BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0217.0024.p (791 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772504.1| hypothetical protein bll5864 [Bradyrhizobium ja... 1068 0.0 ref|YP_781858.1| PAS/PAC sensor-containing diguanylate cyclase/p... 748 0.0 ref|NP_767236.1| hypothetical protein bll0596 [Bradyrhizobium ja... 738 0.0 ref|ZP_07028093.1| diguanylate cyclase/phosphodiesterase with MH... 611 e-172 ref|YP_004632296.1| GGDEF/EAL domain-containing protein [Oligotr... 595 e-167 >ref|NP_772504.1| hypothetical protein bll5864 [Bradyrhizobium japonicum USDA 110] dbj|BAC51129.1| bll5864 [Bradyrhizobium japonicum USDA 110] Length = 799 Score = 1068 bits (2761), Expect = 0.0, Method: Compositional matrix adjust. Identities = 553/790 (70%), Positives = 634/790 (80%), Gaps = 1/790 (0%) Query: 2 EHDWRLVVLGAVICLLASAVAISLFHRARAAQGRAREIWIGLDAAVGGCGIWATHFVAML 61 +HDWRLV LG +CLLASA AISLF RARAA G AR WI LDA V GCGIWATHF+AM Sbjct: 11 QHDWRLVALGGAVCLLASAAAISLFQRARAASGGARVSWIALDAVVAGCGIWATHFIAMQ 70 Query: 62 AYDPGIEAGYNIPITLLSLVLAVAILAVGLAVATLDERWRTVAAGGAIVGAGVAAMHYTG 121 AY PG YNIP+T+LSL+ A+A+ VGL+++ R VA GGA+VG GVAAMHYTG Sbjct: 71 AYGPGAGGAYNIPVTVLSLIFAIAVTFVGLSISVSATRTIPVALGGAVVGGGVAAMHYTG 130 Query: 122 MLGLELPARIVWSPGIVASSIAFGSLFGALALVVATRGERFGTVAAATGLLTVAIVSHHF 181 M+ LE+PARI W+ VA SI G +FG+LALVVA R + AT LLTVAIVSHHF Sbjct: 131 MMALEIPARIGWATDTVAVSIVLGIVFGSLALVVAGRRDGVANALGATVLLTVAIVSHHF 190 Query: 182 TAMGAVTLVPDPTIVSGGLTVSPRVLSFMTAVAVFAILGLSLIASILDRRAKTELHKQKV 241 TAMGAV L PDP+IV GL++ P LS +TA A AI+ ++L A++LDRRAK EL +Q+V Sbjct: 191 TAMGAVELTPDPSIVISGLSIPPASLSVLTASAAVAIIAIALAAAVLDRRAKGELGRQQV 250 Query: 242 VLDTALENMSQGLCMFDADGRIMLFNERYSEMMGRSRMPLQGRLLIDVLQDLHSIGEWDG 301 VLDTALENMSQGLCMFDADG+IMLFNERY+ M+ R+ + L GRLL+DVL++ + G+W G Sbjct: 251 VLDTALENMSQGLCMFDADGKIMLFNERYAAMLRRTDIALTGRLLVDVLREEQAKGQWQG 310 Query: 302 DPEEFCNALVAEAKAGHSATRIVSRNERAIRVVDQPMKGGGWVATFEDITEWQQAQEQIS 361 D +EF LV +A+ G + +++V+R R+IRVV+QPM+GGGWVATFEDITEW +AQ +IS Sbjct: 311 DADEFFARLVIDAREGRTTSQVVNRLGRSIRVVNQPMQGGGWVATFEDITEWLEAQAKIS 370 Query: 362 HMARHDALTNLPNRTLFREQLEKASRLAKRSDQLAVLCLDLDHFKEINDTLGHPIGDALL 421 HMARHDALT LPNR LF EQLE+ R DQLAVLCLDLDHFK+IND+LGHPIGDALL Sbjct: 371 HMARHDALTGLPNRVLFHEQLEQGLRRTGSGDQLAVLCLDLDHFKDINDSLGHPIGDALL 430 Query: 422 REVARRLGECVTEHDTVARLGGDEFAIVQFCSNCEPSVVSSLASLVVERIAAPYEIGGHQ 481 +EV RRL V E DTVARLGGDEFA+VQ E + LA +VE I+APYEI HQ Sbjct: 431 KEVGRRLKATVGESDTVARLGGDEFAVVQI-GRSEEAAARCLAGRLVEVISAPYEIDDHQ 489 Query: 482 LVIGVSIGISLAPEDGKDPDELLQKADLALYRAKADGRGTYRFFETGMDARAQARRLLER 541 +VIGVSIGISL+P+DG + DELL+ ADLALYRAKADGRGTYRFFETGMDARAQARRLLE Sbjct: 490 IVIGVSIGISLSPQDGSNADELLKNADLALYRAKADGRGTYRFFETGMDARAQARRLLEM 549 Query: 542 DLRLALEHDEFEVYYQPIRDVAGGQVVAFEALARWNHSLRGLIAPNNFIPVAEETGLIVP 601 DLR AL+ DEF+ YYQPIRDVA G+VV FEAL RWNH RGLIAP NFIP+AEETGLIV Sbjct: 550 DLRAALQRDEFQPYYQPIRDVASGRVVVFEALLRWNHPQRGLIAPINFIPLAEETGLIVQ 609 Query: 602 LGEIVLRKACADAAGWPEAVAVAVNLSPVQFKNPNLVSSVKAALQASGLSPDRLELEITE 661 LGE VLR AC DAA WP+ V VAVNLSPVQF+NPNL++SV AAL SGL RLELEITE Sbjct: 610 LGEFVLRSACTDAATWPDDVDVAVNLSPVQFRNPNLIASVTAALTVSGLPARRLELEITE 669 Query: 662 SVLLQNSEATLAVLHELRGFGVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFVTDLATR 721 SVLLQNSEATL LHELR GVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFV++LATR Sbjct: 670 SVLLQNSEATLTTLHELRAMGVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFVSELATR 729 Query: 722 EDSMAIVRAVTGLGKSLGIVTTAEGVETDTQFDLLRQEGCTQAQGYLFSPPRPAADVAKM 781 EDSMAI+RAVTGLG+SLGIVTTAEGVE D Q +LLR+EGCTQAQGYLFS PRPA+DVA M Sbjct: 730 EDSMAIIRAVTGLGRSLGIVTTAEGVENDAQLELLRREGCTQAQGYLFSKPRPASDVALM 789 Query: 782 LRRAPERSVA 791 L R R+ A Sbjct: 790 LERPRLRASA 799 >ref|YP_781858.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase [Rhodopseudomonas palustris BisA53] gb|ABJ06878.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) [Rhodopseudomonas palustris BisA53] Length = 802 Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/796 (50%), Positives = 531/796 (66%), Gaps = 10/796 (1%) Query: 2 EHDWRLVVLGAVICLLASAVAISLFHRARAAQGRAREIWIGLDAAVGGCGIWATHFVAML 61 EHD RLV + A ICLL S V +S+F R RA QGR+R +W+ L A G G WATHF+AML Sbjct: 11 EHDLRLVAVAAAICLLVSMVGVSMFDRCRATQGRSRLMWLALVAISSGFGTWATHFIAML 70 Query: 62 AYDPGIEAGYNIPITLLSLVLAVAILAVGLAVATL-DERWRTVAAGGAIVGAGVAAMHYT 120 AY P A Y++ +TLLSL LA+ I+ G AVA + RW GGA++G G+AAMHY Sbjct: 71 AYHPSTHASYHLGLTLLSLALAILIIGAGAAVALIGPSRW-YAGIGGAVIGLGIAAMHYC 129 Query: 121 GMLGLELPARIVWSPGIVASSIAFGSLFGALALVVATRGERFGTVAAATGLLTVAIVSHH 180 G+L ++ P ++WS V +SI F ++ R + G + A+ L +++S H Sbjct: 130 GILAMQAPLLLIWSQETVLASIVLAVAFSIPGAIIGARRDELGYMLLASLLFAASVLSLH 189 Query: 181 FTAMGAVTLVPDPTIVSGGLTVSPRVLSFMTAVAVFAILGLSLIASILDRRAKTELHKQK 240 FTAM A+T +PDP + G ++ L+ + A A AILG LIA++ DRR + +QK Sbjct: 190 FTAMSAITALPDPDQTAVGPALTAPSLALVIAGAAAAILGGCLIAALTDRRFRAVNARQK 249 Query: 241 VVLDTALENMSQGLCMFDADGRIMLFNERYSEMMGRSRMPLQGRLLIDVLQDLHSIGEWD 300 ++LD A+ENM Q LCMFDA+G LFN Y+++MG L G L+D + S G+ Sbjct: 250 LLLDIAIENMPQALCMFDAEGNSTLFNSHYADLMGIPADRLNGMNLLDQFELRKSHGKLA 309 Query: 301 GDPEEFCNALVAEAKAGHSATRIVSRNE-----RAIRVVDQPMKGGGWVATFEDITEWQQ 355 GDP +++A+ AG IV + R +R+ +QP+ G GWV T ED+TEW++ Sbjct: 310 GDPRAIYESIMAQISAGRP---IVKTDNLIVPGRVLRITEQPLPGTGWVTTIEDVTEWRK 366 Query: 356 AQEQISHMARHDALTNLPNRTLFREQLEKASRLAKRSDQLAVLCLDLDHFKEINDTLGHP 415 QE+I+H+ARHDALT+LPNRT FRE++++ R +R AVL +DLDHFKEIND+LGHP Sbjct: 367 TQERIAHLARHDALTDLPNRTTFREEIDRVLRYTRREVGAAVLYIDLDHFKEINDSLGHP 426 Query: 416 IGDALLREVARRLGECVTEHDTVARLGGDEFAIVQFCSNCEPSVVSSLASLVVERIAAPY 475 IGD LL EVARRL +C+ + D VARLGGDEFA++Q + S ++LA +V I+ PY Sbjct: 427 IGDELLIEVARRLADCIRDGDLVARLGGDEFAVIQISHHEPESDAAALAMRIVSIISTPY 486 Query: 476 EIGGHQLVIGVSIGISLAPEDGKDPDELLQKADLALYRAKADGRGTYRFFETGMDARAQA 535 E+ GH + IG S+GI+LAP D +PDEL++KADLALYRAKA+GRG+YRFFE MDA AQ Sbjct: 487 ELQGHHVSIGASVGIALAPTDASEPDELIKKADLALYRAKAEGRGSYRFFELDMDASAQT 546 Query: 536 RRLLERDLRLALEHDEFEVYYQPIRDVAGGQVVAFEALARWNHSLRGLIAPNNFIPVAEE 595 RRLL +LRLAL +EF + YQPIRDV Q++ FEAL RW H RG I P F+ +AE Sbjct: 547 RRLLTTELRLALARNEFALLYQPIRDVESDQIICFEALLRWEHPERGEILPEQFLALAES 606 Query: 596 TGLIVPLGEIVLRKACADAAGWPEAVAVAVNLSPVQFKNPNLVSSVKAALQASGLSPDRL 655 +GLIVP+G+ VL+ ACADAA W V V+VNLSP QF++P LV SV AAL ASGL+P RL Sbjct: 607 SGLIVPIGDWVLQTACADAAQWHSDVGVSVNLSPSQFRHPRLVPSVAAALTASGLAPHRL 666 Query: 656 ELEITESVLLQNSEATLAVLHELRGFGVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFV 715 ELE+TE+ LLQ + +A L LR GV +S+D FG GY+SLS L SFPFD+IKID SF+ Sbjct: 667 ELEVTETALLQQRKPAMAALKALRALGVGVSMDHFGAGYASLSSLSSFPFDRIKIDGSFI 726 Query: 716 TDLATREDSMAIVRAVTGLGKSLGIVTTAEGVETDTQFDLLRQEGCTQAQGYLFSPPRPA 775 ++ D+ A + AVTGLGK LG T A GVET Q +LR GC + QG L SPPR A Sbjct: 727 QEIEQSGDAFAALTAVTGLGKRLGRTTAATGVETVHQLAMLRATGCAEIQGLLISPPRSA 786 Query: 776 ADVAKMLRRAPERSVA 791 +V ++L R RSVA Sbjct: 787 HEVKQILGRDNHRSVA 802 >ref|NP_767236.1| hypothetical protein bll0596 [Bradyrhizobium japonicum USDA 110] dbj|BAC45861.1| bll0596 [Bradyrhizobium japonicum USDA 110] Length = 833 Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/820 (49%), Positives = 549/820 (66%), Gaps = 47/820 (5%) Query: 2 EHDWRLVVLGAVICLLASAVAISLFHRARAAQGRAREIWIGLDAAVGGCGIWATHFVAML 61 EHDWRLV+L ++C +AS VA+S+FHRA A++ AR IW+ + A G GIWATHFVAML Sbjct: 11 EHDWRLVLLAGLVCFVASIVAVSIFHRAVASRAWARLIWVAIAGAAIGYGIWATHFVAML 70 Query: 62 AYDPGIEAGYNIPITLLSLVLAVAILAVGLAVATLDE-RWRTVAAGGAIVGAGVAAMHYT 120 AY+PG+ Y + +T+LSL A+ + + G VA + +WR A GG I +A+MHY Sbjct: 71 AYEPGVPTNYGLVLTVLSLAAAMILTSGGFGVAVNNSGQWRAAAGGGIIGAG-IASMHYI 129 Query: 121 GMLGLELPARIVWSPGIVASSIAFGSLFGALALVVAT-RGERFGTVAAATGLLTVAIVSH 179 GM LE+P R+ WSPG+V SI G + G AL VA +++GT AAA LLT+AIVSH Sbjct: 130 GMWALEVPGRVTWSPGLVLISIGLGMVLGYAALAVALGHKDKWGTFAAAL-LLTLAIVSH 188 Query: 180 HFTAMGAVTLVPDPTIVSGGLTVSPRVLSFMTAVAVFAILGLSLIASILDRRAKT----- 234 HFTAMGAV +VPDPT+ S L++SP L+ A ++LG+S + + DRR T Sbjct: 189 HFTAMGAVQIVPDPTLASDTLSLSPTFLAVAIAGVALSVLGMSFVGVLADRRLATRTSRF 248 Query: 235 -------------------ELHKQKVVLDTALENMSQGLCMFDADGRIMLFNERYSEM-- 273 E+ +QK+ LDTA+ NM + LCMFDA+ R+++ NERY+ + Sbjct: 249 EQIISELSLARQQVEDSQQEIQEQKLRLDTAINNMVEALCMFDAEKRLVVCNERYARLYQ 308 Query: 274 ----MGRSRMP----LQGRLLIDVLQDLHSIGEWDGDPEEFCNALVAEAKAGHSATRIVS 325 + R+ P ++ R++ +L+ S +G E+F + L A S+ Sbjct: 309 LPPELLRTGTPHADIIRHRVVTGILKSDTS----EGAAEQFLSKLAALPFDAVSSRIDEF 364 Query: 326 RNERAIRVVDQPMKGGGWVATFEDITEWQQAQEQISHMARHDALTNLPNRTLFREQLEKA 385 + R I V QPM GGGWVAT D+TE ++++ +I+HMA+HDALT+LPNR L RE++E A Sbjct: 365 TDGRLICVTRQPMAGGGWVATHLDVTEQRRSEAKIAHMAQHDALTDLPNRVLLRERMEHA 424 Query: 386 SRLAKRSD-QLAVLCLDLDHFKEINDTLGHPIGDALLREVARRLGECVTEHDTVARLGGD 444 + + LAVL LDLD FKE+NDTLGHP GD+LLR VA RL EC TE +ARLGGD Sbjct: 425 IAVTRNGGLDLAVLMLDLDRFKEVNDTLGHPTGDSLLRAVATRLRECTTETALIARLGGD 484 Query: 445 EFAIVQFCSNCEPSV-VSSLASLVVERIAAPYEIGGHQLVIGVSIGISLAPEDGKDPDEL 503 EFA++ + +N P+V ++LA + + + P+++G H++ +G SIGI++AP DG D D + Sbjct: 485 EFAVIDYVTN--PAVEAAALAENIRKALCEPFDLGDHRVTVGTSIGIAIAPRDGNDSDVI 542 Query: 504 LQKADLALYRAKADGRGTYRFFETGMDARAQARRLLERDLRLALEHDEFEVYYQPIRDVA 563 ++ ADLALY AK+ GRG +RFFE +D ARR LERD+R A+ +FE++YQP A Sbjct: 543 MKSADLALYSAKSGGRGAFRFFEPELDELMHARRNLERDMRDAIVGRQFELHYQPFVSPA 602 Query: 564 GGQVVAFEALARWNHSLRGLIAPNNFIPVAEETGLIVPLGEIVLRKACADAAGWPEAVAV 623 G+V FEAL RW+H +GL+ P+ FIP+AEETGLIVPLGE VLR ACA+AA WP V + Sbjct: 603 TGKVNGFEALLRWHHPQQGLVMPSEFIPLAEETGLIVPLGEWVLRAACAEAAKWPPHVRI 662 Query: 624 AVNLSPVQFKNPNLVSSVKAALQASGLSPDRLELEITESVLLQNSEATLAVLHELRGFGV 683 AVNLSP QF++ LV V AL +SG++P RLELE+TE+V++ +SEA AVL +LR GV Sbjct: 663 AVNLSPAQFRSKELVPVVIGALASSGVAPHRLELEVTETVIMHDSEAVFAVLGQLRELGV 722 Query: 684 RISLDDFGTGYSSLSYLRSFPFDKIKIDRSFVTDLAT-REDSMAIVRAVTGLGKSLGIVT 742 RI+LDDFGTGYSSLS+L+ FPFDKIKIDRSFV +L++ R ++ + RAV SLG T Sbjct: 723 RIALDDFGTGYSSLSFLQKFPFDKIKIDRSFVNELSSARAEARHLARAVVRFAVSLGKTT 782 Query: 743 TAEGVETDTQFDLLRQEGCTQAQGYLFSPPRPAADVAKML 782 TAEGVET Q D+L +EGC + QGY FS P PA+D+A+ML Sbjct: 783 TAEGVETKEQLDILCEEGCLETQGYYFSRPMPASDIARML 822 >ref|ZP_07028093.1| diguanylate cyclase/phosphodiesterase with MHYT sensor [Afipia sp. 1NLS2] gb|EFI50914.1| diguanylate cyclase/phosphodiesterase with MHYT sensor [Afipia sp. 1NLS2] Length = 806 Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust. Identities = 330/788 (41%), Positives = 476/788 (60%), Gaps = 9/788 (1%) Query: 2 EHDWRLVVLGAVICLLASAVAISLFHRARAA-QGRAREIWIGLDAAVGGCGIWATHFVAM 60 +HDWRLV+L A +CLL S AI+++ RA A + +R W VGGCG+WATHF+ M Sbjct: 11 QHDWRLVLLAAGVCLLTSISAINMYQRATADDKATSRLFWALTAGLVGGCGVWATHFIGM 70 Query: 61 LAYDPGIEAGYNIPITLLSLVLAVAILAVGLAVATLDERWRTVAAGGAIVGAGVAAMHYT 120 LAY PG+ ++ +T+ SL +A+ ++ VG AT +R GG I+GA ++ MHY Sbjct: 71 LAYTPGVSISFDFLMTVASLGVAIVMMVVGFITATYGDRTWAPLIGGGILGAAISLMHYL 130 Query: 121 GMLGLELPARIVWSPGIVASSIAFGSLFGALALVVATRGERFGTVAAATGLLTVAIVSHH 180 G+ L +PA IVW P ++A SIA G FGAL+L V RGE A GLL VAI++ H Sbjct: 131 GIASLRMPADIVWMPDLLAVSIACGVGFGALSLSVVRRGETVWFGAIGAGLLMVAILTDH 190 Query: 181 FTAMGAVTLVPDPTIVSGGLTVSPRVLSFMTAVAVFAILGLSLIASILDRRAKTELHKQK 240 F AM A+ L+ D T S + +SP LS A + A + LI++I DRR++ +++++ Sbjct: 191 FIAMSAMGLISDVTATSENVGLSPIALSVGVASVMAAFVVACLISAISDRRSRRDINERN 250 Query: 241 VVLDTALENMSQGLCMFDADGRIMLFNERYSEMMGRSRMPLQ-GRLLIDVLQDLHSIGEW 299 + L+ A++NM QGLCMF D + L+NE+Y M + ++ G + D+ G Sbjct: 251 IQLNAAIDNMRQGLCMFGPDNCLQLWNEKYVGMYKIAPEDIRVGMTVDDMFAARKKAGTI 310 Query: 300 DGDPEEFCNALVAEAKAGHSATRIVSR--NERAIRVVDQPMKGGGWVATFEDITEWQQAQ 357 D + + + L + TR + + R I V Q M+ GGWV T EDITE ++++ Sbjct: 311 VKDLDSYSSHLWNSVE-NREFTRWILELVDGRTISVSYQSMENGGWVGTHEDITEQRKSE 369 Query: 358 EQISHMARHDALTNLPNRTLFREQLEKASRLAKRSDQ-LAVLCLDLDHFKEINDTLGHPI 416 QI ++A+HD+LT L NR F E + K A R + +L LD+D F EINDT GH Sbjct: 370 AQIQYLAQHDSLTGLFNRAAFNEHVHKVWEEAMREQRSFTILSLDIDRFSEINDTYGHSA 429 Query: 417 GDALLREVARRLGECVTEHDTVARLGGDEFAIVQFCSNCEPSVVSSLASLVVERIAAPYE 476 GD L E ARRL + +ARLGGDEF IV +P+ + + V+ + Sbjct: 430 GDTFLDEAARRL-QAACGSAFIARLGGDEFMIVS-SEGEQPARAGDICTRVLTAFEMTFH 487 Query: 477 IGGHQLVIGVSIGISLAPEDGKDPDELLQKADLALYRAKADGRGTYRFFETGMDARAQAR 536 I GH + G ++G+S+ P+DG D + L+ AD+ALYRAK + RG+ RFFE MD + + + Sbjct: 488 IEGHPIHSGCTVGVSIFPQDGADVETLITNADVALYRAKKEERGSVRFFEPAMDKQLREK 547 Query: 537 RLLERDLRLALEHDEFEVYYQPIRDVAGGQVVAFEALARWNHSLRGLIAPNNFIPVAEET 596 R L DL +A+ + + E++YQP + G FE L RW H +GLIAP FIP+AEET Sbjct: 548 RALLHDLGVAIGNGQLELHYQP-QGGPDGNPFGFETLVRWRHPAKGLIAPGAFIPLAEET 606 Query: 597 GLIVPLGEIVLRKACADAAGWPEAVAVAVNLSPVQFKNPNLVSSVKAALQASGLSPDRLE 656 G IV + +LR+AC +AA WP + +A+N+SP+ F+ +L + + L +GL+P RLE Sbjct: 607 GSIVAIDAWILREACREAASWPNPLQIAINVSPMSFQQNDLPGLIHSILLETGLNPKRLE 666 Query: 657 LEITESVLLQNSEATLAVLHELRGFGVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFVT 716 +EITE VL+Q+ ++L ++ GVRI++DDFGTGYSSLSYL+SFPFDKIKID++FV Sbjct: 667 IEITEGVLMQDFSRACSILRRIKNLGVRIAMDDFGTGYSSLSYLQSFPFDKIKIDQTFVA 726 Query: 717 DLATREDSMAIVRAVTGLGKSLGIVTTAEGVETDTQFDLLRQEGCTQAQGYLFSPPRPAA 776 + S AI+RA+ LG++L + AEGVET+ Q D L GCT+ QGYL P+P + Sbjct: 727 QIHKNVQSSAIIRAIISLGEALNLGVIAEGVETEAQRDFLADAGCTEMQGYLLGRPQPIS 786 Query: 777 DVAKMLRR 784 ++ R Sbjct: 787 AYNPIIGR 794 >ref|YP_004632296.1| GGDEF/EAL domain-containing protein [Oligotropha carboxidovorans OM5] gb|AEI02479.1| GGDEF/EAL domain protein [Oligotropha carboxidovorans OM4] gb|AEI06055.1| GGDEF/EAL domain protein [Oligotropha carboxidovorans OM5] Length = 804 Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust. Identities = 315/791 (39%), Positives = 475/791 (60%), Gaps = 6/791 (0%) Query: 2 EHDWRLVVLGAVICLLASAVAISLFHRARAAQGRAREIWIGLDAAVGGCGIWATHFVAML 61 +HDWRLV+L A +C+LAS I+++ RARA + ++R W V GCG+W+THF+ ML Sbjct: 11 QHDWRLVLLAAGVCVLASIATINMYQRARANKAKSRLFWTLAAGLVCGCGVWSTHFIGML 70 Query: 62 AYDPGIEAGYNIPITLLSLVLAVAILAVGLAVATLDERWRTVAAGGAIVGAGVAAMHYTG 121 AY PG+ ++ +T++S +AV ++ G A ER + GG IVG ++ MH+ G Sbjct: 71 AYSPGVPITFDFTMTMVSFAVAVVMMTAGFVAAIYGERTWSSLVGGVIVGIAISVMHHLG 130 Query: 122 MLGLELPARIVWSPGIVASSIAFGSLFGALALVVATRGERFGTVAAATGLLTVAIVSHHF 181 ++ L + A IVW P ++ S G +F L+L +G A LL A +S H Sbjct: 131 IVALRMSADIVWMPDLLVLSAVCGIVFSTLSLFTVRQGTAITHSGIAAALLATATLSDHI 190 Query: 182 TAMGAVTLVPDPTIVSGGLTVSPRVLSFMTAVAVFAILGLSLIASILDRRAKTELHKQKV 241 A+ A+ L+PD VS +SP VLS A + AI+ LI +I DRR++ ++++ + Sbjct: 191 IAVSAIGLIPDINTVSDEAGLSPIVLSISVASMMVAIVIACLIGAISDRRSRRHMNERNI 250 Query: 242 VLDTALENMSQGLCMFDADGRIMLFNERYSEMMGRSRMPLQ-GRLLIDVLQDLHSIGEWD 300 L+ A++N+ QGLCMF D + L+N++Y M + ++ G + ++ G Sbjct: 251 QLNAAIQNIMQGLCMFGPDNCLQLWNDKYVSMYRIAPEDIRVGATVEELFAARKKAGTIV 310 Query: 301 GDPEEFCNALVAEAKAGHSATRIVSR-NERAIRVVDQPMKGGGWVATFEDITEWQQAQEQ 359 + + + L K SA ++ + R I V Q M+ GGWV T EDITE ++++ + Sbjct: 311 KELDFYSTRLWDSVKNRESARWVLELVDGRTISVAYQAMENGGWVGTHEDITEQRKSEAR 370 Query: 360 ISHMARHDALTNLPNRTLFREQLEKA-SRLAKRSDQLAVLCLDLDHFKEINDTLGHPIGD 418 I ++A+HD+LT L NR F + + K + A + +L LD+D F EINDT GH GD Sbjct: 371 IQYLAQHDSLTGLFNRVAFNDHVRKVWQKAAAQKHPFTILSLDIDRFSEINDTYGHSTGD 430 Query: 419 ALLREVARRLGECVTEHDTVARLGGDEFAIVQFCSNCEPSVVSSLASLVVERIAAPYEIG 478 A LRE ARRL + +ARLGGDEF IV +P+ + + V+ + I Sbjct: 431 AFLREAARRL-QAACGSAFIARLGGDEFMIVS-SEGEQPARAGDICTRVLTAFEMMFNID 488 Query: 479 GHQLVIGVSIGISLAPEDGKDPDELLQKADLALYRAKADGRGTYRFFETGMDARAQARRL 538 GH + G ++G+S+ P+DG+D + L+ A +ALYRAK + RG+ RFFE MD + + +R+ Sbjct: 489 GHAIHSGCTVGVSIYPQDGEDIETLISNAGVALYRAKKEERGSIRFFEPEMDRQLREKRV 548 Query: 539 LERDLRLALEHDEFEVYYQPIRDVAGGQVVAFEALARWNHSLRGLIAPNNFIPVAEETGL 598 + DL L LE+ + E+++QP D G FEAL RW H +GL+ P F+P+AEETG Sbjct: 549 MLHDLDLVLENKQLELHFQPQAD-PDGTPFGFEALVRWRHPEKGLVPPGVFVPLAEETGA 607 Query: 599 IVPLGEIVLRKACADAAGWPEAVAVAVNLSPVQFKNPNLVSSVKAALQASGLSPDRLELE 658 IV + E +LRKAC +AA WP+ +++A+N+SP+ F++ +L + + L +GL+P RLE+E Sbjct: 608 IVAIDEWILRKACQEAASWPKPLSIAINVSPMSFQHNDLPGLIHSILLETGLNPKRLEIE 667 Query: 659 ITESVLLQNSEATLAVLHELRGFGVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFVTDL 718 ITE VL+Q+ ++L ++ GVR+++DDFGTGYSSLSYL+SFPFDKIKID++FV + Sbjct: 668 ITEGVLVQDFSRACSILRRIKNLGVRVAMDDFGTGYSSLSYLQSFPFDKIKIDQAFVAQI 727 Query: 719 ATREDSMAIVRAVTGLGKSLGIVTTAEGVETDTQFDLLRQEGCTQAQGYLFSPPRPAADV 778 S AI+RA+ LG++L + AEGVET+ Q D L GC + QGYL P+P A Sbjct: 728 NKNVQSSAIIRAIISLGEALNLGVIAEGVETELQRDFLADAGCFEMQGYLIGRPQPIAAY 787 Query: 779 AKMLRRAPERS 789 A ++ R PE S Sbjct: 788 AGIVGRPPETS 798