BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0218.0018.p         (74 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773315.1| hypothetical protein bsl6675 [Bradyrhizobium ja...    52   3e-05
ref|YP_001768845.1| hypothetical protein M446_1943 [Methylobacte...    41   0.050

>ref|NP_773315.1| hypothetical protein bsl6675 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51940.1| bsl6675 [Bradyrhizobium japonicum USDA 110]
          Length = 98

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%)

Query: 10 SIAFAVLWTCGMLWSSGKIDLANVIILSACGALAGVAWYYAMRWVFQLMHLARPSDPPAN 69
          +I F +LWT  M+W  G    A+V+IL+ CGA  G  WY AMRW F+ M +    D  + 
Sbjct: 37 AIIFTLLWTAWMMWWGGSFSSASVVILALCGAAVGYLWYRAMRWQFERMGMLPRKDDSSR 96


>ref|YP_001768845.1| hypothetical protein M446_1943 [Methylobacterium sp. 4-46]
 gb|ACA16411.1| hypothetical protein M446_1943 [Methylobacterium sp. 4-46]
          Length = 66

 Score = 41.2 bits (95), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 2  KPALLTFCSIAFAVLWTCGMLWSSGKIDLANVIILSACGALAGVAWYYAM-RW 53
          + A L + S+ FA+LWT  MLW S  ++ A V+I    GA+ G  W++ M RW
Sbjct: 3  EQARLRWISVVFALLWTAAMLWWSAPLEAAAVVIWIIAGAVVGFLWHWLMSRW 55