BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0216.0009.p (239 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767017.1| hypothetical protein bll0377 [Bradyrhizobium ja... 447 e-124 ref|YP_001208788.1| hypothetical protein BRADO6987 [Bradyrhizobi... 409 e-112 ref|YP_001236727.1| hypothetical protein BBta_0540 [Bradyrhizobi... 409 e-112 ref|ZP_06898039.1| fumarylacetoacetate hydrolase [Roseomonas cer... 391 e-107 ref|YP_001754797.1| hypothetical protein Mrad2831_2119 [Methylob... 381 e-104 >ref|NP_767017.1| hypothetical protein bll0377 [Bradyrhizobium japonicum USDA 110] dbj|BAC45642.1| bll0377 [Bradyrhizobium japonicum USDA 110] Length = 239 Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust. Identities = 213/239 (89%), Positives = 227/239 (94%) Query: 1 MSKLSDATRNKLKSVSTATVATALFRRGFRIQMIQDVHPLGPDQPTMVGEAFTLRYMPAR 60 M+KLS+ATRNKLKSVSTATVATALF+RG RIQMIQDVHPLGPDQPTMVGEAFTLRYMPAR Sbjct: 1 MTKLSEATRNKLKSVSTATVATALFKRGLRIQMIQDVHPLGPDQPTMVGEAFTLRYMPAR 60 Query: 61 EDLNKIEVFRDRAHPQRKAIEDCPVGAVLVMDSRKDARAASAGAILVTRLMKRGCAGVVT 120 EDLN I+VF+DR+HPQRKA+EDCP G+VLVMDSRKDARAASAGAILVTRLMKRG AGVVT Sbjct: 61 EDLNTIDVFKDRSHPQRKAVEDCPAGSVLVMDSRKDARAASAGAILVTRLMKRGVAGVVT 120 Query: 121 DGGFRDSAEIARLGFPAFHHRPSAPTNLTLHQAIEINVPIGCGDAPVFPGDVILGDSDGV 180 DGGFRDSAEIA+LG PA+HHRPSAPTNLTLHQAIEINVPIGCGDAPVFPGDVILGD+DGV Sbjct: 121 DGGFRDSAEIAKLGIPAYHHRPSAPTNLTLHQAIEINVPIGCGDAPVFPGDVILGDADGV 180 Query: 181 IVIPAHLADEIADETFEMTAFEDFVTEQVQNGRGIFGLYPATDEQTLKDFAAWRKAKGR 239 IVIPAHLAD+IA+ETFEMTAFEDFVTE+V GRGIFGLYPATD QTL DFA WRK GR Sbjct: 181 IVIPAHLADDIANETFEMTAFEDFVTEEVGKGRGIFGLYPATDPQTLTDFAEWRKKNGR 239 >ref|YP_001208788.1| hypothetical protein BRADO6987 [Bradyrhizobium sp. ORS 278] emb|CAL80573.1| conserved hypothetical protein; putative Demethylmenaquinone methyltransferase [Bradyrhizobium sp. ORS 278] Length = 239 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 200/239 (83%), Positives = 211/239 (88%) Query: 1 MSKLSDATRNKLKSVSTATVATALFRRGFRIQMIQDVHPLGPDQPTMVGEAFTLRYMPAR 60 M+KLS ATRNKLK+VSTATVATALF+RG RIQ IQ+VHPL P QPTMVGEAFTLRY+PAR Sbjct: 1 MTKLSTATRNKLKTVSTATVATALFKRGLRIQCIQNVHPLSPQQPTMVGEAFTLRYIPAR 60 Query: 61 EDLNKIEVFRDRAHPQRKAIEDCPVGAVLVMDSRKDARAASAGAILVTRLMKRGCAGVVT 120 EDLN I+VFRDR HPQRKA+EDCP GAVLVMDSRKDARAASAGAILV+RL +RG AGVVT Sbjct: 61 EDLNTIDVFRDRGHPQRKAVEDCPPGAVLVMDSRKDARAASAGAILVSRLQQRGVAGVVT 120 Query: 121 DGGFRDSAEIARLGFPAFHHRPSAPTNLTLHQAIEINVPIGCGDAPVFPGDVILGDSDGV 180 DGGFRDSAEIA+LG PAFH RPSAPTNLTLH AIEIN PI CGDAPVFPGDVILGDSDGV Sbjct: 121 DGGFRDSAEIAKLGIPAFHQRPSAPTNLTLHHAIEINGPIACGDAPVFPGDVILGDSDGV 180 Query: 181 IVIPAHLADEIADETFEMTAFEDFVTEQVQNGRGIFGLYPATDEQTLKDFAAWRKAKGR 239 IVIPA +ADEIADETFEMTAFEDFV EQV GR I GLYP TD QT DFAAWR GR Sbjct: 181 IVIPAGIADEIADETFEMTAFEDFVAEQVVQGRSILGLYPPTDPQTPADFAAWRAKNGR 239 >ref|YP_001236727.1| hypothetical protein BBta_0540 [Bradyrhizobium sp. BTAi1] gb|ABQ32821.1| hypothetical protein BBta_0540 [Bradyrhizobium sp. BTAi1] Length = 239 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 198/239 (82%), Positives = 212/239 (88%) Query: 1 MSKLSDATRNKLKSVSTATVATALFRRGFRIQMIQDVHPLGPDQPTMVGEAFTLRYMPAR 60 M+KLS ATRNKLK+VSTATVATALF+RG RIQ IQ+VHPL P QPTMVGEAFTLRY+PAR Sbjct: 1 MTKLSTATRNKLKTVSTATVATALFKRGLRIQCIQNVHPLSPQQPTMVGEAFTLRYIPAR 60 Query: 61 EDLNKIEVFRDRAHPQRKAIEDCPVGAVLVMDSRKDARAASAGAILVTRLMKRGCAGVVT 120 EDLN IEVF+DR HPQRKA+E+CP GAVLVMDSRKDARAASAGAILV+RL +RG AGVVT Sbjct: 61 EDLNTIEVFKDRGHPQRKAVEECPPGAVLVMDSRKDARAASAGAILVSRLQQRGVAGVVT 120 Query: 121 DGGFRDSAEIARLGFPAFHHRPSAPTNLTLHQAIEINVPIGCGDAPVFPGDVILGDSDGV 180 DGGFRDSAEIA+LG PAFH RPSAPTNLTLH AIEIN PI CGDAPVFPGDVILGDSDGV Sbjct: 121 DGGFRDSAEIAKLGIPAFHQRPSAPTNLTLHHAIEINGPIACGDAPVFPGDVILGDSDGV 180 Query: 181 IVIPAHLADEIADETFEMTAFEDFVTEQVQNGRGIFGLYPATDEQTLKDFAAWRKAKGR 239 IVIPA +ADEIADETFEMTAFEDFV +QV GR I GLYP TD QT +DFAAWR GR Sbjct: 181 IVIPAGIADEIADETFEMTAFEDFVADQVAQGRSILGLYPPTDPQTPQDFAAWRARNGR 239 >ref|ZP_06898039.1| fumarylacetoacetate hydrolase [Roseomonas cervicalis ATCC 49957] gb|EFH10257.1| fumarylacetoacetate hydrolase [Roseomonas cervicalis ATCC 49957] Length = 238 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 190/236 (80%), Positives = 206/236 (87%) Query: 4 LSDATRNKLKSVSTATVATALFRRGFRIQMIQDVHPLGPDQPTMVGEAFTLRYMPAREDL 63 LS TR+KLK VSTAT+ATALF+RGFR QMIQ V PL P +MVGEAFTLRYMPAREDL Sbjct: 3 LSTETRDKLKQVSTATLATALFKRGFRTQMIQGVQPLRPMTESMVGEAFTLRYMPAREDL 62 Query: 64 NKIEVFRDRAHPQRKAIEDCPVGAVLVMDSRKDARAASAGAILVTRLMKRGCAGVVTDGG 123 NK+EVFRDR HPQRKA+EDCP GAVLVMDSRKDARAASAG ILVTRL +RG AGVVTDGG Sbjct: 63 NKLEVFRDRGHPQRKAVEDCPPGAVLVMDSRKDARAASAGGILVTRLQQRGVAGVVTDGG 122 Query: 124 FRDSAEIARLGFPAFHHRPSAPTNLTLHQAIEINVPIGCGDAPVFPGDVILGDSDGVIVI 183 FRDSAEIA L PA+H RPSAPTNLTLHQAI+INVPIGCGDAPVFPGDVI+GD+DGVIVI Sbjct: 123 FRDSAEIATLDMPAYHSRPSAPTNLTLHQAIDINVPIGCGDAPVFPGDVIVGDNDGVIVI 182 Query: 184 PAHLADEIADETFEMTAFEDFVTEQVQNGRGIFGLYPATDEQTLKDFAAWRKAKGR 239 PAHLADEIA+E EMTAFEDFVTE+V+ G+ I GLYP TDE L+ FAAWRK GR Sbjct: 183 PAHLADEIANEATEMTAFEDFVTEKVRGGQSILGLYPPTDESNLELFAAWRKQNGR 238 >ref|YP_001754797.1| hypothetical protein Mrad2831_2119 [Methylobacterium radiotolerans JCM 2831] gb|ACB24114.1| Dimethylmenaquinone methyltransferase [Methylobacterium radiotolerans JCM 2831] Length = 239 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 183/239 (76%), Positives = 206/239 (86%) Query: 1 MSKLSDATRNKLKSVSTATVATALFRRGFRIQMIQDVHPLGPDQPTMVGEAFTLRYMPAR 60 MS LS TR KLK+VSTAT+ TAL++RGFR QMIQ V PL PTMVGEA+TLRY+PAR Sbjct: 1 MSGLSPETRAKLKTVSTATLMTALYKRGFRNQMIQGVLPLKAGGPTMVGEAYTLRYIPAR 60 Query: 61 EDLNKIEVFRDRAHPQRKAIEDCPVGAVLVMDSRKDARAASAGAILVTRLMKRGCAGVVT 120 EDLN I VFRDRAHPQRKA+E+CP GAV+V+DSRKDARAASAG+IL TRLM RGCAG+VT Sbjct: 61 EDLNPITVFRDRAHPQRKAVEECPPGAVMVIDSRKDARAASAGSILATRLMVRGCAGLVT 120 Query: 121 DGGFRDSAEIARLGFPAFHHRPSAPTNLTLHQAIEINVPIGCGDAPVFPGDVILGDSDGV 180 DGGFRD+ EIARL P++H RPSAPTNLT+HQAI+INVPIGCGDAPVFPGDVI+GD DGV Sbjct: 121 DGGFRDADEIARLEMPSYHARPSAPTNLTVHQAIDINVPIGCGDAPVFPGDVIVGDGDGV 180 Query: 181 IVIPAHLADEIADETFEMTAFEDFVTEQVQNGRGIFGLYPATDEQTLKDFAAWRKAKGR 239 VIPAHLAD +ADE EMTA+EDFVTE+V+ GR I GLYPATDEQ+L DFAAWR GR Sbjct: 181 AVIPAHLADAVADEAVEMTAYEDFVTEEVRKGRTILGLYPATDEQSLADFAAWRTRTGR 239