BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0216.0005.p (353 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004618698.1| ABC transporter ATP-binding protein [Ramliba... 456 e-126 ref|NP_888614.1| ABC transporter ATP-binding protein [Bordetella... 335 7e-90 ref|NP_884851.1| ABC transport protein, ATP-binding component [B... 334 2e-89 ref|NP_881178.1| ABC transport protein, ATP-binding component [B... 333 2e-89 ref|YP_004154435.1| ABC transporter [Variovorax paradoxus EPS] >... 322 6e-86 >ref|YP_004618698.1| ABC transporter ATP-binding protein [Ramlibacter tataouinensis TTB310] gb|AEG92679.1| candidate ABC transporter, ATP-binding component probably involved in an Fe3+ transport system [Ramlibacter tataouinensis TTB310] Length = 354 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 223/354 (62%), Positives = 266/354 (75%), Gaps = 3/354 (0%) Query: 1 LASVELRGLVKRFGSFVAVDDVSLTIDHGQLVCLLGPSGCGKTTTLRLIAGFLEPSDGEI 60 + +EL+GL KR+GS V DVSL+++ GQLVCLLGPSGCGKTTTLRLIAGFL+P GEI Sbjct: 1 MGFLELKGLTKRYGSAAVVKDVSLSVEKGQLVCLLGPSGCGKTTTLRLIAGFLQPDGGEI 60 Query: 61 RVGDRVVSSKARTLPPEQRNMSMIFQSYALWPHMTVAENIVYGLRLRKMDRDTIAKKLAA 120 RVG R VSS + PE+RNMSMIFQSYALWPHMTV EN+ YGL+LR + +D A++ Sbjct: 61 RVGGRRVSSPGDSEAPERRNMSMIFQSYALWPHMTVMENVTYGLKLRGLSKDDTARRAET 120 Query: 121 ILATTKLEPLAQRYPGELSGGQQQRVALARALIVGPETLLLDEPLSNLDANLREEMRFEI 180 ILA TKL LAQRYPGELSGGQQQRV+LARAL+V PETLLLDEPLSNLDANLREEMRFEI Sbjct: 121 ILAATKLAQLAQRYPGELSGGQQQRVSLARALVVEPETLLLDEPLSNLDANLREEMRFEI 180 Query: 181 RRLHDEYRYTTVYVTHDQSEAMTTADLIAVMNAGKIDQLGSPEDIYARPESEFVARFIGA 240 RRLHD+YRYTTVYVTHDQ+EAMT ADLI VMN G I+Q GSPEDIY RP +EFVARFIG Sbjct: 181 RRLHDKYRYTTVYVTHDQAEAMTAADLIVVMNQGVIEQAGSPEDIYQRPRTEFVARFIGG 240 Query: 241 ANVIKGTARDANHVEFAGATLEVVGAALTA--GQSAPVAIRQHEIQLSTQAPIAQQNTLK 298 N+++G N V L G+ A G +A V++R H+++LS P + N ++ Sbjct: 241 TNILRGRWDGRNGVAGGNQLLLRCGSGEFAEDGDTA-VSVRHHDVRLSASRPAGETNVVQ 299 Query: 299 AIVTRQVYLGMNRDYMVETADGTSLRVTTPTETAVERGSEVWLTLPPARCRALS 352 VTRQ+YLG +RDY+V G +LR TP+ ++ G VWL LPP CRAL+ Sbjct: 300 GRVTRQIYLGSHRDYLVALPGGETLRAVTPSHVSIPPGDSVWLHLPPEHCRALA 353 >ref|NP_888614.1| ABC transporter ATP-binding protein [Bordetella bronchiseptica RB50] emb|CAE32567.1| ABC transport protein, ATP-binding component [Bordetella bronchiseptica RB50] Length = 354 Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 172/353 (48%), Positives = 236/353 (66%), Gaps = 4/353 (1%) Query: 1 LASVELRGLVKRFGSFVAVDDVSLTIDHGQLVCLLGPSGCGKTTTLRLIAGFLEPSDGEI 60 + ++ ++GL K +G+ + + L + G+L+ LLGPSGCGK+TTL+++AGF +P+DG+I Sbjct: 1 MKAIRIQGLTKHYGAHQVLRGIDLELAQGELLALLGPSGCGKSTTLQMLAGFDQPTDGQI 60 Query: 61 RVGDRVVSSKARTLPPEQRNMSMIFQSYALWPHMTVAENIVYGLRLRKMDRDTIAKKLAA 120 +GDR VS +PPE+RN+S++FQ+YA+WPHMTV EN+ YGL++RK+ R +A+++ Sbjct: 61 WIGDRQVSGAGVMVPPERRNISLVFQNYAVWPHMTVFENVAYGLQVRKVARTELAQRVKR 120 Query: 121 ILATTKLEPLAQRYPGELSGGQQQRVALARALIVGPETLLLDEPLSNLDANLREEMRFEI 180 L T +L LAQRYP ELSGGQQQRVALARAL+V P+ LLLDEPLSNLDA+LREEMR+EI Sbjct: 121 ALDTVRLTALAQRYPSELSGGQQQRVALARALVVEPDILLLDEPLSNLDAHLREEMRYEI 180 Query: 181 RRLHDEYRYTTVYVTHDQSEAMTTADLIAVMNAGKIDQLGSPEDIYARPESEFVARFIGA 240 R++HD TTVYVTHDQ EA+ TAD IAVM +G++ Q SP ++++RP + FVA FIG Sbjct: 181 RQVHDLLGLTTVYVTHDQGEALVTADKIAVMQSGQVQQFDSPVNVFSRPANAFVASFIGT 240 Query: 241 ANVIKGTARDANHVEFAGATLEVVG-AALTAGQSAPVAIRQHEIQLSTQAPIAQQNTLKA 299 N + G + + L + AG +A + IR ++L AP A NTL Sbjct: 241 NNELHGQLAEPGALRVGDRVLHGDDRSQAGAGGAACLCIRPSAVKLGA-APGA--NTLSG 297 Query: 300 IVTRQVYLGMNRDYMVETADGTSLRVTTPTETAVERGSEVWLTLPPARCRALS 352 VTR YLG RD VE A G +R + +E G V + LP C+ LS Sbjct: 298 TVTRVAYLGEYRDVQVELAAGQFVRAYVDPSSTLEPGQRVEVHLPIEHCQILS 350 >ref|NP_884851.1| ABC transport protein, ATP-binding component [Bordetella parapertussis 12822] emb|CAE37920.1| ABC transport protein, ATP-binding component [Bordetella parapertussis] Length = 354 Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 172/353 (48%), Positives = 235/353 (66%), Gaps = 4/353 (1%) Query: 1 LASVELRGLVKRFGSFVAVDDVSLTIDHGQLVCLLGPSGCGKTTTLRLIAGFLEPSDGEI 60 + ++ ++GL K +G+ + + L + G+L+ LLGPSGCGK+TTL+++AGF +P+DG+I Sbjct: 1 MKAIRIQGLTKHYGAHQVLRGIDLELAQGELLALLGPSGCGKSTTLQMLAGFDQPTDGQI 60 Query: 61 RVGDRVVSSKARTLPPEQRNMSMIFQSYALWPHMTVAENIVYGLRLRKMDRDTIAKKLAA 120 +GDR VS +PPE+RN+S++FQ+YA+WPHMTV EN+ YGL++RK+ R +A+++ Sbjct: 61 WIGDRQVSGAGVMVPPERRNISLVFQNYAVWPHMTVFENVAYGLQVRKVARTELAQRVKR 120 Query: 121 ILATTKLEPLAQRYPGELSGGQQQRVALARALIVGPETLLLDEPLSNLDANLREEMRFEI 180 L T +L LAQRYP ELSGGQQQRVALARAL+V P+ LLLDEPLSNLDA+LREEMR+EI Sbjct: 121 ALDTVRLTALAQRYPSELSGGQQQRVALARALVVEPDILLLDEPLSNLDAHLREEMRYEI 180 Query: 181 RRLHDEYRYTTVYVTHDQSEAMTTADLIAVMNAGKIDQLGSPEDIYARPESEFVARFIGA 240 R++HD TTVYVTHDQ EA+ TAD IAVM +G++ Q SP ++++RP + FVA FIG Sbjct: 181 RQVHDLLGLTTVYVTHDQGEALVTADKIAVMQSGQVQQFDSPVNVFSRPANTFVASFIGT 240 Query: 241 ANVIKGTARDANHVEFAGATLEVVG-AALTAGQSAPVAIRQHEIQLSTQAPIAQQNTLKA 299 N + G + + L AG +A + IR ++L AP A NTL Sbjct: 241 NNELHGQLAEPGALRVGDRVLHGDDRRQAGAGGAACLCIRPSAVKLGA-APGA--NTLSG 297 Query: 300 IVTRQVYLGMNRDYMVETADGTSLRVTTPTETAVERGSEVWLTLPPARCRALS 352 VTR YLG RD VE A G +R + +E G V + LP C+ LS Sbjct: 298 TVTRVAYLGEYRDVQVELAAGQFVRAYVDPSSTLEPGQRVEVHLPIEHCQILS 350 >ref|NP_881178.1| ABC transport protein, ATP-binding component [Bordetella pertussis Tohama I] emb|CAE42826.1| ABC transport protein, ATP-binding component [Bordetella pertussis Tohama I] gb|AEE67789.1| ABC transport protein, ATP-binding component [Bordetella pertussis CS] Length = 354 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 171/353 (48%), Positives = 236/353 (66%), Gaps = 4/353 (1%) Query: 1 LASVELRGLVKRFGSFVAVDDVSLTIDHGQLVCLLGPSGCGKTTTLRLIAGFLEPSDGEI 60 + ++ ++GL K +G+ + + L + G+L+ LLGPSGCGK+TTL+++AGF +P+DG+I Sbjct: 1 MKAIRIQGLTKHYGAHQVLRGIDLELAQGELLALLGPSGCGKSTTLQMLAGFDQPTDGQI 60 Query: 61 RVGDRVVSSKARTLPPEQRNMSMIFQSYALWPHMTVAENIVYGLRLRKMDRDTIAKKLAA 120 +GDR VS +PPE+RN+S++FQ+YA+WPHMTV EN+ YGL++RK+ R +A+++ Sbjct: 61 WIGDRQVSGAGVMVPPERRNISLVFQNYAVWPHMTVFENVAYGLQVRKVARTELAQRVKR 120 Query: 121 ILATTKLEPLAQRYPGELSGGQQQRVALARALIVGPETLLLDEPLSNLDANLREEMRFEI 180 L T +L LAQRYP ELSGGQQQRVALARAL+V P+ LLLDEPLSNLDA+LREEMR+EI Sbjct: 121 ALDTVRLTALAQRYPSELSGGQQQRVALARALVVEPDILLLDEPLSNLDAHLREEMRYEI 180 Query: 181 RRLHDEYRYTTVYVTHDQSEAMTTADLIAVMNAGKIDQLGSPEDIYARPESEFVARFIGA 240 R++HD TTVYVTHDQ +A+ TAD IAVM +G++ Q SP ++++RP + FVA FIG Sbjct: 181 RQVHDLLGLTTVYVTHDQGKALVTADKIAVMQSGQVQQFDSPVNVFSRPANTFVASFIGT 240 Query: 241 ANVIKGTARDANHVEFAGATLEVVG-AALTAGQSAPVAIRQHEIQLSTQAPIAQQNTLKA 299 N + G + + L + AG +A + IR ++L AP A NTL Sbjct: 241 NNELHGQLAEPGALRVGDRVLHGDDRSQAGAGGAACLCIRPSAVKLGA-APGA--NTLSG 297 Query: 300 IVTRQVYLGMNRDYMVETADGTSLRVTTPTETAVERGSEVWLTLPPARCRALS 352 VTR YLG RD VE A G +R + +E G V + LP C+ LS Sbjct: 298 TVTRVAYLGEYRDVQVELAAGQFVRAYVDPSSTLEPGQRVEVHLPIEHCQILS 350 >ref|YP_004154435.1| ABC transporter [Variovorax paradoxus EPS] gb|ADU36324.1| ABC transporter related protein [Variovorax paradoxus EPS] Length = 371 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 174/345 (50%), Positives = 228/345 (66%), Gaps = 5/345 (1%) Query: 4 VELRGLVKRFGSFVAVDDVSLTIDHGQLVCLLGPSGCGKTTTLRLIAGFLEPSDGEIRVG 63 + L+ + K +G+ V+D+SL + G+LV LLGPSGCGKTTTLR+IAGF+E + G I + Sbjct: 22 LHLKNIHKNYGTTAVVNDLSLELRQGELVTLLGPSGCGKTTTLRMIAGFIELTAGSIEMN 81 Query: 64 DRVVSSKARTLPPEQRNMSMIFQSYALWPHMTVAENIVYGLRLRKMDRDTIAKKLAAILA 123 + +S RT+PPE R MSMIFQSYA+WP+MTVAEN+ +GL +R+ +++ +L Sbjct: 82 GQQISGAGRTVPPEHRGMSMIFQSYAIWPNMTVAENVGFGLDVRRTPAAESKRRVGEMLE 141 Query: 124 TTKLEPLAQRYPGELSGGQQQRVALARALIVGPETLLLDEPLSNLDANLREEMRFEIRRL 183 L LA RYP ELSGGQQQRVALARA++V PE LLLDEPLSNLDANLREEM EIRRL Sbjct: 142 VVHLGHLAHRYPAELSGGQQQRVALARAMVVRPEVLLLDEPLSNLDANLREEMANEIRRL 201 Query: 184 HDEYRYTTVYVTHDQSEAMTTADLIAVMNAGKIDQLGSPEDIYARPESEFVARFIGAANV 243 HDE+R+TTVYVTHDQSEAMT +D IAV+N G+++Q+ +P ++Y RP + FVA FIG N+ Sbjct: 202 HDEFRFTTVYVTHDQSEAMTISDRIAVLNLGRLEQIDTPWNLYNRPHTPFVAGFIGRTNL 261 Query: 244 IKGTARDANHVEFAGATLEVV--GAALTAGQSAPVAIRQHEIQLSTQAPIAQQNTLKAIV 301 + T R A + G EV A A V+IR + L T A A+V Sbjct: 262 VSATLR-AGCITLDGLHGEVPIQDEAARDRADARVSIRPQSLYLGTDVLGALPMGRVAVV 320 Query: 302 TRQVYLGMNRDYMVET-ADGTSLRVTTPTETAVERGSEVWLTLPP 345 +R YLG DY+V G +L+V P + +E G E L++ P Sbjct: 321 SR-TYLGEYWDYVVRPLGGGDTLKVHAPPSSVLEIGHESALSVDP 364