BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0217.0001.p (205 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773788.1| hypothetical protein bll7148 [Bradyrhizobium ja... 290 6e-77 ref|ZP_01045363.1| TPR repeat protein [Nitrobacter sp. Nb-311A] ... 290 9e-77 ref|YP_578697.1| TPR repeat-containing protein [Nitrobacter hamb... 289 2e-76 ref|YP_319318.1| TPR repeat-containing protein [Nitrobacter wino... 288 3e-76 ref|ZP_08627418.1| TPR repeat-containing exported protein [Brady... 286 2e-75 >ref|NP_773788.1| hypothetical protein bll7148 [Bradyrhizobium japonicum USDA 110] dbj|BAC52413.1| bll7148 [Bradyrhizobium japonicum USDA 110] Length = 398 Score = 290 bits (743), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 160/224 (71%), Positives = 174/224 (77%), Gaps = 24/224 (10%) Query: 2 PHRRGRGDAFDPTQNPNAPGAPRVLGGGGQMPVQSNAAVGAPGGRGAGEPGVRLIFGTTG 61 P R RGDAFDP+QNP+APGAPR LGGG Q P+ + GAPGGR AGEP L T Sbjct: 179 PGTRRRGDAFDPSQNPSAPGAPRALGGG-QQPMSAGVPGGAPGGRNAGEP---LDLANTS 234 Query: 62 ------------------RQGPPGASAA--LTTLPPSATPKDEFDLGIGYMQRKDYALAE 101 +QG P +A LTTLPPSATP+DEFDLGIGYMQRKDYALAE Sbjct: 235 PRYQQGVPPAAQPGYPPVQQGSPAPAAGTGLTTLPPSATPRDEFDLGIGYMQRKDYALAE 294 Query: 102 ETMKNFAVKYPSDPLVADSQYWLGESYFQRQQYRDAAETFLGVTTKFDKSAKAPDALLRL 161 +TMKNFA KYPSDPL+ D+QYWLGESYFQRQQYRD+AE FL VTTK++KSAKAPDALLRL Sbjct: 295 QTMKNFAQKYPSDPLLGDAQYWLGESYFQRQQYRDSAEAFLAVTTKYEKSAKAPDALLRL 354 Query: 162 GQSLAALKEKEAACAAFGEISRKYPRASGGVKAAVDREQKRVKC 205 GQSLAALKEKEAACAAFGE+ RKYPRAS GVKAAVDREQKRVKC Sbjct: 355 GQSLAALKEKEAACAAFGEVGRKYPRASAGVKAAVDREQKRVKC 398 >ref|ZP_01045363.1| TPR repeat protein [Nitrobacter sp. Nb-311A] gb|EAQ36691.1| TPR repeat protein [Nitrobacter sp. Nb-311A] Length = 307 Score = 290 bits (742), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 152/213 (71%), Positives = 168/213 (78%), Gaps = 14/213 (6%) Query: 2 PHRRGRGDAFDPTQNPNAPGAPRVLGGGGQMPVQSNAAVGAPGGRGAGEPGVRLIFGTTG 61 P + RGDAFDP++NPNAPGAPR LGGG QMP+ + AAVG+PGGR AG P L G Sbjct: 100 PAQGHRGDAFDPSRNPNAPGAPRALGGG-QMPI-AAAAVGSPGGREAGAP---LDLANVG 154 Query: 62 RQ---------GPPGASAALTTLPPSATPKDEFDLGIGYMQRKDYALAEETMKNFAVKYP 112 + P + LTTLPPSATP+DEFDLGIGYMQRKDYALAEETM+NF KYP Sbjct: 155 PRPSGNYPTAGNAPLHTGGLTTLPPSATPRDEFDLGIGYMQRKDYALAEETMRNFTQKYP 214 Query: 113 SDPLVADSQYWLGESYFQRQQYRDAAETFLGVTTKFDKSAKAPDALLRLGQSLAALKEKE 172 SD L D+QYWLGES FQRQ+YR+AAE FLGVTTK+D SAKA DALLRLGQSLAALKEKE Sbjct: 215 SDTLTGDAQYWLGESLFQRQKYREAAEVFLGVTTKYDSSAKAADALLRLGQSLAALKEKE 274 Query: 173 AACAAFGEISRKYPRASGGVKAAVDREQKRVKC 205 AACAA GE++RKYPRAS GVK AVDREQKRVKC Sbjct: 275 AACAALGEVTRKYPRASAGVKQAVDREQKRVKC 307 >ref|YP_578697.1| TPR repeat-containing protein [Nitrobacter hamburgensis X14] gb|ABE64237.1| TPR repeat protein [Nitrobacter hamburgensis X14] Length = 336 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 152/214 (71%), Positives = 168/214 (78%), Gaps = 14/214 (6%) Query: 1 MPHRRGRGDAFDPTQNPNAPGAPRVLGGGGQMPVQSNAAVGAPGGRGAGEPGVRLIFGTT 60 +P + RGDAFDP+QNPNAPG PR LGGG QMP+ + AA G+PGGR AG P L T Sbjct: 128 VPAQGHRGDAFDPSQNPNAPGVPRALGGG-QMPMPAEAA-GSPGGREAGAP---LDLANT 182 Query: 61 GRQGP---------PGASAALTTLPPSATPKDEFDLGIGYMQRKDYALAEETMKNFAVKY 111 + P P + LTTLPPSATP+DEFDLGIGYMQRKDYALAEETM+NF KY Sbjct: 183 SPRRPGGYPTPDSAPPNTGGLTTLPPSATPRDEFDLGIGYMQRKDYALAEETMRNFTQKY 242 Query: 112 PSDPLVADSQYWLGESYFQRQQYRDAAETFLGVTTKFDKSAKAPDALLRLGQSLAALKEK 171 PSD L D+QYWLGES FQRQ+YR+AAE FLGVTTKFD SAKA DALLRLGQSLAALKEK Sbjct: 243 PSDALTGDAQYWLGESLFQRQKYREAAEAFLGVTTKFDSSAKASDALLRLGQSLAALKEK 302 Query: 172 EAACAAFGEISRKYPRASGGVKAAVDREQKRVKC 205 EAACAA GE++RKYPRAS GVK AVDREQKR+KC Sbjct: 303 EAACAALGEVTRKYPRASAGVKQAVDREQKRIKC 336 >ref|YP_319318.1| TPR repeat-containing protein [Nitrobacter winogradskyi Nb-255] gb|ABA05966.1| TPR repeat protein [Nitrobacter winogradskyi Nb-255] Length = 305 Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 148/205 (72%), Positives = 164/205 (80%), Gaps = 8/205 (3%) Query: 7 RGDAFDPTQNPNAPGAPRVLGGGGQMPVQSNAAVGAPGGRGAGEP------GVRLIFGTT 60 RGDAFDP+QNP APGAPR LGGG QMP+ AAVG+PGGR AG P G R Sbjct: 103 RGDAFDPSQNPGAPGAPRALGGG-QMPI-PTAAVGSPGGREAGAPLDLANVGPRSSVSHP 160 Query: 61 GRQGPPGASAALTTLPPSATPKDEFDLGIGYMQRKDYALAEETMKNFAVKYPSDPLVADS 120 P ++ LTTLPPSATP+D+FDLGIGYMQRKDYALAEETM++F KYPSD L D+ Sbjct: 161 AAGSAPLSTGGLTTLPPSATPRDQFDLGIGYMQRKDYALAEETMRSFTEKYPSDTLTGDA 220 Query: 121 QYWLGESYFQRQQYRDAAETFLGVTTKFDKSAKAPDALLRLGQSLAALKEKEAACAAFGE 180 QYWLGES FQRQ+YR+AAE FLGVTTK+D SAK DALLRLGQSLAALKEKEAACAAFGE Sbjct: 221 QYWLGESLFQRQKYREAAEAFLGVTTKYDSSAKVADALLRLGQSLAALKEKEAACAAFGE 280 Query: 181 ISRKYPRASGGVKAAVDREQKRVKC 205 ++RKYPRAS GVK AVDREQ+RVKC Sbjct: 281 VTRKYPRASAGVKQAVDREQRRVKC 305 >ref|ZP_08627418.1| TPR repeat-containing exported protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP10044.1| TPR repeat-containing exported protein [Bradyrhizobiaceae bacterium SG-6C] Length = 316 Score = 286 bits (731), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 147/211 (69%), Positives = 168/211 (79%), Gaps = 14/211 (6%) Query: 7 RGDAFDPTQNPNAPGAPRVLGGGGQMPVQSNAAVGAPGGRGAGEP-------GVRLIFGT 59 RGDAFDP++NPNAPG PR LGGG QMPV + VGAPGGR AGEP G R +GT Sbjct: 108 RGDAFDPSRNPNAPGVPRALGGG-QMPV-TEGPVGAPGGRDAGEPLNLSNVGGARDPYGT 165 Query: 60 TG-----RQGPPGASAALTTLPPSATPKDEFDLGIGYMQRKDYALAEETMKNFAVKYPSD 114 Q P +A+LTTLPPSA+P+DEFDLGIGY+QRKDYALAEETM+NFA KYP+D Sbjct: 166 NAPAQRPVQQAPNTTASLTTLPPSASPRDEFDLGIGYIQRKDYALAEETMRNFAQKYPTD 225 Query: 115 PLVADSQYWLGESYFQRQQYRDAAETFLGVTTKFDKSAKAPDALLRLGQSLAALKEKEAA 174 L+ DSQYWLGES +QRQ+YRDAAE FLGVTTK++ + KAPD+LLRLGQSLAALKEKEAA Sbjct: 226 ALLPDSQYWLGESLYQRQKYRDAAEVFLGVTTKYETAGKAPDSLLRLGQSLAALKEKEAA 285 Query: 175 CAAFGEISRKYPRASGGVKAAVDREQKRVKC 205 CAAFGE++RKYPRA+ GVK V REQKR C Sbjct: 286 CAAFGEVTRKYPRATNGVKQGVAREQKRAGC 316