BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0216.0003.p (398 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001236731.1| putative aminotransferase, class V [Bradyrhi... 660 0.0 ref|NP_767013.1| aminotransferase [Bradyrhizobium japonicum USDA... 659 0.0 ref|YP_001208786.1| putative aminotransferase, class V Serine--g... 654 0.0 ref|YP_567919.1| Serine--glyoxylate transaminase [Rhodopseudomon... 620 e-175 ref|YP_488223.1| Serine--glyoxylate transaminase [Rhodopseudomon... 607 e-172 >ref|YP_001236731.1| putative aminotransferase, class V [Bradyrhizobium sp. BTAi1] gb|ABQ32825.1| Putative Aminotransferase, class V [Bradyrhizobium sp. BTAi1] Length = 395 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/399 (79%), Positives = 357/399 (89%), Gaps = 5/399 (1%) Query: 1 MTVRAGREFLAIPGPTTMPDQVLQAMHRPALDIYSNEMVELTDSLLRDLSRLFATQGKSY 60 MTVRAGREFLAIPGPTTMPD+VLQAMHRPALDIYS +MVELTD L+ DL RLFAT+GK+Y Sbjct: 1 MTVRAGREFLAIPGPTTMPDEVLQAMHRPALDIYSKQMVELTDGLMADLGRLFATKGKTY 60 Query: 61 IYISNGHGAWEATWEATVSDVLWRGDKVLLLETGRLAIGWGQAAXAMGAEVEVLKGDWRR 120 IYI+NGHGAWEA +S+VL RGDK+L+LE+GR AIGWGQAA AMGAE+EVL+GDWRR Sbjct: 61 IYIANGHGAWEAV----LSNVLSRGDKLLVLESGRFAIGWGQAARAMGAEIEVLRGDWRR 116 Query: 121 AIRPAEVEERLRRDKEHTIKAILVVQVDTASGAYNDIEAIGKAIKAAGHPALYMVDTVAS 180 A+RPAEVE RLR D+EHTIKAI+V Q+DTASG ND+EAIG+AIKA+GHPALYMVDTVAS Sbjct: 117 AVRPAEVEARLRADREHTIKAIVVAQIDTASGVVNDVEAIGRAIKASGHPALYMVDTVAS 176 Query: 181 LGCMPFEMDKWYVDVAMSGSQKGLMTPPGLGFVAANDRAWDAHKKADLRTPYWDWTEREG 240 LGCMPFEMD W +DVAMSGSQKGLMTPPGLGFVAAN RA + HK+A++RTPYWDW+EREG Sbjct: 177 LGCMPFEMDAWGIDVAMSGSQKGLMTPPGLGFVAANARALEVHKRANMRTPYWDWSEREG 236 Query: 241 SEHYRKYAGTAPVHLLFALREAINMLHAEGLENAFERHRLLGEAVRRAVAVWGEGQVLGF 300 +EHYRKY GTAPVHLLFALR+AI+ML AEGL +AF RH+LLGEAVRRAVA WGEGQV+GF Sbjct: 237 AEHYRKYGGTAPVHLLFALRQAIDMLFAEGLPHAFRRHQLLGEAVRRAVAKWGEGQVIGF 296 Query: 301 NIAEPAERSNTVTTVTVKGA-DPAAIQRYAKEKCGVVLGTGIGDLQGQAFRIAHMGHVNA 359 NIA+ AERSNTVTTV V G DPA +Q Y KE+CGVVLGTGIGDL G+AFRIAHMGHVNA Sbjct: 297 NIADAAERSNTVTTVLVGGGYDPAVLQSYCKEQCGVVLGTGIGDLSGKAFRIAHMGHVNA 356 Query: 360 PMILGTLAVVEVALTALNIPHGKAGADAAIQWLGENVKA 398 PM+LGTL V+E+AL AL IPHG+ G DAAIQWLGE+V A Sbjct: 357 PMVLGTLGVIEMALVALKIPHGRGGLDAAIQWLGESVSA 395 >ref|NP_767013.1| aminotransferase [Bradyrhizobium japonicum USDA 110] dbj|BAC45638.1| hypothetical aminotransferase [Bradyrhizobium japonicum USDA 110] Length = 395 Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/399 (79%), Positives = 355/399 (88%), Gaps = 5/399 (1%) Query: 1 MTVRAGREFLAIPGPTTMPDQVLQAMHRPALDIYSNEMVELTDSLLRDLSRLFATQGKSY 60 MTVRAGREFLAIPGPTTMPD+VL+AMHRPA+DIYS EM++LT+SLL D+S+LFAT+GKSY Sbjct: 1 MTVRAGREFLAIPGPTTMPDEVLRAMHRPAIDIYSKEMLDLTESLLSDISKLFATRGKSY 60 Query: 61 IYISNGHGAWEATWEATVSDVLWRGDKVLLLETGRLAIGWGQAAXAMGAEVEVLKGDWRR 120 IYI+NGHGAWEA +S+VL RGDKVL+LE+GR AIGWG AA MGAEVEVLKGDWRR Sbjct: 61 IYIANGHGAWEAA----LSNVLSRGDKVLVLESGRFAIGWGNAAALMGAEVEVLKGDWRR 116 Query: 121 AIRPAEVEERLRRDKEHTIKAILVVQVDTASGAYNDIEAIGKAIKAAGHPALYMVDTVAS 180 A+RP EVEERLRRDKEH IKA++VVQVDTASG NDIEAIGKAIKA+GHPALYMVDTVAS Sbjct: 117 AVRPHEVEERLRRDKEHRIKAVVVVQVDTASGVQNDIEAIGKAIKASGHPALYMVDTVAS 176 Query: 181 LGCMPFEMDKWYVDVAMSGSQKGLMTPPGLGFVAANDRAWDAHKKADLRTPYWDWTEREG 240 LGCMPFEMDKW VDVAMSGSQKGLMTPPGLGFV+AN RA + HKKA++ TPYW W+EREG Sbjct: 177 LGCMPFEMDKWGVDVAMSGSQKGLMTPPGLGFVSANARALEVHKKANMSTPYWSWSEREG 236 Query: 241 SEHYRKYAGTAPVHLLFALREAINMLHAEGLENAFERHRLLGEAVRRAVAVWGEGQVLGF 300 +E+YRKYAGTAPVHLLFALR+AI++LH EGLENAF RH LLGEA RRAV+ W EGQVLGF Sbjct: 237 TENYRKYAGTAPVHLLFALRKAIDLLHEEGLENAFRRHSLLGEAARRAVSAWTEGQVLGF 296 Query: 301 NIAEPAERSNTVTTVTV-KGADPAAIQRYAKEKCGVVLGTGIGDLQGQAFRIAHMGHVNA 359 NIAE +ERSNTVTTVT+ G DPA +QRY K+KCGVVLGTGIGDL GQAFRIAHMGH+NA Sbjct: 297 NIAEASERSNTVTTVTMSNGHDPAVLQRYCKDKCGVVLGTGIGDLSGQAFRIAHMGHINA 356 Query: 360 PMILGTLAVVEVALTALNIPHGKAGADAAIQWLGENVKA 398 PM+LGTL VVE+ L AL IPHGK G +AA+ +LGE V A Sbjct: 357 PMLLGTLGVVEIGLNALKIPHGKGGLEAAVAYLGEEVAA 395 >ref|YP_001208786.1| putative aminotransferase, class V Serine--glyoxylate aminotransferase [Bradyrhizobium sp. ORS 278] emb|CAL80571.1| Putative Aminotransferase, class V; putative Serine--glyoxylate aminotransferase [Bradyrhizobium sp. ORS 278] Length = 395 Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/399 (78%), Positives = 355/399 (88%), Gaps = 5/399 (1%) Query: 1 MTVRAGREFLAIPGPTTMPDQVLQAMHRPALDIYSNEMVELTDSLLRDLSRLFATQGKSY 60 MTVRAGREFLAIPGPTTMPD+VLQAMHRPALDIYS +MVELTD +L DL RLFAT+GK+Y Sbjct: 1 MTVRAGREFLAIPGPTTMPDEVLQAMHRPALDIYSRQMVELTDGILSDLGRLFATKGKTY 60 Query: 61 IYISNGHGAWEATWEATVSDVLWRGDKVLLLETGRLAIGWGQAAXAMGAEVEVLKGDWRR 120 IYI+NGHGAWEA +S+VL RGDKVL+LE+GR A+GWG AA AMGAEVEVL+GDWRR Sbjct: 61 IYIANGHGAWEAV----LSNVLSRGDKVLVLESGRFAVGWGHAAKAMGAEVEVLRGDWRR 116 Query: 121 AIRPAEVEERLRRDKEHTIKAILVVQVDTASGAYNDIEAIGKAIKAAGHPALYMVDTVAS 180 A+RPAEVE RLR DKEHTIKAI+V Q+DTASG ND+EAIG+AI+A+GHPALYMVDTVAS Sbjct: 117 AVRPAEVEARLRADKEHTIKAIVVAQIDTASGVVNDVEAIGRAIRASGHPALYMVDTVAS 176 Query: 181 LGCMPFEMDKWYVDVAMSGSQKGLMTPPGLGFVAANDRAWDAHKKADLRTPYWDWTEREG 240 LGCMPFEMD W++DVAMSGSQKGLMTPPGLGFVAAN RA + HK+A++RTPYWDW+EREG Sbjct: 177 LGCMPFEMDAWHIDVAMSGSQKGLMTPPGLGFVAANARALEVHKRANMRTPYWDWSEREG 236 Query: 241 SEHYRKYAGTAPVHLLFALREAINMLHAEGLENAFERHRLLGEAVRRAVAVWGEGQVLGF 300 +EHYRKY GTAPVHLLFALR+A++ML AEGL +AF RH+LLGEAVRRAVA W EGQV+GF Sbjct: 237 TEHYRKYGGTAPVHLLFALRQAMDMLFAEGLPHAFRRHQLLGEAVRRAVAKWSEGQVIGF 296 Query: 301 NIAEPAERSNTVTTVTV-KGADPAAIQRYAKEKCGVVLGTGIGDLQGQAFRIAHMGHVNA 359 NI + ERSNTVTTV V +G DPA +Q Y KE+CGVVLGTGIGDL G+AFRIAHMGHVNA Sbjct: 297 NIEDATERSNTVTTVLVGEGYDPAVLQAYCKEQCGVVLGTGIGDLSGKAFRIAHMGHVNA 356 Query: 360 PMILGTLAVVEVALTALNIPHGKAGADAAIQWLGENVKA 398 PM+LGTL V+E+AL AL IPHG+ G DAAIQWLGE+V A Sbjct: 357 PMVLGTLGVIEMALVALKIPHGRGGLDAAIQWLGESVTA 395 >ref|YP_567919.1| Serine--glyoxylate transaminase [Rhodopseudomonas palustris BisB5] gb|ABE38018.1| Serine--glyoxylate transaminase [Rhodopseudomonas palustris BisB5] Length = 395 Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust. Identities = 299/399 (74%), Positives = 342/399 (85%), Gaps = 5/399 (1%) Query: 1 MTVRAGREFLAIPGPTTMPDQVLQAMHRPALDIYSNEMVELTDSLLRDLSRLFATQGKSY 60 M V AGREFLAIPGPTTMPD+VLQAMHRPALDIYS MVEL++SLLRDLSRLFAT+GKSY Sbjct: 1 MAVSAGREFLAIPGPTTMPDEVLQAMHRPALDIYSQAMVELSESLLRDLSRLFATRGKSY 60 Query: 61 IYISNGHGAWEATWEATVSDVLWRGDKVLLLETGRLAIGWGQAAXAMGAEVEVLKGDWRR 120 IYI+NGHGAWEA +S+VL RGDKVL+LE+GR A+GWG AA AMG EVEVLKG WR Sbjct: 61 IYIANGHGAWEAV----ISNVLSRGDKVLVLESGRFALGWGAAAQAMGCEVEVLKGGWRH 116 Query: 121 AIRPAEVEERLRRDKEHTIKAILVVQVDTASGAYNDIEAIGKAIKAAGHPALYMVDTVAS 180 A+RP+EVEERLRRDKEH+IKAI+VVQVDTAS AYND+EAIG AIKAAGHPAL+MVD VAS Sbjct: 117 AVRPSEVEERLRRDKEHSIKAIVVVQVDTASSAYNDLEAIGHAIKAAGHPALFMVDAVAS 176 Query: 181 LGCMPFEMDKWYVDVAMSGSQKGLMTPPGLGFVAANDRAWDAHKKADLRTPYWDWTEREG 240 LGCMPFEMD W +DVAMSGSQKGLM+PPGLGFVA DRA AH+ A LRTPYWDWT+R+G Sbjct: 177 LGCMPFEMDAWGIDVAMSGSQKGLMSPPGLGFVAVGDRARAAHQSAGLRTPYWDWTQRDG 236 Query: 241 SEHYRKYAGTAPVHLLFALREAINMLHAEGLENAFERHRLLGEAVRRAVAVWGEGQVLGF 300 EHY+KYAGTAPVHLLFALR+A++ML AEGL+NAF RHRLL EAVRRA+AVW EG+V F Sbjct: 237 PEHYQKYAGTAPVHLLFALRKALDMLFAEGLDNAFTRHRLLAEAVRRAIAVWSEGRVFSF 296 Query: 301 NIAEPAERSNTVTTV-TVKGADPAAIQRYAKEKCGVVLGTGIGDLQGQAFRIAHMGHVNA 359 NI + ER++TVTTV G D A+ RY K+KCG+V+G GIG+LQ +AFRIAHMGH+NA Sbjct: 297 NIEDAHERADTVTTVRAADGHDLQALHRYCKDKCGLVIGVGIGELQDRAFRIAHMGHINA 356 Query: 360 PMILGTLAVVEVALTALNIPHGKAGADAAIQWLGENVKA 398 PMILGTL V+E+A+ ALNIPH K G AAI +L E+V A Sbjct: 357 PMILGTLGVIEMAMAALNIPHNKGGVGAAIDYLAESVPA 395 >ref|YP_488223.1| Serine--glyoxylate transaminase [Rhodopseudomonas palustris HaA2] gb|ABD09312.1| Serine--glyoxylate transaminase [Rhodopseudomonas palustris HaA2] Length = 395 Score = 607 bits (1566), Expect = e-172, Method: Compositional matrix adjust. Identities = 305/399 (76%), Positives = 344/399 (86%), Gaps = 5/399 (1%) Query: 1 MTVRAGREFLAIPGPTTMPDQVLQAMHRPALDIYSNEMVELTDSLLRDLSRLFATQGKSY 60 M V AGREFLAIPGPT MPD+VLQAMHRPALDIYS +MVEL+DSLL DLSRLFAT+GKSY Sbjct: 1 MAVSAGREFLAIPGPTNMPDEVLQAMHRPALDIYSRQMVELSDSLLSDLSRLFATKGKSY 60 Query: 61 IYISNGHGAWEATWEATVSDVLWRGDKVLLLETGRLAIGWGQAAXAMGAEVEVLKGDWRR 120 IYI+NGHGAWEA +S+VL RGDKVL+LE+GR A+GWG AA AMG EVEVLKGDWRR Sbjct: 61 IYIANGHGAWEAV----ISNVLSRGDKVLVLESGRFALGWGNAAQAMGCEVEVLKGDWRR 116 Query: 121 AIRPAEVEERLRRDKEHTIKAILVVQVDTASGAYNDIEAIGKAIKAAGHPALYMVDTVAS 180 A+RP EVEERLRRDK+H+IKAI+VVQVDTAS AYNDIEAIG+AIKAAGHPAL+MVD VAS Sbjct: 117 AVRPDEVEERLRRDKDHSIKAIMVVQVDTASSAYNDIEAIGRAIKAAGHPALFMVDAVAS 176 Query: 181 LGCMPFEMDKWYVDVAMSGSQKGLMTPPGLGFVAANDRAWDAHKKADLRTPYWDWTEREG 240 LGCMPF MDKW +DVAMSGSQKGLM+PPGLGFVA DRA AH+ A LRTPYWDWT+R+G Sbjct: 177 LGCMPFAMDKWGIDVAMSGSQKGLMSPPGLGFVAVGDRARAAHQTAGLRTPYWDWTQRDG 236 Query: 241 SEHYRKYAGTAPVHLLFALREAINMLHAEGLENAFERHRLLGEAVRRAVAVWGEGQVLGF 300 EHY+KYAGTAPVHLLFALR+A++ML EGL+N F RHRLL EAVRRAVAVW EGQV F Sbjct: 237 PEHYQKYAGTAPVHLLFALRKALDMLFEEGLDNTFTRHRLLAEAVRRAVAVWSEGQVFSF 296 Query: 301 NIAEPAERSNTVTTV-TVKGADPAAIQRYAKEKCGVVLGTGIGDLQGQAFRIAHMGHVNA 359 NIA+ AER++TVTTV +G D A+ RY K+KCGVVLG GIG+LQ +AFRIAHMGHVNA Sbjct: 297 NIADAAERADTVTTVRAAEGHDLFALHRYCKDKCGVVLGVGIGELQNRAFRIAHMGHVNA 356 Query: 360 PMILGTLAVVEVALTALNIPHGKAGADAAIQWLGENVKA 398 PM+LGTL VVE+AL AL+IPH K G AAI +L E+V A Sbjct: 357 PMLLGTLGVVEMALAALDIPHRKGGVAAAIGYLAESVPA 395