BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0215.0011.p (169 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001961120.1| rcorf145 [Agrobacterium rhizogenes] >gi|1583... 256 1e-66 emb|CAD31628.1| PUTATIVE INTEGRASE/RECOMBINASE PROTEIN [Mesorhiz... 248 2e-64 ref|YP_770814.1| putative integrase/recombinase [Rhizobium legum... 199 8e-50 ref|NP_106607.1| integrase/recombinase [Mesorhizobium loti MAFF3... 198 2e-49 ref|YP_821920.1| phage integrase family protein [Candidatus Soli... 192 1e-47 >ref|YP_001961120.1| rcorf145 [Agrobacterium rhizogenes] gb|ABW33702.1| rcorf145 [Agrobacterium rhizogenes] Length = 413 Score = 256 bits (653), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 121/169 (71%), Positives = 146/169 (86%) Query: 1 MGRRDYAILLLLAKLGLRADEVATLTVDDIDWRASEILVRAKGRQCARMPIPPDIGAAIV 60 MG RDYA+L++LAKLGLRA EVATL +DDIDW++ ILV KGR+ A MP+ D+G AIV Sbjct: 245 MGHRDYAVLMILAKLGLRASEVATLNLDDIDWQSGTILVHGKGRRQATMPLRHDVGTAIV 304 Query: 61 VYLRNGRPKSSCRRLFVRTLAPHVGFASGCAISMIAKAALDRVGIEGCAHRGAHIFRHSL 120 Y+R+GRP S+CRR+F+RTLAPHVGFASGCAI+MIAK AL+R GI+G AH GAH+FRHSL Sbjct: 305 AYIRHGRPASACRRVFLRTLAPHVGFASGCAITMIAKQALERAGIDGYAHHGAHLFRHSL 364 Query: 121 ATELLRSGATLSEIGQLLRHENHDTTRIYAKVDIDALRTLSLPWPGGVQ 169 AT+LLRSGA+ +EIGQLLRH + D+TRIYAK+D+D LR LSLPWPGGVQ Sbjct: 365 ATDLLRSGASFAEIGQLLRHRSIDSTRIYAKLDVDKLRGLSLPWPGGVQ 413 >emb|CAD31628.1| PUTATIVE INTEGRASE/RECOMBINASE PROTEIN [Mesorhizobium loti R7A] Length = 413 Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 119/169 (70%), Positives = 142/169 (84%) Query: 1 MGRRDYAILLLLAKLGLRADEVATLTVDDIDWRASEILVRAKGRQCARMPIPPDIGAAIV 60 MG RDYA+L+ LAKLGLRA EVA L++DDIDW+ +L+ KGR+ A MP+ D+GAAIV Sbjct: 245 MGLRDYAVLMALAKLGLRAGEVAALSLDDIDWQLGSVLIHGKGRRQAMMPLRHDVGAAIV 304 Query: 61 VYLRNGRPKSSCRRLFVRTLAPHVGFASGCAISMIAKAALDRVGIEGCAHRGAHIFRHSL 120 Y+R+GRP S CRRLF+R LAPHVGFASGCAI+MIAK AL+R GI G AH GAH+FRHSL Sbjct: 305 AYIRHGRPASPCRRLFLRMLAPHVGFASGCAITMIAKEALERAGIHGYAHHGAHLFRHSL 364 Query: 121 ATELLRSGATLSEIGQLLRHENHDTTRIYAKVDIDALRTLSLPWPGGVQ 169 AT+LLRSGA+ +EIGQLLRH + D+TRIYAK+DI+ LR LSLPWPGGVQ Sbjct: 365 ATDLLRSGASFAEIGQLLRHRSIDSTRIYAKLDIEKLRELSLPWPGGVQ 413 >ref|YP_770814.1| putative integrase/recombinase [Rhizobium leguminosarum bv. viciae 3841] emb|CAK11608.1| putative integrase/recombinase [Rhizobium leguminosarum bv. viciae 3841] Length = 398 Score = 199 bits (507), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 95/140 (67%), Positives = 117/140 (83%) Query: 1 MGRRDYAILLLLAKLGLRADEVATLTVDDIDWRASEILVRAKGRQCARMPIPPDIGAAIV 60 MGRRDYA+L++LAKLGLRA EV+ L +DDIDW++ ILV KGR+ A MP+ D+G A+V Sbjct: 245 MGRRDYAVLMILAKLGLRASEVSNLNLDDIDWQSGTILVHGKGRRQATMPLRHDVGTALV 304 Query: 61 VYLRNGRPKSSCRRLFVRTLAPHVGFASGCAISMIAKAALDRVGIEGCAHRGAHIFRHSL 120 Y+R+GRP S+CRRLF+RTLAPHVGF SG AI+ IAK AL++ IEG AH GAH+FRHSL Sbjct: 305 AYIRHGRPASACRRLFLRTLAPHVGFTSGSAITWIAKQALEQADIEGYAHHGAHLFRHSL 364 Query: 121 ATELLRSGATLSEIGQLLRH 140 AT+LLRSGA+ +EIGQLLRH Sbjct: 365 ATDLLRSGASFAEIGQLLRH 384 >ref|NP_106607.1| integrase/recombinase [Mesorhizobium loti MAFF303099] ref|NP_106531.1| integrase/recombinase [Mesorhizobium loti MAFF303099] dbj|BAB52317.1| integrase/recombinase [Mesorhizobium loti MAFF303099] dbj|BAB52393.1| integrase/recombinase [Mesorhizobium loti MAFF303099] Length = 407 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 99/165 (60%), Positives = 124/165 (75%), Gaps = 1/165 (0%) Query: 2 GRRDYAILLLLAKLGLRADEVATLTVDDIDWRASEILVRAKGRQCARMPIPPDIGAAIVV 61 GRRDYA+L+LLA+LGLR EV+ LT+DD+DW EI+V KG++ AR+P+P D+GAA+V Sbjct: 241 GRRDYAVLMLLARLGLRGGEVSALTLDDLDWDCGEIVVHGKGQRLARLPLPADVGAALVD 300 Query: 62 YLRNGRPKSSCRRLFVRTLAPHVGFASGCAISMIAKAALDRVGIEGCAHRGAHIFRHSLA 121 YLR RP S RR+F+RT AP GF S I I + AL R G+ A +GAH+ RHSLA Sbjct: 301 YLRQDRPACSTRRVFIRTRAPRRGFVSQSTICCIVRRALKRAGLT-PAFKGAHLLRHSLA 359 Query: 122 TELLRSGATLSEIGQLLRHENHDTTRIYAKVDIDALRTLSLPWPG 166 T+LLR GA+L EIGQLLRH +TT+IYAKVDI ALR ++LPWPG Sbjct: 360 TDLLRRGASLVEIGQLLRHSQPNTTQIYAKVDIAALRAIALPWPG 404 >ref|YP_821920.1| phage integrase family protein [Candidatus Solibacter usitatus Ellin6076] gb|ABJ81635.1| phage integrase family protein [Candidatus Solibacter usitatus Ellin6076] Length = 412 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 92/167 (55%), Positives = 125/167 (74%), Gaps = 1/167 (0%) Query: 1 MGRRDYAILLLLAKLGLRADEVATLTVDDIDWRASEILVRAKGRQCARMPIPPDIGAAIV 60 +GRR++ ILLLLA+LG+RA EV L++DDIDW +I +R KG + A++P+ D+G+A+ Sbjct: 245 VGRRNHTILLLLARLGVRAGEVVGLSLDDIDWSTGQITIRGKGGKSAQLPLVNDVGSALA 304 Query: 61 VYLRNGRPKSSCRRLFVRTLAPHVGFASGCAISMIAKAALDRVGIEGCAHRGAHIFRHSL 120 YLR+ RP+S+ RR+F+R AP VGF + IS + + AL G+E AH GAH+ RHSL Sbjct: 305 DYLRHDRPRSATRRVFLRNRAPLVGFGNSSTISSLVRRALKHAGVE-SAHTGAHVLRHSL 363 Query: 121 ATELLRSGATLSEIGQLLRHENHDTTRIYAKVDIDALRTLSLPWPGG 167 AT LLR G +L EIG+LLRH++ +TT IYAKVD+ AL TL+LPWPGG Sbjct: 364 ATSLLRQGGSLDEIGELLRHQSPNTTAIYAKVDVTALHTLALPWPGG 410