BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0216.0002.p (277 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_946143.1| hypothetical protein RPA0790 [Rhodopseudomonas ... 380 e-103 ref|YP_001989891.1| hypothetical protein Rpal_0858 [Rhodopseudom... 380 e-103 ref|YP_004107311.1| hypothetical protein Rpdx1_0950 [Rhodopseudo... 379 e-103 ref|ZP_08628469.1| hypothetical protein CSIRO_1545 [Bradyrhizobi... 357 9e-97 ref|YP_567920.1| hypothetical protein RPD_0781 [Rhodopseudomonas... 356 2e-96 >ref|NP_946143.1| hypothetical protein RPA0790 [Rhodopseudomonas palustris CGA009] emb|CAE26234.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 284 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 177/253 (69%), Positives = 204/253 (80%) Query: 23 LLLFVLAIYLIAAYLLLPALWTHYEHQKGLANLPMVTRTAQGIPGDPMNVGLIGDKRDVV 82 L + ++ Y I AYL LP WTHYEHQ LA++PMVTRTAQGIPGDP+NVGLIGD+ ++V Sbjct: 25 LSVVLIGCYAILAYLALPLFWTHYEHQSKLADMPMVTRTAQGIPGDPINVGLIGDQNEIV 84 Query: 83 CAMHEAGWFPADPVTLKSSIEIVGSVLLDRPYKDAPVSNLFYLDRREDLAFERPVGSSAD 142 CA+ A W PADP+TL+SSI I GSVLLDRPY DAPVS+L+YLDRREDLAFE+P G SAD Sbjct: 85 CAILAANWHPADPITLRSSIAIAGSVLLDRPYPDAPVSSLYYLDRREDLAFEKPDGHSAD 144 Query: 143 RRNHVRFWKVLDQGEEKRPVWLGAATLDRSVGVSHYTGAVTHHIAADLDAERALLATDLE 202 RRNHVR WKVLD G+E RPVWLG+AT DR VGVSHYTGAVTHHIA D+DAER A DLE Sbjct: 145 RRNHVRLWKVLDSGQEGRPVWLGSATFDRGVGVSHYTGAVTHHIAPDIDAERDQFAADLE 204 Query: 203 SAGMVTAKYQVTGIGPTFNGRNGGGDPYYTDGEIWVLRLVEACRKNNGTVEQLPSPAATE 262 +A MV AKYQ+TG+GPT GRNG GD YYTDGE+W+LRL E C+K + E LPSP ATE Sbjct: 205 AAAMVDAKYQITGVGPTIAGRNGEGDLYYTDGEVWILRLTEGCKKRSSPAEILPSPLATE 264 Query: 263 FKDQVWRAVVEAI 275 KDQ++R V AI Sbjct: 265 IKDQIFRTVTNAI 277 >ref|YP_001989891.1| hypothetical protein Rpal_0858 [Rhodopseudomonas palustris TIE-1] gb|ACE99415.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 284 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 177/253 (69%), Positives = 204/253 (80%) Query: 23 LLLFVLAIYLIAAYLLLPALWTHYEHQKGLANLPMVTRTAQGIPGDPMNVGLIGDKRDVV 82 L + ++ Y I AYL LP WTHYEHQ LA++PMVTRTAQGIPGDP+NVGLIGD+ ++V Sbjct: 25 LSVVLIGCYAILAYLALPLFWTHYEHQSKLADMPMVTRTAQGIPGDPINVGLIGDQHEIV 84 Query: 83 CAMHEAGWFPADPVTLKSSIEIVGSVLLDRPYKDAPVSNLFYLDRREDLAFERPVGSSAD 142 CA+ A W PADP+TL+SSI I GSVLLDRPY DAPVS+L+YLDRREDLAFE+P G SAD Sbjct: 85 CAILAANWHPADPITLRSSIAIAGSVLLDRPYPDAPVSSLYYLDRREDLAFEKPDGRSAD 144 Query: 143 RRNHVRFWKVLDQGEEKRPVWLGAATLDRSVGVSHYTGAVTHHIAADLDAERALLATDLE 202 RRNHVR WKVLD G+E RPVWLG+AT DR VGVSHYTGAVTHHIA D+DAER A DLE Sbjct: 145 RRNHVRLWKVLDSGQEGRPVWLGSATFDRGVGVSHYTGAVTHHIAPDIDAERDQFAADLE 204 Query: 203 SAGMVTAKYQVTGIGPTFNGRNGGGDPYYTDGEIWVLRLVEACRKNNGTVEQLPSPAATE 262 +A MV AKYQ+TG+GPT GRNG GD YYTDGE+W+LRL E C+K + E LPSP ATE Sbjct: 205 AAAMVDAKYQITGVGPTIAGRNGEGDLYYTDGEVWILRLTEGCKKRSSPAEILPSPLATE 264 Query: 263 FKDQVWRAVVEAI 275 KDQ++R V AI Sbjct: 265 IKDQIFRTVTNAI 277 >ref|YP_004107311.1| hypothetical protein Rpdx1_0950 [Rhodopseudomonas palustris DX-1] gb|ADU42578.1| hypothetical protein Rpdx1_0950 [Rhodopseudomonas palustris DX-1] Length = 284 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 177/251 (70%), Positives = 203/251 (80%) Query: 25 LFVLAIYLIAAYLLLPALWTHYEHQKGLANLPMVTRTAQGIPGDPMNVGLIGDKRDVVCA 84 + ++ Y I AY+ LP WTHYEHQ+ LA+LPMVTRTAQGIPGDP+NVGLIGD+ +VVCA Sbjct: 27 VVLIGCYAILAYMALPLFWTHYEHQRRLADLPMVTRTAQGIPGDPINVGLIGDQHEVVCA 86 Query: 85 MHEAGWFPADPVTLKSSIEIVGSVLLDRPYKDAPVSNLFYLDRREDLAFERPVGSSADRR 144 + A W PADP+TL+SSI I GSVLLDRPY DAPVS+L+YLDRREDLAFE+P G SADRR Sbjct: 87 ILAANWHPADPITLRSSIAIAGSVLLDRPYPDAPVSSLYYLDRREDLAFEKPDGRSADRR 146 Query: 145 NHVRFWKVLDQGEEKRPVWLGAATLDRSVGVSHYTGAVTHHIAADLDAERALLATDLESA 204 NHVR WKVLD G+E RPVWLG+AT DR VGVSHYTGAVTHHIA D+DAER A DLE+A Sbjct: 147 NHVRLWKVLDSGQEGRPVWLGSATFDRGVGVSHYTGAVTHHIAPDIDAERDQFAADLEAA 206 Query: 205 GMVTAKYQVTGIGPTFNGRNGGGDPYYTDGEIWVLRLVEACRKNNGTVEQLPSPAATEFK 264 MV AKYQ+TG+GPT GRNG GD YYTDGE+W+LRL E C+K E LPSP ATE K Sbjct: 207 AMVDAKYQITGVGPTIAGRNGEGDLYYTDGEVWILRLAEGCKKRGSPAEILPSPLATEIK 266 Query: 265 DQVWRAVVEAI 275 DQ++R V AI Sbjct: 267 DQIFRTVTSAI 277 >ref|ZP_08628469.1| hypothetical protein CSIRO_1545 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08793.1| hypothetical protein CSIRO_1545 [Bradyrhizobiaceae bacterium SG-6C] Length = 264 Score = 357 bits (917), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 165/255 (64%), Positives = 198/255 (77%) Query: 17 LRQAQILLLFVLAIYLIAAYLLLPALWTHYEHQKGLANLPMVTRTAQGIPGDPMNVGLIG 76 +++ I+L F L +Y AY+LLP+ W HYEHQK L LPMVT TAQGIP DP+NVGL+G Sbjct: 1 MKRTLIVLGFFLVVYGAIAYILLPSFWRHYEHQKKLDGLPMVTVTAQGIPADPINVGLVG 60 Query: 77 DKRDVVCAMHEAGWFPADPVTLKSSIEIVGSVLLDRPYKDAPVSNLFYLDRREDLAFERP 136 DV+CAM EAGW PADP+TL+SS+EI GSVLLDRPY APVS L+Y RRE+ AFE+P Sbjct: 61 SSSDVLCAMREAGWTPADPITLRSSLEISGSVLLDRPYPRAPVSPLYYDGRREEFAFEKP 120 Query: 137 VGSSADRRNHVRFWKVLDQGEEKRPVWLGAATLDRSVGVSHYTGAVTHHIAADLDAERAL 196 VG SAD+R+H+R W VL GEEKRPVWLGAAT DR VG SHYTGAVTHHIA D+DAER L Sbjct: 121 VGKSADQRHHIRLWMVLKDGEEKRPVWLGAATFDRGVGFSHYTGAVTHHIAPDVDAERQL 180 Query: 197 LATDLESAGMVTAKYQVTGIGPTFNGRNGGGDPYYTDGEIWVLRLVEACRKNNGTVEQLP 256 + TDL++AGM+ A+Y V G+GPT NGRNG GD YYTDGE+W++RLVE C + N L Sbjct: 181 IETDLQAAGMIEARYTVAGVGPTLNGRNGEGDFYYTDGEVWMMRLVEGCARRNKPPVVLS 240 Query: 257 SPAATEFKDQVWRAV 271 PAA E KD +W++V Sbjct: 241 GPAANELKDAIWKSV 255 >ref|YP_567920.1| hypothetical protein RPD_0781 [Rhodopseudomonas palustris BisB5] gb|ABE38019.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 282 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 167/234 (71%), Positives = 192/234 (82%) Query: 42 LWTHYEHQKGLANLPMVTRTAQGIPGDPMNVGLIGDKRDVVCAMHEAGWFPADPVTLKSS 101 WTHYEHQ+GLA++PM TRTAQGIPGDP+NVGLIG+++DVVCAM A W PADP+TL SS Sbjct: 43 FWTHYEHQRGLADMPMATRTAQGIPGDPINVGLIGNQKDVVCAMLAANWTPADPLTLSSS 102 Query: 102 IEIVGSVLLDRPYKDAPVSNLFYLDRREDLAFERPVGSSADRRNHVRFWKVLDQGEEKRP 161 IEI GSVLLDR Y APVSNL+YL RREDLAFE+P G SADRR+HVR WKVLD G+E RP Sbjct: 103 IEIAGSVLLDRAYHHAPVSNLYYLGRREDLAFEKPDGRSADRRHHVRLWKVLDSGDEGRP 162 Query: 162 VWLGAATLDRSVGVSHYTGAVTHHIAADLDAERALLATDLESAGMVTAKYQVTGIGPTFN 221 VWLG AT DR VGVS YTGAVTHHI D+DAER LLA+DLE+A MV AKYQVTGIGPT Sbjct: 163 VWLGDATFDRGVGVSKYTGAVTHHIDPDIDAERGLLASDLEAAAMVDAKYQVTGIGPTIA 222 Query: 222 GRNGGGDPYYTDGEIWVLRLVEACRKNNGTVEQLPSPAATEFKDQVWRAVVEAI 275 G NG GD YYTDGE+W+LRLV+ C+K + LPSP ATE KD+++R V +A+ Sbjct: 223 GHNGEGDRYYTDGEVWILRLVDGCKKRSSPAAVLPSPLATEIKDRIFRTVTDAV 276