNAARLFQ 281 KL GE AV E N+ ++K+ G PVE VY +G I+ P GI K + AA+ Sbjct: 233 KLVTGEFAVAVILEE-NLLKVKDRGEPVEVVYPEDGVIIVPSPIGILKTTQNAEAAKAVV 291 Query: 282 SFALGREGQQLNVEIGGLRSVHAQAKEKAGRRPL 315 + L EGQ+ V G + SV + G +PL Sbjct: 292 DWWLSTEGQKAIV-TGWMHSVRTDVQSPKGAKPL 324