BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0218.0011.p         (146 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08631000.1| hypothetical protein CSIRO_4111 [Bradyrhizobi...   179   2e-43
ref|YP_578126.1| hypothetical protein Nham_2898 [Nitrobacter ham...   174   3e-42
ref|ZP_01046963.1| hypothetical protein NB311A_14255 [Nitrobacte...   174   5e-42
ref|YP_001207605.1| hypothetical protein BRADO5720 [Bradyrhizobi...   159   1e-37
ref|YP_001242061.1| hypothetical protein BBta_6232 [Bradyrhizobi...   154   6e-36

>ref|ZP_08631000.1| hypothetical protein CSIRO_4111 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP06300.1| hypothetical protein CSIRO_4111 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 145

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/146 (78%), Positives = 125/146 (85%), Gaps = 1/146 (0%)

Query: 1   MKPSSTLRAALVALLAFTGLAFSSAARADSGFVTLTIYKAGWIIGGSGGGGVLTFRGRSY 60
           M+  S +RA L+A+ A  G   SSA  ADSG V+L IYKAGW IGGSGG G L FRGR+Y
Sbjct: 1   MRLPSAIRAMLIAITALAGAGLSSA-HADSGRVSLVIYKAGWFIGGSGGTGTLNFRGRNY 59

Query: 61  RLSTGGLDYGLVFGGSKTVLRGRVSNINRPSDVAGVYGAAGAGLAVGRGARAIVLTNQKG 120
            LSTGG+DYGLVFGGSKTVLRGRVSNINRPSDVAGVYGAAGAG+AVGRGARAIVLTNQKG
Sbjct: 60  ALSTGGIDYGLVFGGSKTVLRGRVSNINRPSDVAGVYGAAGAGIAVGRGARAIVLTNQKG 119

Query: 121 AVLELTGHQVGLMANADLSGLAITMR 146
           AVLEL+G Q GLMANADLSGLAIT++
Sbjct: 120 AVLELSGQQTGLMANADLSGLAITLK 145


>ref|YP_578126.1| hypothetical protein Nham_2898 [Nitrobacter hamburgensis X14]
 gb|ABE63666.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 144

 Score =  174 bits (441), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/145 (81%), Positives = 124/145 (85%), Gaps = 3/145 (2%)

Query: 3   PSSTL-RAALVALLAFTGLAFSSAARADSGFVTLTIYKAGWIIGGSGGGGVLTFRGRSYR 61
           PSS L RA L AL    GL  S+AARADSG VTLTIYK GWIIG SGGGG LTFR R Y 
Sbjct: 2   PSSPLFRAVLFALAICFGL--STAARADSGAVTLTIYKGGWIIGASGGGGTLTFRSRRYP 59

Query: 62  LSTGGLDYGLVFGGSKTVLRGRVSNINRPSDVAGVYGAAGAGLAVGRGARAIVLTNQKGA 121
           LS GGLDYGLVFGGSKTVLRGRVS+I+RPSDVAGVYGAAGAGLA+G GARAIVLTNQKGA
Sbjct: 60  LSIGGLDYGLVFGGSKTVLRGRVSHISRPSDVAGVYGAAGAGLAIGGGARAIVLTNQKGA 119

Query: 122 VLELTGHQVGLMANADLSGLAITMR 146
           VLEL+G Q GLMANADLSGLAITM+
Sbjct: 120 VLELSGRQYGLMANADLSGLAITMK 144


>ref|ZP_01046963.1| hypothetical protein NB311A_14255 [Nitrobacter sp. Nb-311A]
 gb|EAQ35065.1| hypothetical protein NB311A_14255 [Nitrobacter sp. Nb-311A]
          Length = 144

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/146 (79%), Positives = 121/146 (82%), Gaps = 2/146 (1%)

Query: 1   MKPSSTLRAALVALLAFTGLAFSSAARADSGFVTLTIYKAGWIIGGSGGGGVLTFRGRSY 60
           M  SS  RAAL AL    GL  S+AA ADSG VTLTIYK GWIIG SGGGG LTF GR Y
Sbjct: 1   MSSSSLCRAALFALAICFGL--STAASADSGAVTLTIYKGGWIIGASGGGGTLTFHGRRY 58

Query: 61  RLSTGGLDYGLVFGGSKTVLRGRVSNINRPSDVAGVYGAAGAGLAVGRGARAIVLTNQKG 120
            LS GGLDYGLVFGGSKTVL GRVS INRPSDVAGVYGAAGAGLA+G GARAIVL+NQKG
Sbjct: 59  PLSVGGLDYGLVFGGSKTVLHGRVSRINRPSDVAGVYGAAGAGLAIGGGARAIVLSNQKG 118

Query: 121 AVLELTGHQVGLMANADLSGLAITMR 146
           AVLEL+G Q GLMANADLSGLAITM+
Sbjct: 119 AVLELSGRQFGLMANADLSGLAITMK 144


>ref|YP_001207605.1| hypothetical protein BRADO5720 [Bradyrhizobium sp. ORS 278]
 emb|CAL79388.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 146

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/146 (78%), Positives = 125/146 (85%)

Query: 1   MKPSSTLRAALVALLAFTGLAFSSAARADSGFVTLTIYKAGWIIGGSGGGGVLTFRGRSY 60
           M  +S LR  LVAL+A TG    + ARAD GF+TLTIYKAGWIIGGSGG GVL+F GR+Y
Sbjct: 1   MNIASLLRGLLVALVAATGAILPATARADGGFITLTIYKAGWIIGGSGGSGVLSFHGRAY 60

Query: 61  RLSTGGLDYGLVFGGSKTVLRGRVSNINRPSDVAGVYGAAGAGLAVGRGARAIVLTNQKG 120
            LSTGG+DYGLVFGGS+TVLRGRVSNI RPSDV GVYGAAGAGLAVGRG R IVLTNQKG
Sbjct: 61  PLSTGGIDYGLVFGGSRTVLRGRVSNIWRPSDVEGVYGAAGAGLAVGRGVRGIVLTNQKG 120

Query: 121 AVLELTGHQVGLMANADLSGLAITMR 146
           AVLEL+G QVGL+AN DLSGLAIT+R
Sbjct: 121 AVLELSGEQVGLLANVDLSGLAITIR 146


>ref|YP_001242061.1| hypothetical protein BBta_6232 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38155.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 146

 Score =  154 bits (388), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/146 (76%), Positives = 122/146 (83%)

Query: 1   MKPSSTLRAALVALLAFTGLAFSSAARADSGFVTLTIYKAGWIIGGSGGGGVLTFRGRSY 60
           MK +S LR  LVAL A  G    + A AD GF+TLTIYKAGWIIGGSGG G+L F GR+Y
Sbjct: 1   MKIASFLRGMLVALTAAAGAVLPTTAHADGGFITLTIYKAGWIIGGSGGSGMLHFHGRAY 60

Query: 61  RLSTGGLDYGLVFGGSKTVLRGRVSNINRPSDVAGVYGAAGAGLAVGRGARAIVLTNQKG 120
            LSTGGLD+GLVFGGS+TVLRGRVSNI RPSDV GVYGAAGAGLAVGRG R IVLTNQKG
Sbjct: 61  PLSTGGLDWGLVFGGSRTVLRGRVSNIWRPSDVEGVYGAAGAGLAVGRGVRGIVLTNQKG 120

Query: 121 AVLELTGHQVGLMANADLSGLAITMR 146
           AVLEL+G Q+GL+AN DLSGLAIT+R
Sbjct: 121 AVLELSGEQIGLLANVDLSGLAITIR 146