BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0217.0010.p (371 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772496.1| hypothetical protein bll5856 [Bradyrhizobium ja... 360 2e-97 ref|YP_576613.1| FAD dependent oxidoreductase [Nitrobacter hambu... 355 8e-96 ref|YP_317712.1| FAD dependent oxidoreductase [Nitrobacter winog... 347 2e-93 ref|YP_001206980.1| putative FAD dependent oxidoreductase [Brady... 343 2e-92 ref|ZP_01046012.1| FAD dependent oxidoreductase [Nitrobacter sp.... 343 3e-92 >ref|NP_772496.1| hypothetical protein bll5856 [Bradyrhizobium japonicum USDA 110] dbj|BAC51121.1| bll5856 [Bradyrhizobium japonicum USDA 110] Length = 485 Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 188/249 (75%), Positives = 214/249 (85%), Gaps = 6/249 (2%) Query: 1 MSESSTSAADGPDQADSPFGDR--LAFDLDVDICVVGAGLAGLTVAREAARLGASVAVLE 58 MSE+ TS + Q ++ F +R L+FDLD DICV+GAGLAGL++A EAARLGASVAVLE Sbjct: 1 MSETFTSVS----QEEAGFRERARLSFDLDADICVIGAGLAGLSIALEAARLGASVAVLE 56 Query: 59 GRQIGWNASGHHLGTVMPGFGLPMTEVIERVGLDDARELWALSKEGADYVRATATEDLIP 118 GR IGWNASG+ LGTVMPGF LP+T++IER+G +DARELW LSKEGA++VRA ATE+ +P Sbjct: 57 GRHIGWNASGNQLGTVMPGFALPLTDLIERIGFEDARELWTLSKEGAEFVRANATEENMP 116 Query: 119 GIKPSDGALEVSNVDVGEALIGRLQTLGEDFATGVEGWQVDRVRSVLRTGRYFHGIYYPK 178 GI PSDG LEVSNVD G+ LI RLQ L EDF T VEGWQVDRVR VL+T RYFHG+YYPK Sbjct: 117 GIAPSDGVLEVSNVDTGDRLISRLQMLHEDFDTEVEGWQVDRVRDVLKTDRYFHGVYYPK 176 Query: 179 AFQIDGRKYVHGLAALAMRAGVRIFEETPVVSIDFSGIRKRIVTPTARLRANHIVLAGNI 238 AFQ+DGRKYVHGLAALA RAG RIFE+TPVVSID SGIRKRIVTP+ARLRA HIVLAGNI Sbjct: 177 AFQVDGRKYVHGLAALARRAGARIFEDTPVVSIDHSGIRKRIVTPSARLRATHIVLAGNI 236 Query: 239 HLGAPLKRL 247 HLGAPL+RL Sbjct: 237 HLGAPLRRL 245 >ref|YP_576613.1| FAD dependent oxidoreductase [Nitrobacter hamburgensis X14] gb|ABE62153.1| FAD dependent oxidoreductase [Nitrobacter hamburgensis X14] Length = 457 Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 179/249 (71%), Positives = 203/249 (81%), Gaps = 3/249 (1%) Query: 2 SESSTSAADGPDQADS---PFGDRLAFDLDVDICVVGAGLAGLTVAREAARLGASVAVLE 58 SES +AA D A + P RL DLDVDICVVGAGLAGLTVA EAAR GASV VLE Sbjct: 3 SESMAAAAGSGDTAFAVAPPQRARLTVDLDVDICVVGAGLAGLTVALEAARTGASVVVLE 62 Query: 59 GRQIGWNASGHHLGTVMPGFGLPMTEVIERVGLDDARELWALSKEGADYVRATATEDLIP 118 GR +GWNASGHHLGTVMPG+ LP+ ++I RVG DDA ELW+LS++GADYVRA A E++IP Sbjct: 63 GRHVGWNASGHHLGTVMPGYALPLPDLIARVGFDDAWELWSLSQQGADYVRAHAAENVIP 122 Query: 119 GIKPSDGALEVSNVDVGEALIGRLQTLGEDFATGVEGWQVDRVRSVLRTGRYFHGIYYPK 178 G+ S+GALEVSNVD G+ LIG LQ L EDFAT VEGWQ+DRVR LRTGRYFH ++YP+ Sbjct: 123 GLALSEGALEVSNVDAGDRLIGHLQMLSEDFATEVEGWQIDRVRDTLRTGRYFHAVHYPR 182 Query: 179 AFQIDGRKYVHGLAALAMRAGVRIFEETPVVSIDFSGIRKRIVTPTARLRANHIVLAGNI 238 AFQIDGR+YVHGLA LA AG RIFEETPVVSID GIRKRIVTP ARLRA+H+VLAGN+ Sbjct: 183 AFQIDGRRYVHGLAELAGNAGARIFEETPVVSIDPFGIRKRIVTPQARLRASHVVLAGNV 242 Query: 239 HLGAPLKRL 247 HLG L+RL Sbjct: 243 HLGGALRRL 251 >ref|YP_317712.1| FAD dependent oxidoreductase [Nitrobacter winogradskyi Nb-255] gb|ABA04360.1| FAD dependent oxidoreductase [Nitrobacter winogradskyi Nb-255] Length = 457 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 169/251 (67%), Positives = 200/251 (79%), Gaps = 4/251 (1%) Query: 1 MSESSTSAADGPDQADSPFG----DRLAFDLDVDICVVGAGLAGLTVAREAARLGASVAV 56 M+ +AADGP +S +RL FDLDV+ICVVG GLAGLTVA EAAR GA+V V Sbjct: 1 MTSDGMAAADGPGDTESAVRARRRERLTFDLDVEICVVGGGLAGLTVALEAARTGANVVV 60 Query: 57 LEGRQIGWNASGHHLGTVMPGFGLPMTEVIERVGLDDARELWALSKEGADYVRATATEDL 116 LEGR +GWNASGHHLGTVMPG+ LP++++I RVG DDA +LW+L++ GADYVRA A E + Sbjct: 61 LEGRHVGWNASGHHLGTVMPGYALPLSDLIARVGFDDAYDLWSLARAGADYVRAHAAEHI 120 Query: 117 IPGIKPSDGALEVSNVDVGEALIGRLQTLGEDFATGVEGWQVDRVRSVLRTGRYFHGIYY 176 IPG+ ++G LEVSNVD GE LI LQ L EDF+T VEGWQ+DRVR LRTGRYFH ++Y Sbjct: 121 IPGLGLTEGVLEVSNVDAGERLISHLQMLSEDFSTEVEGWQIDRVRDTLRTGRYFHAVHY 180 Query: 177 PKAFQIDGRKYVHGLAALAMRAGVRIFEETPVVSIDFSGIRKRIVTPTARLRANHIVLAG 236 P+AFQIDGRKYVHGLA LA +AG RIFE+TPVV ID GIRKRI TP ARLRA+H+VLAG Sbjct: 181 PRAFQIDGRKYVHGLAELARKAGARIFEDTPVVGIDPFGIRKRIATPRARLRASHLVLAG 240 Query: 237 NIHLGAPLKRL 247 N+HLG L+RL Sbjct: 241 NVHLGGALRRL 251 >ref|YP_001206980.1| putative FAD dependent oxidoreductase [Bradyrhizobium sp. ORS 278] emb|CAL78763.1| Putative FAD dependent oxidoreductase [Bradyrhizobium sp. ORS 278] Length = 475 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 175/247 (70%), Positives = 204/247 (82%), Gaps = 2/247 (0%) Query: 1 MSESSTSAADGPDQADSPFGDRLAFDLDVDICVVGAGLAGLTVAREAARLGASVAVLEGR 60 MSE+ TSA D D A RL FDLDVD+CVVGAGLAGLT A AAR GASVAVLEGR Sbjct: 1 MSETFTSANDDADAAGVVARTRLNFDLDVDVCVVGAGLAGLTTALCAARQGASVAVLEGR 60 Query: 61 QIGWNASGHHLGTVMPGFGLPMTEVIERVGLDDARELWALSKEGADYVRATATEDLIPGI 120 Q+GWNASG +GTV+PGF L + ++IERVGL+ AR LWALS+EGA+++RA A +PGI Sbjct: 61 QVGWNASGAMVGTVLPGFDLALPDLIERVGLERARALWALSREGAEFIRAQAAS--MPGI 118 Query: 121 KPSDGALEVSNVDVGEALIGRLQTLGEDFATGVEGWQVDRVRSVLRTGRYFHGIYYPKAF 180 S+GALEVSNVD G+ALI RLQ L EDF T VEGWQV+RVRS L+T RYFHG++YP+AF Sbjct: 119 ALSEGALEVSNVDAGDALIRRLQMLHEDFDTEVEGWQVERVRSELKTSRYFHGVHYPRAF 178 Query: 181 QIDGRKYVHGLAALAMRAGVRIFEETPVVSIDFSGIRKRIVTPTARLRANHIVLAGNIHL 240 Q+DGRKYVH LA LA RAG RIFE+TPVVSID SG+RKRIVTP+AR+RA+HIVLAGNIHL Sbjct: 179 QLDGRKYVHALARLAHRAGARIFEDTPVVSIDASGVRKRIVTPSARMRASHIVLAGNIHL 238 Query: 241 GAPLKRL 247 GAPL++L Sbjct: 239 GAPLQKL 245 >ref|ZP_01046012.1| FAD dependent oxidoreductase [Nitrobacter sp. Nb-311A] gb|EAQ36096.1| FAD dependent oxidoreductase [Nitrobacter sp. Nb-311A] Length = 471 Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 167/251 (66%), Positives = 199/251 (79%), Gaps = 4/251 (1%) Query: 1 MSESSTSAADGPDQADSP----FGDRLAFDLDVDICVVGAGLAGLTVAREAARLGASVAV 56 M+ S +AAD P A+S ++L FDLDV+ICVVG GLAGLTVA EAAR GA+V V Sbjct: 6 MTSESINAADIPGNAESAGQARRHEQLTFDLDVEICVVGGGLAGLTVALEAARTGANVVV 65 Query: 57 LEGRQIGWNASGHHLGTVMPGFGLPMTEVIERVGLDDARELWALSKEGADYVRATATEDL 116 LE R +GW+ASGHHLGT MPG+ LP++++I RVG DDA ELW+LS+ GADYVRA A ED+ Sbjct: 66 LESRHVGWSASGHHLGTAMPGYALPLSDLIARVGFDDAYELWSLSRAGADYVRAHAAEDV 125 Query: 117 IPGIKPSDGALEVSNVDVGEALIGRLQTLGEDFATGVEGWQVDRVRSVLRTGRYFHGIYY 176 IPG+ ++G LEVSNVD GE LI LQ L EDFAT EGWQ+DRVR+ L T RYFH ++Y Sbjct: 126 IPGLGFTEGVLEVSNVDAGERLISHLQMLSEDFATEAEGWQIDRVRNALSTDRYFHAVHY 185 Query: 177 PKAFQIDGRKYVHGLAALAMRAGVRIFEETPVVSIDFSGIRKRIVTPTARLRANHIVLAG 236 P+AFQIDGRKY+HGLA LA +AG RIFE TPV+SID SGIRKRI TP ARLRA+H+VLAG Sbjct: 186 PRAFQIDGRKYIHGLAELARKAGARIFEHTPVISIDPSGIRKRIATPRARLRASHVVLAG 245 Query: 237 NIHLGAPLKRL 247 N+HLG L+RL Sbjct: 246 NVHLGEALRRL 256