BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0218.0013.p         (157 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773310.1| hypothetical protein bll6670 [Bradyrhizobium ja...   147   6e-34
ref|YP_001203519.1| hypothetical protein BRADO1388 [Bradyrhizobi...    53   2e-05
ref|YP_002361147.1| heat shock protein DnaJ domain-containing pr...    52   2e-05
ref|YP_004515409.1| heat shock protein DnaJ domain-containing pr...    52   2e-05
ref|YP_001832624.1| heat shock protein DnaJ domain-containing pr...    52   3e-05

>ref|NP_773310.1| hypothetical protein bll6670 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51935.1| bll6670 [Bradyrhizobium japonicum USDA 110]
          Length = 169

 Score =  147 bits (370), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 76/154 (49%), Positives = 103/154 (66%), Gaps = 1/154 (0%)

Query: 1   MDPHIRHWKVAIERFCAAPDPDYREIAKMVAEIAATDIDETLRHAAAQVLPILRQAALKS 60
           M   +  WK+AIER  +A   D+ E  +++AEIA    D TLR AA Q LP+LRQ  + +
Sbjct: 1   MMERLESWKLAIERLRSAEPVDWAEAGRLIAEIARMSTDVTLRQAAEQALPVLRQT-VDN 59

Query: 61  ADRRTKAMALRRLGIVSDALHMLSAPRFGRRGLTPKALTQEEQYRQLLGLPFGRRLAATE 120
            DR     A RRLG+V D +H L+APRFGRR  TPK L+ E++ R++LGLP   +L   +
Sbjct: 60  DDRSVMLAAQRRLGVVLDVVHGLTAPRFGRRNATPKKLSSEDRARKVLGLPLAVQLTCDD 119

Query: 121 VQQAFKRAAKTVHPDGGGNGAAFLELAAARDALI 154
           + QA++RAAK +HPD GG+  AF++LAAARD LI
Sbjct: 120 INQAYRRAAKGMHPDRGGSAEAFIDLAAARDLLI 153


>ref|YP_001203519.1| hypothetical protein BRADO1388 [Bradyrhizobium sp. ORS 278]
 emb|CAL75282.1| hypothetical protein; partial homology with benzene monooxygenase
           ferredoxin [Bradyrhizobium sp. ORS 278]
          Length = 287

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)

Query: 101 EEQYRQLLGLPFGRRLAATEVQQAFKRAAKTVHPDGGGNGAAFLELAAARDALI 154
           +E YR LL LP   RL A E+   F+R AK+ HPD GG+   +  ++ AR+AL+
Sbjct: 230 DEAYRALLNLPLQGRLTAMEINAGFRRLAKSAHPDAGGSNELYRRISEAREALL 283


>ref|YP_002361147.1| heat shock protein DnaJ domain-containing protein [Methylocella
           silvestris BL2]
 gb|ACK49785.1| heat shock protein DnaJ domain protein [Methylocella silvestris
           BL2]
          Length = 163

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query: 101 EEQYRQLLGLPFGRRLAATEVQQAFKRAAKTVHPDGGGNGAAFLELAAARDALIK 155
           ++++R++L LP    L  TE+  AF+R AK+ HPD GG+G  +  +  ARDAL++
Sbjct: 103 DQEHREVLNLPAEGELTPTEINAAFRRMAKSAHPDAGGSGEQYRRITEARDALMQ 157


>ref|YP_004515409.1| heat shock protein DnaJ domain-containing protein [Methylomonas
           methanica MC09]
 gb|AEG02910.1| heat shock protein DnaJ domain protein [Methylomonas methanica
           MC09]
          Length = 176

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 35/54 (64%)

Query: 101 EEQYRQLLGLPFGRRLAATEVQQAFKRAAKTVHPDGGGNGAAFLELAAARDALI 154
           E Q+RQ L LP    L ++E++ AF+R A+  HPD GG+   F+ +  AR+AL+
Sbjct: 119 ERQHRQALNLPIEGMLQSSEIKAAFRRLAQKAHPDAGGSNEQFIRITEARNALL 172


>ref|YP_001832624.1| heat shock protein DnaJ domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gb|ACB95135.1| heat shock protein DnaJ domain protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 162

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%)

Query: 98  LTQEEQYRQLLGLPFGRRLAATEVQQAFKRAAKTVHPDGGGNGAAFLELAAARDALIKH 156
              E+++R++L LP    L ++E+  AF+R AK  HPD GG+   +  +A ARDAL++ 
Sbjct: 99  FEDEQEHREVLNLPMEGPLTSSEINGAFRRMAKIAHPDAGGSDEDYRRIAEARDALLEQ 157