BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0218.0008.p (379 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769209.1| FAD dependent oxidoreductase [Bradyrhizobium ja... 679 0.0 ref|YP_001238461.1| putative D-lactate ferricytochrome C oxidore... 650 0.0 ref|YP_001204151.1| putative D-lactate ferricytochrome C oxidore... 641 0.0 ref|YP_004107601.1| FAD linked oxidase domain-containing protein... 622 e-176 ref|YP_484752.1| FAD linked oxidase-like [Rhodopseudomonas palus... 619 e-175 >ref|NP_769209.1| FAD dependent oxidoreductase [Bradyrhizobium japonicum USDA 110] dbj|BAC47834.1| FAD dependent oxidoreductase [Bradyrhizobium japonicum USDA 110] Length = 475 Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/379 (86%), Positives = 358/379 (94%) Query: 1 VVSLRRLDKIRDIDVESNTMTCEAGVVLQIAQQKAAEVDRLFPLSLGAEGSCTIGGNLST 60 VVSLRRLDKIR++D SNTMTCEAGVVLQIAQQKA++VDRLFPLSLGAEGSCTIGGNLST Sbjct: 97 VVSLRRLDKIREVDTASNTMTCEAGVVLQIAQQKASDVDRLFPLSLGAEGSCTIGGNLST 156 Query: 61 NAGGTGALAYGVAREMALGVEVVLADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIIT 120 NAGGT ALAYGVAREMALG+EVVLADGRVLN LSKLKKDNTGY+L NLFIGAEGTLGIIT Sbjct: 157 NAGGTAALAYGVAREMALGLEVVLADGRVLNVLSKLKKDNTGYNLHNLFIGAEGTLGIIT 216 Query: 121 AATLKLFPRPRAVETAYVGLKSPAAALKLLSISRDQAAGALTSFELLADVAVDFSIRHGI 180 AATLKLFP+PRAVETA+VGLKSPAAALKLL+I++ +AA ALTSFELL+++AVDFS+RHGI Sbjct: 217 AATLKLFPKPRAVETAFVGLKSPAAALKLLTIAQGEAANALTSFELLSEMAVDFSVRHGI 276 Query: 181 DIRDPLTSKHPWYVLMELSSSRDDARDTLEAILAQGMEDGIVDDAVIAANLSQRQAFWKL 240 D+RDPL KHPWYVLMELSS DDAR LE IL + ME+GIVDDAVIAANLSQR FWKL Sbjct: 277 DVRDPLAEKHPWYVLMELSSPGDDARTPLETILTRAMEEGIVDDAVIAANLSQRNGFWKL 336 Query: 241 RDEMSAAQKPEGGSIKHDISVPVAAVPAFIEEANAAVVKLIPGSRPVPFGHLGDGNIHYN 300 R+EMS+AQKPEGGSIKHDISVPVAAVPAFI+EANAAVVKLIPG+RPVPFGHLGDGN+HYN Sbjct: 337 REEMSSAQKPEGGSIKHDISVPVAAVPAFIDEANAAVVKLIPGARPVPFGHLGDGNLHYN 396 Query: 301 VSQPVGANAADFLARWHDVNAVVFEIVLRMGGSISAEHGIGVLKRDELPDVKDKVAIELM 360 +SQP+GA+ AD+LARWH++NAVVFEIVLRMGGSISAEHGIGVLKRDELP+VKDK AIELM Sbjct: 397 ISQPIGADTADYLARWHEMNAVVFEIVLRMGGSISAEHGIGVLKRDELPEVKDKTAIELM 456 Query: 361 RQVKAMLDPLGIMNPGKVL 379 R +KAMLDPLGIMNPGKVL Sbjct: 457 RAIKAMLDPLGIMNPGKVL 475 >ref|YP_001238461.1| putative D-lactate ferricytochrome C oxidoreductase [Bradyrhizobium sp. BTAi1] gb|ABQ34555.1| 4-phosphoerythronate dehydrogenase (FAD-dependent) [Bradyrhizobium sp. BTAi1] Length = 475 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/379 (83%), Positives = 347/379 (91%) Query: 1 VVSLRRLDKIRDIDVESNTMTCEAGVVLQIAQQKAAEVDRLFPLSLGAEGSCTIGGNLST 60 VVSL+R+DKIRD+D SNTM EAGVVLQ+AQQKAAEVDRLFPLSLGAEGSCTIGGNLST Sbjct: 97 VVSLKRMDKIRDVDTASNTMIAEAGVVLQVAQQKAAEVDRLFPLSLGAEGSCTIGGNLST 156 Query: 61 NAGGTGALAYGVAREMALGVEVVLADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIIT 120 NAGGT ALAYGVAREMALG+EVVLADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIIT Sbjct: 157 NAGGTAALAYGVAREMALGLEVVLADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIIT 216 Query: 121 AATLKLFPRPRAVETAYVGLKSPAAALKLLSISRDQAAGALTSFELLADVAVDFSIRHGI 180 AA+LKLFP+PRA+ETA+VGLKSP ALKLL+I++ +AAG+LTSFEL+A +A+DFSIRH Sbjct: 217 AASLKLFPKPRAIETAFVGLKSPEDALKLLAIAQAEAAGSLTSFELIAQIALDFSIRHVA 276 Query: 181 DIRDPLTSKHPWYVLMELSSSRDDARDTLEAILAQGMEDGIVDDAVIAANLSQRQAFWKL 240 R PL+S HPW+VLMELSSSRDDAR TLE+IL QG E GIVDDAVIA NL+QR AFWKL Sbjct: 277 GNRAPLSSPHPWFVLMELSSSRDDARATLESILEQGFESGIVDDAVIADNLAQRMAFWKL 336 Query: 241 RDEMSAAQKPEGGSIKHDISVPVAAVPAFIEEANAAVVKLIPGSRPVPFGHLGDGNIHYN 300 R+++S AQKPEGGSIKHDISVPVAAVPAFI EAN AVVK +PG+RPVPFGHLGDGNIHYN Sbjct: 337 REDISWAQKPEGGSIKHDISVPVAAVPAFIAEANEAVVKTVPGARPVPFGHLGDGNIHYN 396 Query: 301 VSQPVGANAADFLARWHDVNAVVFEIVLRMGGSISAEHGIGVLKRDELPDVKDKVAIELM 360 VSQP+GA+ AD+LARWH+VNAVVFEIVLRMGGSISAEHGIGVLKRDELPDVKD AI LM Sbjct: 397 VSQPIGADTADYLARWHEVNAVVFEIVLRMGGSISAEHGIGVLKRDELPDVKDPTAIALM 456 Query: 361 RQVKAMLDPLGIMNPGKVL 379 R +KA DPLGIMNPGKVL Sbjct: 457 RAIKAQFDPLGIMNPGKVL 475 >ref|YP_001204151.1| putative D-lactate ferricytochrome C oxidoreductase [Bradyrhizobium sp. ORS 278] emb|CAL75914.1| putative D-lactate ferricytochrome C oxidoreductase [Bradyrhizobium sp. ORS 278] Length = 475 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/379 (82%), Positives = 343/379 (90%) Query: 1 VVSLRRLDKIRDIDVESNTMTCEAGVVLQIAQQKAAEVDRLFPLSLGAEGSCTIGGNLST 60 VVSL+R+D+IRD+D SNTM EAGVVLQ+AQQKAAEVDRLFPLSLGAEGSCTIGGNLST Sbjct: 97 VVSLKRMDRIRDVDTASNTMIAEAGVVLQVAQQKAAEVDRLFPLSLGAEGSCTIGGNLST 156 Query: 61 NAGGTGALAYGVAREMALGVEVVLADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIIT 120 NAGGT ALAYGVAREMALGVEVVLADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIIT Sbjct: 157 NAGGTAALAYGVAREMALGVEVVLADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIIT 216 Query: 121 AATLKLFPRPRAVETAYVGLKSPAAALKLLSISRDQAAGALTSFELLADVAVDFSIRHGI 180 AA+LKLFP+PRA+ETA+VGLKSP ALKLLSI++ +AAG+LTSFEL+A +A+ FSIRH Sbjct: 217 AASLKLFPKPRAIETAFVGLKSPEDALKLLSIAQREAAGSLTSFELIAQIALAFSIRHVS 276 Query: 181 DIRDPLTSKHPWYVLMELSSSRDDARDTLEAILAQGMEDGIVDDAVIAANLSQRQAFWKL 240 R PL+ HPW+VLMELSSSRDDAR TLE IL QG E IVDDAVIA NL+QR AFWKL Sbjct: 277 GNRAPLSGPHPWFVLMELSSSRDDARATLETILEQGFEASIVDDAVIAENLTQRMAFWKL 336 Query: 241 RDEMSAAQKPEGGSIKHDISVPVAAVPAFIEEANAAVVKLIPGSRPVPFGHLGDGNIHYN 300 R+++S AQKPEGGSIKHDISVPVAAVPAFI EAN AVV+ +PG+RPVPFGHLGDGNIHYN Sbjct: 337 REDISWAQKPEGGSIKHDISVPVAAVPAFIAEANEAVVRKVPGARPVPFGHLGDGNIHYN 396 Query: 301 VSQPVGANAADFLARWHDVNAVVFEIVLRMGGSISAEHGIGVLKRDELPDVKDKVAIELM 360 VSQP+GA+ AD+LARWH+VN+VVFEIVLRMGGSISAEHGIGVLKRDELPDVKD AI LM Sbjct: 397 VSQPIGADTADYLARWHEVNSVVFEIVLRMGGSISAEHGIGVLKRDELPDVKDPTAIALM 456 Query: 361 RQVKAMLDPLGIMNPGKVL 379 R +KA DPLGIMNPGKVL Sbjct: 457 RAIKAQFDPLGIMNPGKVL 475 >ref|YP_004107601.1| FAD linked oxidase domain-containing protein [Rhodopseudomonas palustris DX-1] gb|ADU42868.1| FAD linked oxidase domain protein [Rhodopseudomonas palustris DX-1] Length = 475 Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust. Identities = 300/379 (79%), Positives = 344/379 (90%), Gaps = 1/379 (0%) Query: 1 VVSLRRLDKIRDIDVESNTMTCEAGVVLQIAQQKAAEVDRLFPLSLGAEGSCTIGGNLST 60 V+SL+R+DKIR++D SNTMT EAGV+LQ AQ+KAAEVDRLFPLSLGA+GSCTIGGNLST Sbjct: 98 VISLKRMDKIREVDTSSNTMTVEAGVILQRAQEKAAEVDRLFPLSLGAQGSCTIGGNLST 157 Query: 61 NAGGTGALAYGVAREMALGVEVVLADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIIT 120 NAGGT ALAYG+AR+MALGVEVVLADGRVLN LSKLKKDNTGYDLRNLFIGAEGTLGIIT Sbjct: 158 NAGGTAALAYGLARDMALGVEVVLADGRVLNLLSKLKKDNTGYDLRNLFIGAEGTLGIIT 217 Query: 121 AATLKLFPRPRAVETAYVGLKSPAAALKLLSISRDQAAGALTSFELLADVAVDFSIRHGI 180 AATLKLFP+PRAVETA+VGL+SP ALKLL I++ +AAG LTSFEL+A+ +DFS+RH Sbjct: 218 AATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQAEAAGNLTSFELIAETPLDFSVRHAN 277 Query: 181 DIRDPLTSKHPWYVLMELSSSRDDARDTLEAILAQGMEDGIVDDAVIAANLSQRQAFWKL 240 + RDPL +++PWYVL+ELSS RDDAR LE+IL +G EDGIV DA IA+++ Q+QAFWKL Sbjct: 278 N-RDPLEARYPWYVLIELSSPRDDARAALESILERGFEDGIVVDAAIASSVQQQQAFWKL 336 Query: 241 RDEMSAAQKPEGGSIKHDISVPVAAVPAFIEEANAAVVKLIPGSRPVPFGHLGDGNIHYN 300 R+E+S AQKPEGGSIKHDISVPVAAVP FIE+ANAAVV LIPG+RPVPFGHLGDGNIHYN Sbjct: 337 REEISPAQKPEGGSIKHDISVPVAAVPQFIEQANAAVVALIPGARPVPFGHLGDGNIHYN 396 Query: 301 VSQPVGANAADFLARWHDVNAVVFEIVLRMGGSISAEHGIGVLKRDELPDVKDKVAIELM 360 VSQPVGA+ A+FLARWHDVN VVFE+VLR+GGSISAEHGIGV+KRDEL +VKDK AIELM Sbjct: 397 VSQPVGADKAEFLARWHDVNKVVFEVVLRLGGSISAEHGIGVMKRDELAEVKDKTAIELM 456 Query: 361 RQVKAMLDPLGIMNPGKVL 379 R +K +LDP GIMNPGKV+ Sbjct: 457 RSIKTLLDPHGIMNPGKVV 475 >ref|YP_484752.1| FAD linked oxidase-like [Rhodopseudomonas palustris HaA2] gb|ABD05841.1| FAD linked oxidase-like [Rhodopseudomonas palustris HaA2] Length = 475 Score = 619 bits (1595), Expect = e-175, Method: Compositional matrix adjust. Identities = 298/379 (78%), Positives = 346/379 (91%), Gaps = 1/379 (0%) Query: 1 VVSLRRLDKIRDIDVESNTMTCEAGVVLQIAQQKAAEVDRLFPLSLGAEGSCTIGGNLST 60 VVSL+R+DKIRDID+ SNTMT EAGV+LQ AQ++AA+VDRLFPLSLGA+GSCTIGGNLST Sbjct: 98 VVSLKRMDKIRDIDLASNTMTVEAGVILQHAQERAADVDRLFPLSLGAQGSCTIGGNLST 157 Query: 61 NAGGTGALAYGVAREMALGVEVVLADGRVLNALSKLKKDNTGYDLRNLFIGAEGTLGIIT 120 NAGGT ALAYG+AR+MALG+EVVLADGR+L+ LSKLKKDNTGYDLR+LFIGAEGTLGIIT Sbjct: 158 NAGGTAALAYGLARDMALGIEVVLADGRILDLLSKLKKDNTGYDLRDLFIGAEGTLGIIT 217 Query: 121 AATLKLFPRPRAVETAYVGLKSPAAALKLLSISRDQAAGALTSFELLADVAVDFSIRHGI 180 AATLKLFP+PRAV TA+VGL SPA ALKLL I++ +AAG LTSFEL+A++A+DFS+RH Sbjct: 218 AATLKLFPKPRAVATAFVGLPSPADALKLLGIAQAEAAGHLTSFELIAEIALDFSVRHAA 277 Query: 181 DIRDPLTSKHPWYVLMELSSSRDDARDTLEAILAQGMEDGIVDDAVIAANLSQRQAFWKL 240 + RDPL S+HPWYVL+ELSS RDDA LEAIL QG E GIV DA IAA+L+Q+QAFWKL Sbjct: 278 N-RDPLESRHPWYVLIELSSMRDDASGALEAILEQGFEAGIVTDAAIAASLAQQQAFWKL 336 Query: 241 RDEMSAAQKPEGGSIKHDISVPVAAVPAFIEEANAAVVKLIPGSRPVPFGHLGDGNIHYN 300 R+E+S AQKPEGGSIKHD+SVP+AAVP FIE+ANAAVVKLIPG+RPVPFGHLGDGNIHYN Sbjct: 337 REEISPAQKPEGGSIKHDVSVPIAAVPEFIEQANAAVVKLIPGARPVPFGHLGDGNIHYN 396 Query: 301 VSQPVGANAADFLARWHDVNAVVFEIVLRMGGSISAEHGIGVLKRDELPDVKDKVAIELM 360 V+QP+GA+ A +LARWH+VN VVF++VLR+GGSISAEHGIGVLKRD+LP VKDK AI+LM Sbjct: 397 VTQPLGADKAAYLARWHEVNKVVFDVVLRLGGSISAEHGIGVLKRDDLPAVKDKTAIDLM 456 Query: 361 RQVKAMLDPLGIMNPGKVL 379 R +KA LDPLGIMNPGKV+ Sbjct: 457 RAIKATLDPLGIMNPGKVV 475