BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0217.0028.p (276 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001237080.1| putative ABC transporter permease [Bradyrhiz... 511 e-143 ref|YP_003692780.1| binding-protein-dependent transporters inner... 494 e-138 ref|YP_001328023.1| binding-protein-dependent transport systems ... 440 e-121 ref|YP_002826982.1| putative mannitol transmembrane permease com... 440 e-121 ref|YP_002977532.1| ABC transporter inner membrane protein [Rhiz... 439 e-121 >ref|YP_001237080.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ33174.1| sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein [Bradyrhizobium sp. BTAi1] Length = 276 Score = 511 bits (1317), Expect = e-143, Method: Compositional matrix adjust. Identities = 250/276 (90%), Positives = 264/276 (95%) Query: 1 MARMVTTRRKVISTVAAWLVGFLIFFPILWMVLASFKTELEAFAIPPSFLFFHWTTENYA 60 MAR VT R IST+AAWL GF+IFFPILWMVLASFKTELEAFA PPSFLFFHWTTENYA Sbjct: 1 MARKVTGRHVAISTLAAWLAGFVIFFPILWMVLASFKTELEAFATPPSFLFFHWTTENYA 60 Query: 61 TVQERSDYFHHALNSIIIAGGSTLIAMLIAIPAAWSMAFSPTKRTKDVLLWMLSTKMMPP 120 TVQERSDY HHALNS+I+AGGSTLIAMLIAIPAAWSMAFSPTKRTKD+LLWMLSTKMMPP Sbjct: 61 TVQERSDYLHHALNSLIVAGGSTLIAMLIAIPAAWSMAFSPTKRTKDILLWMLSTKMMPP 120 Query: 121 VGVLVPIYLIYRTFGLLDTRSGLIFILCLGNLPIVIWMLFTYFKEIPKDILEAARMDGAT 180 VGVLVPIYLIY+ GLLDTR+GL+FILCLGNLPIVIWMLFTYFKEIPKDILEAARMDGAT Sbjct: 121 VGVLVPIYLIYKNMGLLDTRTGLVFILCLGNLPIVIWMLFTYFKEIPKDILEAARMDGAT 180 Query: 181 IGRELIYVLTPMAVPGLASTLLLNLILAWNEAFWTLNLSTLEAAPLTVFIASYSSPEGLF 240 IGRELIYVLTPMA+PGLASTLLLNLILAWNEAFWTLNLSTL AAPLT FIASYSSPEGLF Sbjct: 181 IGRELIYVLTPMAIPGLASTLLLNLILAWNEAFWTLNLSTLNAAPLTTFIASYSSPEGLF 240 Query: 241 WAKLSAASTLAIAPILVLGWFSQRQLVRGLTFGAVR 276 WA+LSAASTLAIAPIL++GWFSQ+QLVRGLTFGAV+ Sbjct: 241 WARLSAASTLAIAPILIIGWFSQKQLVRGLTFGAVK 276 >ref|YP_003692780.1| binding-protein-dependent transporters inner membrane component [Starkeya novella DSM 506] gb|ADH88161.1| binding-protein-dependent transport systems inner membrane component [Starkeya novella DSM 506] Length = 276 Score = 494 bits (1273), Expect = e-138, Method: Compositional matrix adjust. Identities = 241/276 (87%), Positives = 261/276 (94%) Query: 1 MARMVTTRRKVISTVAAWLVGFLIFFPILWMVLASFKTELEAFAIPPSFLFFHWTTENYA 60 MAR + R +ST+AAW VGFLIFFPILWMVL SFKTELEAF+ PPSFLFFHWTTENYA Sbjct: 1 MARRDSASRVFVSTLAAWAVGFLIFFPILWMVLTSFKTELEAFSTPPSFLFFHWTTENYA 60 Query: 61 TVQERSDYFHHALNSIIIAGGSTLIAMLIAIPAAWSMAFSPTKRTKDVLLWMLSTKMMPP 120 TVQERSDY HA+NS+IIAGGSTLIA+LIA+PAAWSMAF+PTKRTKDVLLWMLSTKM+PP Sbjct: 61 TVQERSDYVAHAMNSLIIAGGSTLIALLIAVPAAWSMAFAPTKRTKDVLLWMLSTKMLPP 120 Query: 121 VGVLVPIYLIYRTFGLLDTRSGLIFILCLGNLPIVIWMLFTYFKEIPKDILEAARMDGAT 180 VGVLVPIYLI+R FGLLD+R+GLI +LCLGNLPIV+WMLFTYFKEIPKDILEAARMDGAT Sbjct: 121 VGVLVPIYLIFRDFGLLDSRTGLILVLCLGNLPIVVWMLFTYFKEIPKDILEAARMDGAT 180 Query: 181 IGRELIYVLTPMAVPGLASTLLLNLILAWNEAFWTLNLSTLEAAPLTVFIASYSSPEGLF 240 +G+ELIYVLTPMAVPG+ASTLLLN ILAWNEAFWTLNL+T EAAPLTVFIASYSSPEGLF Sbjct: 181 VGKELIYVLTPMAVPGIASTLLLNFILAWNEAFWTLNLTTSEAAPLTVFIASYSSPEGLF 240 Query: 241 WAKLSAASTLAIAPILVLGWFSQRQLVRGLTFGAVR 276 WAKLSAASTLAIAPILVLGWFSQRQLVRGLTFGAV+ Sbjct: 241 WAKLSAASTLAIAPILVLGWFSQRQLVRGLTFGAVK 276 >ref|YP_001328023.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] gb|ABR61188.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] Length = 276 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 211/276 (76%), Positives = 247/276 (89%) Query: 1 MARMVTTRRKVISTVAAWLVGFLIFFPILWMVLASFKTELEAFAIPPSFLFFHWTTENYA 60 MAR V+T RK+I+TV AW +G LIFFPILW L SFKTE +A A PP FLFF WTTENYA Sbjct: 1 MARNVSTGRKLITTVVAWTIGILIFFPILWTFLTSFKTEAQAIASPPVFLFFDWTTENYA 60 Query: 61 TVQERSDYFHHALNSIIIAGGSTLIAMLIAIPAAWSMAFSPTKRTKDVLLWMLSTKMMPP 120 VQ RSDY H +NS+I++ GSTL+ +LIAIP+AW+MAFSPTKRTKDVL+WMLSTKMMPP Sbjct: 61 EVQSRSDYLKHFMNSVIVSFGSTLLGLLIAIPSAWAMAFSPTKRTKDVLMWMLSTKMMPP 120 Query: 121 VGVLVPIYLIYRTFGLLDTRSGLIFILCLGNLPIVIWMLFTYFKEIPKDILEAARMDGAT 180 VGVLVP+YLI+R +GLLDTR+GL+ +L L NLPI+IWML+TYFKEIP +ILEAARMDGA+ Sbjct: 121 VGVLVPMYLIFRNWGLLDTRTGLVIVLTLINLPIIIWMLYTYFKEIPGEILEAARMDGAS 180 Query: 181 IGRELIYVLTPMAVPGLASTLLLNLILAWNEAFWTLNLSTLEAAPLTVFIASYSSPEGLF 240 + +E+IYVLTPMA+PG+ASTLLLN+ILAWNEAFWTLNLS +AAPLT FIASYSSPEGLF Sbjct: 181 LSKEIIYVLTPMAIPGIASTLLLNIILAWNEAFWTLNLSAAKAAPLTAFIASYSSPEGLF 240 Query: 241 WAKLSAASTLAIAPILVLGWFSQRQLVRGLTFGAVR 276 +AKLSAAST+AIAPIL+LGWFSQ+QLVRGLTFGAV+ Sbjct: 241 YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK 276 >ref|YP_002826982.1| putative mannitol transmembrane permease component of ABC transporter [Sinorhizobium fredii NGR234] gb|ACP26229.1| putative mannitol transmembrane permease component of ABC transporter [Sinorhizobium fredii NGR234] Length = 276 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 208/276 (75%), Positives = 248/276 (89%) Query: 1 MARMVTTRRKVISTVAAWLVGFLIFFPILWMVLASFKTELEAFAIPPSFLFFHWTTENYA 60 MAR V+T+RK+++TV AW +G LIFFPILW L SFKTE +A A PP+FLFF WTTENY Sbjct: 1 MARNVSTQRKLVTTVVAWTIGILIFFPILWTFLTSFKTEAQAIASPPAFLFFDWTTENYF 60 Query: 61 TVQERSDYFHHALNSIIIAGGSTLIAMLIAIPAAWSMAFSPTKRTKDVLLWMLSTKMMPP 120 VQ RSDYF H +NS++++ GSTL+ ++IAIP+AW+MAFSPTKRTKDVL+WMLSTKMMPP Sbjct: 61 EVQSRSDYFKHFMNSVVVSFGSTLLGLVIAIPSAWAMAFSPTKRTKDVLMWMLSTKMMPP 120 Query: 121 VGVLVPIYLIYRTFGLLDTRSGLIFILCLGNLPIVIWMLFTYFKEIPKDILEAARMDGAT 180 VGVLVP+YLI+R GLLDTR+GL+ +L L NLPI+IWML+TYFKEIP +ILEAARMDGA+ Sbjct: 121 VGVLVPMYLIFRNTGLLDTRAGLVMVLTLINLPIIIWMLYTYFKEIPGEILEAARMDGAS 180 Query: 181 IGRELIYVLTPMAVPGLASTLLLNLILAWNEAFWTLNLSTLEAAPLTVFIASYSSPEGLF 240 + +E+IYVLTPMA+PG+ASTLLLN+ILAWNEAFWTLNLS +AAPLT FIASYSSPEGLF Sbjct: 181 LAKEIIYVLTPMAIPGIASTLLLNIILAWNEAFWTLNLSAAKAAPLTAFIASYSSPEGLF 240 Query: 241 WAKLSAASTLAIAPILVLGWFSQRQLVRGLTFGAVR 276 +AKLSAAST+AIAPIL+LGWFSQ+QLVRGLTFGAV+ Sbjct: 241 YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK 276 >ref|YP_002977532.1| ABC transporter inner membrane protein [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS57993.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 276 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 209/276 (75%), Positives = 246/276 (89%) Query: 1 MARMVTTRRKVISTVAAWLVGFLIFFPILWMVLASFKTELEAFAIPPSFLFFHWTTENYA 60 MAR VTT+RK+I T AW +G LIFFPILW L SFK+E +A A PP FLFFHWTTENYA Sbjct: 1 MARKVTTKRKLIVTAIAWTLGILIFFPILWTFLTSFKSEADAIASPPQFLFFHWTTENYA 60 Query: 61 TVQERSDYFHHALNSIIIAGGSTLIAMLIAIPAAWSMAFSPTKRTKDVLLWMLSTKMMPP 120 VQ RS+Y H +NS+II+ GSTLI ++IAIPAAW+MAFSPTKRTKDVL+WMLSTKMMPP Sbjct: 61 EVQSRSNYLSHFMNSVIISFGSTLIGLIIAIPAAWAMAFSPTKRTKDVLMWMLSTKMMPP 120 Query: 121 VGVLVPIYLIYRTFGLLDTRSGLIFILCLGNLPIVIWMLFTYFKEIPKDILEAARMDGAT 180 VG L+PIYL++R FGLLDTR+GL+ +L L NLPI++WML+TYFKEIP +ILEAARMDGA+ Sbjct: 121 VGALIPIYLMFRNFGLLDTRTGLVIVLTLINLPIIVWMLYTYFKEIPGEILEAARMDGAS 180 Query: 181 IGRELIYVLTPMAVPGLASTLLLNLILAWNEAFWTLNLSTLEAAPLTVFIASYSSPEGLF 240 + +E++YVLTPMAVPG+ASTLLLN+ILAWNEAFWTLNL+ +AAPLT FIASYSSPEGLF Sbjct: 181 LMKEIVYVLTPMAVPGIASTLLLNIILAWNEAFWTLNLTASKAAPLTAFIASYSSPEGLF 240 Query: 241 WAKLSAASTLAIAPILVLGWFSQRQLVRGLTFGAVR 276 +AKLSAAST+AIAPIL+LGWFSQ+QLVRGLTFGAV+ Sbjct: 241 YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK 276