BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0217.0026.p (437 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001237078.1| putative ABC transporter periplasmic binding... 796 0.0 ref|YP_001208439.1| putative ABC transporter periplasmic binding... 791 0.0 ref|YP_003692777.1| ABC transporter periplasmic protein [Starkey... 753 0.0 ref|YP_769793.1| mannitol-binding component of ABC transporter [... 681 0.0 ref|YP_002826984.1| putative mannitol-binding component of ABC t... 681 0.0 >ref|YP_001237078.1| putative ABC transporter periplasmic binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ33172.1| sorbitol-binding protein / mannitol-binding protein [Bradyrhizobium sp. BTAi1] Length = 443 Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/433 (88%), Positives = 409/433 (94%) Query: 5 LCAVAGAAAVLISAPSIAQTTLTVATVNNGDMIRMQGLTSEFTAKNPDITVKWVTLEENV 64 L A+ GAA +L +AP+ A+TTLT+ATVNNGDMIRMQGLT EFT NPDI VKWVTLEENV Sbjct: 11 LAALMGAATLLTTAPAWAETTLTIATVNNGDMIRMQGLTGEFTKANPDIQVKWVTLEENV 70 Query: 65 LRQRVTTDIATKGGQFDVLTIGTYEVPIWAKKNWLVPLDKLGADYDVGDLLPKIKDAVSV 124 LRQRVTTDIATKGGQFD+LTIGTYEVPIWAKKNWLVPLDKLGADYD D+LPKIKDAVSV Sbjct: 71 LRQRVTTDIATKGGQFDILTIGTYEVPIWAKKNWLVPLDKLGADYDANDILPKIKDAVSV 130 Query: 125 DGKLYAAPFYGESSMVMYRTDLFDKAGLKMPESPTWDFVVDAAKKLTDKSAGVYGICLRG 184 DGKLYAAPFYGESSMVMYRTDLFDKAGLKMPESPTWDFV+DAAKKLTDK GV+GICLRG Sbjct: 131 DGKLYAAPFYGESSMVMYRTDLFDKAGLKMPESPTWDFVIDAAKKLTDKPGGVFGICLRG 190 Query: 185 KAGWGENMAFLTAMANSYGARWFDEKWEPQFTSPEWKKTLTTYVDLMKQAGPPGASSNGF 244 KAGWGENMAFLTAM+NS+GARWFDEKW+PQF +PEWKKTLTTYVDLMK AGPPGASSNGF Sbjct: 191 KAGWGENMAFLTAMSNSFGARWFDEKWQPQFNTPEWKKTLTTYVDLMKDAGPPGASSNGF 250 Query: 245 NENLALFNAGKCAMWIDATVAASFVSNPKESTVADKVGFALAPNTGLGKNANWLWAWSLA 304 NENLALFN+GKCAMWIDATVAASFV+NPKES VADKVGFALAPNTGLGKNANWLWAW+LA Sbjct: 251 NENLALFNSGKCAMWIDATVAASFVTNPKESKVADKVGFALAPNTGLGKNANWLWAWNLA 310 Query: 305 VPAGSKKVDAAEKFIAWATGKDYTKLVASKEGWANVPPGTRSSLYKNPDYLKVAPFAKLT 364 +PAGSKK DAAEKFIAWAT KDYTKLVASK+GWANVPPGTR+SLYKN DYLKVAPFAK+T Sbjct: 311 IPAGSKKTDAAEKFIAWATSKDYTKLVASKDGWANVPPGTRTSLYKNEDYLKVAPFAKIT 370 Query: 365 LASIDAADPNKPTVKPVPYVGVQYAAIPEFQGIGTQVRQQFSAALSGSTSVDAALTAAQS 424 LASIDAADP+ PTVKPVPYVGVQYAAIPEFQGIGT V QQFSAAL+GS +VDAAL AAQS Sbjct: 371 LASIDAADPSHPTVKPVPYVGVQYAAIPEFQGIGTAVGQQFSAALAGSMTVDAALAAAQS 430 Query: 425 ATEREMKRAGYIK 437 +TEREMKRAGYIK Sbjct: 431 STEREMKRAGYIK 443 >ref|YP_001208439.1| putative ABC transporter periplasmic binding protein [Bradyrhizobium sp. ORS 278] emb|CAL80224.1| putative ABC transporter, periplasmic binding protein [Bradyrhizobium sp. ORS 278] Length = 443 Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/421 (90%), Positives = 403/421 (95%) Query: 17 SAPSIAQTTLTVATVNNGDMIRMQGLTSEFTAKNPDITVKWVTLEENVLRQRVTTDIATK 76 + P++A+TTLT+ATVNNGDMIRMQGLT EFT NPDI VKWVTLEENVLRQRVTTDIATK Sbjct: 23 TMPALAETTLTIATVNNGDMIRMQGLTGEFTKANPDIQVKWVTLEENVLRQRVTTDIATK 82 Query: 77 GGQFDVLTIGTYEVPIWAKKNWLVPLDKLGADYDVGDLLPKIKDAVSVDGKLYAAPFYGE 136 GGQFD+LTIGTYEVPIWAKKNWLVPLDKLGADYD D+LPKIKDAVSVDGKLYAAPFYGE Sbjct: 83 GGQFDILTIGTYEVPIWAKKNWLVPLDKLGADYDANDILPKIKDAVSVDGKLYAAPFYGE 142 Query: 137 SSMVMYRTDLFDKAGLKMPESPTWDFVVDAAKKLTDKSAGVYGICLRGKAGWGENMAFLT 196 SSMVMYRTDLFDKAGLKMPESPTWDFV+DAAKKLTDK AG +GICLRGKAGWGENMAFLT Sbjct: 143 SSMVMYRTDLFDKAGLKMPESPTWDFVIDAAKKLTDKQAGTFGICLRGKAGWGENMAFLT 202 Query: 197 AMANSYGARWFDEKWEPQFTSPEWKKTLTTYVDLMKQAGPPGASSNGFNENLALFNAGKC 256 AM+NS+GARWFDEKW+PQF +PEWKKTL+TYVDLMK+AGPPGASSNGFNENLALFNAGKC Sbjct: 203 AMSNSFGARWFDEKWQPQFNTPEWKKTLSTYVDLMKEAGPPGASSNGFNENLALFNAGKC 262 Query: 257 AMWIDATVAASFVSNPKESTVADKVGFALAPNTGLGKNANWLWAWSLAVPAGSKKVDAAE 316 AMWIDATVAASFV+NPKES VADKVGFALAPNTGLGKNANWLWAW+LA+PAGSKK DAAE Sbjct: 263 AMWIDATVAASFVTNPKESKVADKVGFALAPNTGLGKNANWLWAWNLAIPAGSKKTDAAE 322 Query: 317 KFIAWATGKDYTKLVASKEGWANVPPGTRSSLYKNPDYLKVAPFAKLTLASIDAADPNKP 376 KFIAWAT KDYTKLVASKEGWANVPPGTR+SLYKN DYLKVAPFAK+TLASIDAADP+ P Sbjct: 323 KFIAWATSKDYTKLVASKEGWANVPPGTRTSLYKNEDYLKVAPFAKITLASIDAADPSHP 382 Query: 377 TVKPVPYVGVQYAAIPEFQGIGTQVRQQFSAALSGSTSVDAALTAAQSATEREMKRAGYI 436 TVKPVPYVGVQYAAIPEFQGIGT V QQFSAAL+GS +VDAAL+AAQSATEREMKRAGYI Sbjct: 383 TVKPVPYVGVQYAAIPEFQGIGTAVGQQFSAALAGSMTVDAALSAAQSATEREMKRAGYI 442 Query: 437 K 437 K Sbjct: 443 K 443 >ref|YP_003692777.1| ABC transporter periplasmic protein [Starkeya novella DSM 506] gb|ADH88158.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 437 Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/415 (86%), Positives = 390/415 (93%) Query: 23 QTTLTVATVNNGDMIRMQGLTSEFTAKNPDITVKWVTLEENVLRQRVTTDIATKGGQFDV 82 QTTLT+ATVNNGDMIRMQGLTS+FTAKNP I VKWVTLEENVLRQRVTTDIATKGGQFDV Sbjct: 23 QTTLTIATVNNGDMIRMQGLTSDFTAKNPGINVKWVTLEENVLRQRVTTDIATKGGQFDV 82 Query: 83 LTIGTYEVPIWAKKNWLVPLDKLGADYDVGDLLPKIKDAVSVDGKLYAAPFYGESSMVMY 142 LTIGTYEVPIWAK+ WL+PLD LGA YD D+LPKI DAVSV G LYAAPFYGESSM+MY Sbjct: 83 LTIGTYEVPIWAKQKWLLPLDDLGAAYDAKDILPKIADAVSVGGTLYAAPFYGESSMMMY 142 Query: 143 RTDLFDKAGLKMPESPTWDFVVDAAKKLTDKSAGVYGICLRGKAGWGENMAFLTAMANSY 202 RTDLF+KAGLKMPESP+WDFV DAA+KLTDKSAGVYGICLRGKAGWGENMAFLTAMANSY Sbjct: 143 RTDLFEKAGLKMPESPSWDFVFDAARKLTDKSAGVYGICLRGKAGWGENMAFLTAMANSY 202 Query: 203 GARWFDEKWEPQFTSPEWKKTLTTYVDLMKQAGPPGASSNGFNENLALFNAGKCAMWIDA 262 GARWFDEKW+PQF +PEWK TLT YV +MK+AGPPG+SSNGFNENLALFN+GKCAMWIDA Sbjct: 203 GARWFDEKWQPQFNTPEWKATLTDYVAIMKEAGPPGSSSNGFNENLALFNSGKCAMWIDA 262 Query: 263 TVAASFVSNPKESTVADKVGFALAPNTGLGKNANWLWAWSLAVPAGSKKVDAAEKFIAWA 322 TVAASFVSNPKES VADKVGFALAPN GLGKNANWLWAW+LA+PAGSKKVDAA+KFIAWA Sbjct: 263 TVAASFVSNPKESKVADKVGFALAPNKGLGKNANWLWAWNLAIPAGSKKVDAAKKFIAWA 322 Query: 323 TGKDYTKLVASKEGWANVPPGTRSSLYKNPDYLKVAPFAKLTLASIDAADPNKPTVKPVP 382 T K YT+LVASKEGWANVPPGTR+SLY+N YL APFA+LTLASID+ADPN PTVKPVP Sbjct: 323 TSKGYTELVASKEGWANVPPGTRTSLYQNEAYLSAAPFARLTLASIDSADPNHPTVKPVP 382 Query: 383 YVGVQYAAIPEFQGIGTQVRQQFSAALSGSTSVDAALTAAQSATEREMKRAGYIK 437 YVGVQYAAIPEFQGIGTQV QQFSAALSG+T+VDAALTAAQ++TEREM+RAGY+K Sbjct: 383 YVGVQYAAIPEFQGIGTQVGQQFSAALSGATTVDAALTAAQASTEREMRRAGYLK 437 >ref|YP_769793.1| mannitol-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] emb|CAK09707.1| putative mannitol-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 436 Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/428 (75%), Positives = 365/428 (85%) Query: 10 GAAAVLISAPSIAQTTLTVATVNNGDMIRMQGLTSEFTAKNPDITVKWVTLEENVLRQRV 69 GA + L A + TLT+ATVNNGDMIRMQ LT +F AKNP I ++WVTLEENVLRQ+V Sbjct: 9 GACSALAFAGMASAETLTIATVNNGDMIRMQKLTDDFKAKNPGIDLEWVTLEENVLRQKV 68 Query: 70 TTDIATKGGQFDVLTIGTYEVPIWAKKNWLVPLDKLGADYDVGDLLPKIKDAVSVDGKLY 129 TTDIATKGGQ+DVLTIGTYEVPIWAK+ WLVPLD LGA+YDV DLLP I+ +++DGKLY Sbjct: 69 TTDIATKGGQYDVLTIGTYEVPIWAKQGWLVPLDNLGANYDVDDLLPAIRSGLTMDGKLY 128 Query: 130 AAPFYGESSMVMYRTDLFDKAGLKMPESPTWDFVVDAAKKLTDKSAGVYGICLRGKAGWG 189 AAPFYGESSMVMYR DLFD AGLKMP++PTWDF+ DAA+K+T+K VYGICLRGKAGWG Sbjct: 129 AAPFYGESSMVMYRKDLFDAAGLKMPDAPTWDFIADAARKITNKDKEVYGICLRGKAGWG 188 Query: 190 ENMAFLTAMANSYGARWFDEKWEPQFTSPEWKKTLTTYVDLMKQAGPPGASSNGFNENLA 249 ENMAFLTAM+NS+GARWFDE W+PQF PEWK TL YV LMK AGPPGASSNGFNENLA Sbjct: 189 ENMAFLTAMSNSFGARWFDENWKPQFDQPEWKDTLDFYVKLMKDAGPPGASSNGFNENLA 248 Query: 250 LFNAGKCAMWIDATVAASFVSNPKESTVADKVGFALAPNTGLGKNANWLWAWSLAVPAGS 309 LF GKC MWIDATVAASFVSNPKESTVADKVGFALAP+ GLGK NWLWAWSLA+PAGS Sbjct: 249 LFQTGKCGMWIDATVAASFVSNPKESTVADKVGFALAPDKGLGKRGNWLWAWSLAIPAGS 308 Query: 310 KKVDAAEKFIAWATGKDYTKLVASKEGWANVPPGTRSSLYKNPDYLKVAPFAKLTLASID 369 +K +AAEKF+AWAT KDYT LVA K+GW N PPGTR+SLY N +Y K APFAK+T+ SI+ Sbjct: 309 QKAEAAEKFVAWATSKDYTNLVAEKDGWLNAPPGTRASLYANAEYQKAAPFAKMTIDSIN 368 Query: 370 AADPNKPTVKPVPYVGVQYAAIPEFQGIGTQVRQQFSAALSGSTSVDAALTAAQSATERE 429 +ADP+KPTVKPVPYVGVQ+ AIPEFQGIGT + QQFSAAL+G SVD AL +AQ RE Sbjct: 369 SADPSKPTVKPVPYVGVQFVAIPEFQGIGTAIGQQFSAALAGQLSVDQALQSAQQLATRE 428 Query: 430 MKRAGYIK 437 M +AGYIK Sbjct: 429 MTKAGYIK 436 >ref|YP_002826984.1| putative mannitol-binding component of ABC transporter [Sinorhizobium fredii NGR234] gb|ACP26231.1| putative mannitol-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 436 Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/435 (73%), Positives = 367/435 (84%) Query: 3 NVLCAVAGAAAVLISAPSIAQTTLTVATVNNGDMIRMQGLTSEFTAKNPDITVKWVTLEE 62 N+ + G + + A TLT+ATVNNGDMIRMQ LT FT+KNPDI ++WVTLEE Sbjct: 2 NLRTFLLGTCSAVALAGLAQAETLTIATVNNGDMIRMQKLTEAFTSKNPDIQLEWVTLEE 61 Query: 63 NVLRQRVTTDIATKGGQFDVLTIGTYEVPIWAKKNWLVPLDKLGADYDVGDLLPKIKDAV 122 NVLRQRVTTDIATKGGQ+D++TIGTYEVPIWAK+ WL+PLDKLG DYDV DLLP I+ + Sbjct: 62 NVLRQRVTTDIATKGGQYDIMTIGTYEVPIWAKQGWLLPLDKLGPDYDVDDLLPAIRSGL 121 Query: 123 SVDGKLYAAPFYGESSMVMYRTDLFDKAGLKMPESPTWDFVVDAAKKLTDKSAGVYGICL 182 ++D KLYAAPFYGESSMVMYR DLF+KAGL MPE+PTW+F+ DAA+K+TDK++ +YGICL Sbjct: 122 TIDDKLYAAPFYGESSMVMYRKDLFEKAGLTMPEAPTWEFIADAARKITDKNSEIYGICL 181 Query: 183 RGKAGWGENMAFLTAMANSYGARWFDEKWEPQFTSPEWKKTLTTYVDLMKQAGPPGASSN 242 RGKAGWGENMAFLTA AN++GARWFDE W+PQF PEWK L YV LM AGPPGASSN Sbjct: 182 RGKAGWGENMAFLTATANAFGARWFDENWKPQFDQPEWKNALDFYVKLMNDAGPPGASSN 241 Query: 243 GFNENLALFNAGKCAMWIDATVAASFVSNPKESTVADKVGFALAPNTGLGKNANWLWAWS 302 GFNENL+LF GKC MWIDATVAASFV+NP ESTVADKVGFALAP+TGLGK NWLWAW+ Sbjct: 242 GFNENLSLFQTGKCGMWIDATVAASFVTNPHESTVADKVGFALAPDTGLGKRGNWLWAWN 301 Query: 303 LAVPAGSKKVDAAEKFIAWATGKDYTKLVASKEGWANVPPGTRSSLYKNPDYLKVAPFAK 362 LA+PAGS+K DAA+KFIAWATGKDY KLVA KEGWANVPPGTR+SLY+NP+Y K APFAK Sbjct: 302 LAIPAGSQKADAAQKFIAWATGKDYLKLVAEKEGWANVPPGTRTSLYENPEYQKAAPFAK 361 Query: 363 LTLASIDAADPNKPTVKPVPYVGVQYAAIPEFQGIGTQVRQQFSAALSGSTSVDAALTAA 422 +TL SI+AADP P VKPVPYVGVQ+ AIPEFQG+GT V Q FSAAL+G SVD AL +A Sbjct: 362 MTLDSINAADPKNPAVKPVPYVGVQFVAIPEFQGLGTAVGQVFSAALAGQMSVDQALASA 421 Query: 423 QSATEREMKRAGYIK 437 Q T REM +AGYIK Sbjct: 422 QQLTTREMTKAGYIK 436